RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 CHMLP26374 656 aa11.89□□□□□ -0.51
PHC1-208ENST00000540574 CABP4P57796 275 aa11.89□□□□□ -0.51
PHC1-208ENST00000540574 STK11IPQ8N1F8 1099 aa11.89□□□□□ -0.51
PHC1-208ENST00000540574 UBE3BQ7Z3V4 1068 aa11.88□□□□□ -0.51
PHC1-208ENST00000540574 KCNH5Q8NCM2 988 aa11.88□□□□□ -0.51
PHC1-208ENST00000540574 TBX22Q9Y458 520 aa11.88□□□□□ -0.51
PHC1-208ENST00000540574 FRMPD1Q5SYB0 1578 aa11.88□□□□□ -0.51
PHC1-208ENST00000540574 RBM10P98175 930 aaKnown RBP11.88□□□□□ -0.51
PHC1-208ENST00000540574 COPS6Q7L5N1 327 aa11.88□□□□□ -0.51
PHC1-208ENST00000540574 BICD2Q8TD16 824 aa11.88□□□□□ -0.51
PHC1-208ENST00000540574 LRRC2Q9BYS8 371 aa11.88□□□□□ -0.51
PHC1-208ENST00000540574 FAM13BQ9NYF5 915 aa11.88□□□□□ -0.51
PHC1-208ENST00000540574 IQSEC2Q5JU85 1478 aa11.88□□□□□ -0.51
PHC1-208ENST00000540574 DIP2CQ9Y2E4 1556 aa11.88□□□□□ -0.51
PHC1-208ENST00000540574 PDRG1Q9NUG6 133 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 CYP46A1Q9Y6A2 500 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 PNPLA6Q8IY17 1366 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 PRIM1P49642 420 aaKnown RBP11.87□□□□□ -0.51
PHC1-208ENST00000540574 KIAA2012Q0VF49 1180 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 WASHC4Q2M389 1173 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 SPC24Q8NBT2 197 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 ZBTB3Q9H5J0 574 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 ARHGAP31Q2M1Z3 1444 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 SETBP1Q9Y6X0 1596 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 MAP3K5Q99683 1374 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 CAMK4Q16566 473 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 PROSER3Q2NL68 480 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 ZSCAN23Q3MJ62 389 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 PRDM11Q9NQV5 511 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 NRXN1Q9ULB1 1477 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 PIK3C2BO00750 1634 aa11.87□□□□□ -0.51
PHC1-208ENST00000540574 GLRX3O76003 335 aaKnown RBP11.86□□□□□ -0.51
PHC1-208ENST00000540574 APPP05067 770 aa11.86□□□□□ -0.51
PHC1-208ENST00000540574 XAGE3Q8WTP9 111 aa11.86□□□□□ -0.51
PHC1-208ENST00000540574 EDC3Q96F86 508 aaKnown RBP11.86□□□□□ -0.51
PHC1-208ENST00000540574 SBNO1A3KN83 1393 aa11.86□□□□□ -0.51
PHC1-208ENST00000540574 LMTK2Q8IWU2 1503 aa11.86□□□□□ -0.51
PHC1-208ENST00000540574 RAB11FIP3O75154 756 aa11.86□□□□□ -0.51
PHC1-208ENST00000540574 LARP1BQ659C4 914 aaKnown RBP11.86□□□□□ -0.51
PHC1-208ENST00000540574 TFIP11Q9UBB9 837 aaKnown RBP11.86□□□□□ -0.51
PHC1-208ENST00000540574 VWDEQ8N2E2 1590 aa11.86□□□□□ -0.51
PHC1-208ENST00000540574 ARHGEF40Q8TER5 1519 aa11.86□□□□□ -0.51
PHC1-208ENST00000540574 FKBP4Q02790 459 aaKnown RBP eCLIP11.86□□□□□ -0.51
PHC1-208ENST00000540574 CPS1P31327 1500 aa11.86□□□□□ -0.51
PHC1-208ENST00000540574 MCM2P49736 904 aa11.86□□□□□ -0.51
PHC1-208ENST00000540574 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.86□□□□□ -0.51
PHC1-208ENST00000540574 A0A087WZG4 1122 aa11.85□□□□□ -0.51
PHC1-208ENST00000540574 NPHP1O15259 732 aa11.85□□□□□ -0.51
PHC1-208ENST00000540574 GNL2Q13823 731 aaKnown RBP11.85□□□□□ -0.51
PHC1-208ENST00000540574 NCBP3Q53F19 620 aaKnown RBP11.85□□□□□ -0.51
PHC1-208ENST00000540574 CFAP74Q9C0B2 1584 aa11.85□□□□□ -0.51
PHC1-208ENST00000540574 DEPDC5O75140 1603 aa11.85□□□□□ -0.51
PHC1-208ENST00000540574 HSP90AA2PQ14568 343 aaPredicted RBP11.85□□□□□ -0.51
PHC1-208ENST00000540574 KLHL40Q2TBA0 621 aa11.85□□□□□ -0.51
PHC1-208ENST00000540574 RNF20Q5VTR2 975 aa11.85□□□□□ -0.51
PHC1-208ENST00000540574 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
PHC1-208ENST00000540574 KIF2CQ99661 725 aa11.85□□□□□ -0.51
PHC1-208ENST00000540574 SNRKQ9NRH2 765 aa11.85□□□□□ -0.51
PHC1-208ENST00000540574 ECHDC1Q9NTX5 307 aa11.85□□□□□ -0.51
PHC1-208ENST00000540574 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
PHC1-208ENST00000540574 DDX46Q7L014 1031 aaKnown RBP11.85□□□□□ -0.51
PHC1-208ENST00000540574 ATP7BP35670 1465 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 HSPA2P54652 639 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 GLIPR1L2Q4G1C9 344 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 BLOC1S2Q6QNY1 142 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 RAB11FIP4Q86YS3 637 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 IP6K1Q92551 441 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 ATP6V1DQ9Y5K8 247 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 WDR33Q9C0J8 1336 aaKnown RBP11.84□□□□□ -0.51
PHC1-208ENST00000540574 USP6P35125 1406 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 PHF14O94880 888 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 GUCY1B3Q02153 619 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 ZNF830Q96NB3 372 aaPredicted RBP11.84□□□□□ -0.51
PHC1-208ENST00000540574 TSPY26PQ9H489 355 aa11.84□□□□□ -0.51
PHC1-208ENST00000540574 AATKQ6ZMQ8 1374 aa11.83□□□□□ -0.51
PHC1-208ENST00000540574 MBD3O95983 291 aa11.83□□□□□ -0.52
PHC1-208ENST00000540574 AK2P54819 239 aa11.83□□□□□ -0.52
PHC1-208ENST00000540574 CCDC173Q0VFZ6 552 aa11.83□□□□□ -0.52
PHC1-208ENST00000540574 BICC1Q9H694 974 aaKnown RBP11.83□□□□□ -0.52
PHC1-208ENST00000540574 CD163L1Q9NR16 1453 aa11.83□□□□□ -0.52
PHC1-208ENST00000540574 ZC3H13Q5T200 1668 aaKnown RBP11.83□□□□□ -0.52
PHC1-208ENST00000540574 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.52
PHC1-208ENST00000540574 MYO3AQ8NEV4 1616 aa11.83□□□□□ -0.52
PHC1-208ENST00000540574 SF3A1Q15459 793 aaKnown RBP11.83□□□□□ -0.52
PHC1-208ENST00000540574 FAM227BQ96M60 508 aa11.83□□□□□ -0.52
PHC1-208ENST00000540574 PPLO60437 1756 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 GJB2P29033 226 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 AKAP4Q5JQC9 854 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 USP25Q9UHP3 1055 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 KIAA1210Q9ULL0 1709 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 GRM8O00222 908 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 RNMTO43148 476 aaKnown RBP11.82□□□□□ -0.52
PHC1-208ENST00000540574 BRPF1P55201 1214 aaPredicted RBP11.82□□□□□ -0.52
PHC1-208ENST00000540574 USP48Q86UV5 1035 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 ERC1Q8IUD2 1116 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 CHMP4CQ96CF2 233 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 LIMCH1Q9UPQ0 1083 aa11.82□□□□□ -0.52
PHC1-208ENST00000540574 MAP2P11137 1827 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms