RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SBF1O95248 1867 aa12.4□□□□□ -0.42
TRAPPC1-202ENST00000540486 RASSF7Q02833 373 aa12.39□□□□□ -0.43
TRAPPC1-202ENST00000540486 COG3Q96JB2 828 aa12.39□□□□□ -0.43
TRAPPC1-202ENST00000540486 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
TRAPPC1-202ENST00000540486 C4AP0C0L4 1744 aa12.39□□□□□ -0.43
TRAPPC1-202ENST00000540486 TMEM88BA6NKF7 163 aa12.38□□□□□ -0.43
TRAPPC1-202ENST00000540486 RPS6KA4O75676 772 aa12.38□□□□□ -0.43
TRAPPC1-202ENST00000540486 CHRNA5P30532 468 aa12.38□□□□□ -0.43
TRAPPC1-202ENST00000540486 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
TRAPPC1-202ENST00000540486 TMC1Q8TDI8 760 aa12.38□□□□□ -0.43
TRAPPC1-202ENST00000540486 TMOD3Q9NYL9 352 aa12.38□□□□□ -0.43
TRAPPC1-202ENST00000540486 ASAP1Q9ULH1 1129 aa12.38□□□□□ -0.43
TRAPPC1-202ENST00000540486 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
TRAPPC1-202ENST00000540486 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
TRAPPC1-202ENST00000540486 MAP2P11137 1827 aaKnown RBP12.37□□□□□ -0.43
TRAPPC1-202ENST00000540486 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
TRAPPC1-202ENST00000540486 SLC12A5Q9H2X9 1139 aa12.36□□□□□ -0.43
TRAPPC1-202ENST00000540486 ATG3Q9NT62 314 aa12.35□□□□□ -0.43
TRAPPC1-202ENST00000540486 CNTNAP4Q9C0A0 1308 aa12.35□□□□□ -0.43
TRAPPC1-202ENST00000540486 FBLN1P23142 703 aa12.34□□□□□ -0.43
TRAPPC1-202ENST00000540486 DEFB115Q30KQ5 88 aa12.34□□□□□ -0.43
TRAPPC1-202ENST00000540486 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
TRAPPC1-202ENST00000540486 ITGB4P16144 1822 aa12.33□□□□□ -0.44
TRAPPC1-202ENST00000540486 ST20-MTHFSA0A0A6YYL1 179 aa12.33□□□□□ -0.44
TRAPPC1-202ENST00000540486 RASSF10A6NK89 507 aa12.33□□□□□ -0.44
TRAPPC1-202ENST00000540486 LDHDQ86WU2 507 aa12.33□□□□□ -0.44
TRAPPC1-202ENST00000540486 TTLL6Q8N841 843 aa12.33□□□□□ -0.44
TRAPPC1-202ENST00000540486 PDE4DIPQ5VU43 2346 aa12.32□□□□□ -0.44
TRAPPC1-202ENST00000540486 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
TRAPPC1-202ENST00000540486 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
TRAPPC1-202ENST00000540486 DDR1Q08345 913 aa12.32□□□□□ -0.44
TRAPPC1-202ENST00000540486 CFAP44Q96MT7 982 aa12.32□□□□□ -0.44
TRAPPC1-202ENST00000540486 TESK2Q96S53 571 aa12.32□□□□□ -0.44
TRAPPC1-202ENST00000540486 BEGAINQ9BUH8 593 aa12.32□□□□□ -0.44
TRAPPC1-202ENST00000540486 RGPD2P0DJD1 1756 aa12.32□□□□□ -0.44
TRAPPC1-202ENST00000540486 WDR33Q9C0J8 1336 aaKnown RBP12.32□□□□□ -0.44
TRAPPC1-202ENST00000540486 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
TRAPPC1-202ENST00000540486 IQCA1LA6NCM1 817 aa12.31□□□□□ -0.44
TRAPPC1-202ENST00000540486 NFKBIEO00221 500 aa12.31□□□□□ -0.44
TRAPPC1-202ENST00000540486 POLRMTO00411 1230 aaKnown RBP12.31□□□□□ -0.44
TRAPPC1-202ENST00000540486 ITGBL1O95965 494 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC1-202ENST00000540486 TM4SF1P30408 202 aa12.31□□□□□ -0.44
TRAPPC1-202ENST00000540486 ERFEQ4G0M1 354 aa12.31□□□□□ -0.44
TRAPPC1-202ENST00000540486 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
TRAPPC1-202ENST00000540486 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC1-202ENST00000540486 RRS1Q15050 365 aaKnown RBP12.3□□□□□ -0.44
TRAPPC1-202ENST00000540486 SLC4A9Q96Q91 983 aa12.3□□□□□ -0.44
TRAPPC1-202ENST00000540486 INSRP06213 1382 aa12.3□□□□□ -0.44
TRAPPC1-202ENST00000540486 KDRP35968 1356 aa12.3□□□□□ -0.44
TRAPPC1-202ENST00000540486 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
TRAPPC1-202ENST00000540486 IFNL2Q8IZJ0 200 aa12.29□□□□□ -0.44
TRAPPC1-202ENST00000540486 SPOCK2Q92563 424 aa12.29□□□□□ -0.44
TRAPPC1-202ENST00000540486 VIRMAQ69YN4 1812 aaKnown RBP12.29□□□□□ -0.44
TRAPPC1-202ENST00000540486 USP42Q9H9J4 1324 aaKnown RBP12.29□□□□□ -0.44
TRAPPC1-202ENST00000540486 DDNO94850 711 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC1-202ENST00000540486 NUBP1P53384 320 aa12.28□□□□□ -0.44
TRAPPC1-202ENST00000540486 SRP68Q9UHB9 627 aaKnown RBP12.28□□□□□ -0.44
TRAPPC1-202ENST00000540486 H0YIN7 160 aa12.27□□□□□ -0.45
TRAPPC1-202ENST00000540486 PRPF38BQ5VTL8 546 aaKnown RBP12.27□□□□□ -0.45
TRAPPC1-202ENST00000540486 L3MBTL3Q96JM7 780 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC1-202ENST00000540486 MCOLN1Q9GZU1 580 aa12.27□□□□□ -0.45
TRAPPC1-202ENST00000540486 TAF1DQ9H5J8 278 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC1-202ENST00000540486 KIF24Q5T7B8 1368 aa12.27□□□□□ -0.45
TRAPPC1-202ENST00000540486 ERVV-2B6SEH9 535 aa12.26□□□□□ -0.45
TRAPPC1-202ENST00000540486 PHKG2P15735 406 aa12.26□□□□□ -0.45
TRAPPC1-202ENST00000540486 ECE1P42892 770 aa12.26□□□□□ -0.45
TRAPPC1-202ENST00000540486 TNRC18O15417 2968 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC1-202ENST00000540486 ZPR1O75312 459 aa12.25□□□□□ -0.45
TRAPPC1-202ENST00000540486 CRKLP46109 303 aaKnown RBP12.25□□□□□ -0.45
TRAPPC1-202ENST00000540486 C2CD5Q86YS7 1000 aa12.25□□□□□ -0.45
TRAPPC1-202ENST00000540486 PDZRN3Q9UPQ7 1066 aa12.25□□□□□ -0.45
TRAPPC1-202ENST00000540486 LTBP3Q9NS15 1303 aa12.25□□□□□ -0.45
TRAPPC1-202ENST00000540486 FLT4P35916 1363 aa12.25□□□□□ -0.45
TRAPPC1-202ENST00000540486 ZNF831Q5JPB2 1677 aa12.25□□□□□ -0.45
TRAPPC1-202ENST00000540486 TIAM2Q8IVF5 1701 aa12.25□□□□□ -0.45
TRAPPC1-202ENST00000540486 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
TRAPPC1-202ENST00000540486 CA12O43570 354 aa12.24□□□□□ -0.45
TRAPPC1-202ENST00000540486 GPR101Q96P66 508 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-202ENST00000540486 ABT1Q9ULW3 272 aaKnown RBP12.24□□□□□ -0.45
TRAPPC1-202ENST00000540486 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC1-202ENST00000540486 PNMA8AQ86V59 439 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC1-202ENST00000540486 CNTROBQ8N137 903 aa12.23□□□□□ -0.45
TRAPPC1-202ENST00000540486 CAPNS2Q96L46 248 aa12.23□□□□□ -0.45
TRAPPC1-202ENST00000540486 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
TRAPPC1-202ENST00000540486 FYB1O15117 783 aa12.22□□□□□ -0.45
TRAPPC1-202ENST00000540486 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
TRAPPC1-202ENST00000540486 SERPINB2P05120 415 aa12.22□□□□□ -0.45
TRAPPC1-202ENST00000540486 HSPA5P11021 654 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-202ENST00000540486 MAP2K2P36507 400 aa12.22□□□□□ -0.45
TRAPPC1-202ENST00000540486 TAOK3Q9H2K8 898 aa12.22□□□□□ -0.45
TRAPPC1-202ENST00000540486 CCDC88AQ3V6T2 1871 aa12.21□□□□□ -0.45
TRAPPC1-202ENST00000540486 C21orf2O43822 256 aa12.21□□□□□ -0.45
TRAPPC1-202ENST00000540486 HSP90AB1P08238 724 aaKnown RBP12.21□□□□□ -0.45
TRAPPC1-202ENST00000540486 EIF4G2P78344 907 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAPPC1-202ENST00000540486 DGKZQ13574 1117 aa12.21□□□□□ -0.45
TRAPPC1-202ENST00000540486 NFIXQ14938 502 aa12.21□□□□□ -0.45
TRAPPC1-202ENST00000540486 USPL1Q5W0Q7 1092 aa12.21□□□□□ -0.45
TRAPPC1-202ENST00000540486 HACL1Q9UJ83 578 aa12.21□□□□□ -0.45
TRAPPC1-202ENST00000540486 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
TRAPPC1-202ENST00000540486 GGNBP2Q9H3C7 697 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms