RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 CAVIN1Q6NZI2 390 aaKnown RBP18.45■□□□□ 0.54
GABARAPL1-208ENST00000540424 G2E3Q7L622 706 aa18.45■□□□□ 0.54
GABARAPL1-208ENST00000540424 PRIM1P49642 420 aaKnown RBP18.44■□□□□ 0.54
GABARAPL1-208ENST00000540424 IL17REQ8NFR9 667 aa18.44■□□□□ 0.54
GABARAPL1-208ENST00000540424 FKBP5Q13451 457 aaPredicted RBP18.43■□□□□ 0.54
GABARAPL1-208ENST00000540424 ESCO1Q5FWF5 840 aa18.43■□□□□ 0.54
GABARAPL1-208ENST00000540424 KIF2CQ99661 725 aa18.43■□□□□ 0.54
GABARAPL1-208ENST00000540424 ATP2B3Q16720 1220 aa18.43■□□□□ 0.54
GABARAPL1-208ENST00000540424 LMBRD1Q9NUN5 540 aa18.43■□□□□ 0.54
GABARAPL1-208ENST00000540424 PXDNLA1KZ92 1463 aa18.42■□□□□ 0.54
GABARAPL1-208ENST00000540424 F6X3S4 739 aa18.42■□□□□ 0.54
GABARAPL1-208ENST00000540424 NFAT5O94916 1531 aa18.42■□□□□ 0.54
GABARAPL1-208ENST00000540424 FAM208AQ9UK61 1670 aaKnown RBP18.42■□□□□ 0.54
GABARAPL1-208ENST00000540424 NPHP4O75161 1426 aaPredicted RBP18.41■□□□□ 0.54
GABARAPL1-208ENST00000540424 LTN1O94822 1766 aa18.41■□□□□ 0.54
GABARAPL1-208ENST00000540424 NUCB2P80303 420 aa18.4■□□□□ 0.54
GABARAPL1-208ENST00000540424 LRSAM1Q6UWE0 723 aa18.4■□□□□ 0.54
GABARAPL1-208ENST00000540424 C16orf71Q8IYS4 520 aaPredicted RBP18.4■□□□□ 0.54
GABARAPL1-208ENST00000540424 HOXB7P09629 217 aa18.39■□□□□ 0.53
GABARAPL1-208ENST00000540424 MCTP1Q6DN14 999 aa18.39■□□□□ 0.53
GABARAPL1-208ENST00000540424 OSBPL3Q9H4L5 887 aa18.39■□□□□ 0.53
GABARAPL1-208ENST00000540424 FOXD4L1Q9NU39 408 aa18.39■□□□□ 0.53
GABARAPL1-208ENST00000540424 CEMIPQ8WUJ3 1361 aa18.39■□□□□ 0.53
GABARAPL1-208ENST00000540424 CACNA1FO60840 1977 aa18.39■□□□□ 0.53
GABARAPL1-208ENST00000540424 PHRF1Q9P1Y6 1649 aaKnown RBP18.39■□□□□ 0.53
GABARAPL1-208ENST00000540424 CD2BP2O95400 341 aaKnown RBP18.39■□□□□ 0.53
GABARAPL1-208ENST00000540424 RABEP1Q15276 862 aa18.38■□□□□ 0.53
GABARAPL1-208ENST00000540424 HDGFL1Q5TGJ6 251 aa18.38■□□□□ 0.53
GABARAPL1-208ENST00000540424 USHBP1Q8N6Y0 703 aa18.38■□□□□ 0.53
GABARAPL1-208ENST00000540424 KIF3AQ9Y496 699 aa18.38■□□□□ 0.53
GABARAPL1-208ENST00000540424 APBB1O00213 710 aa18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 SMARCA5O60264 1052 aaPredicted RBP18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 CYP2E1P05181 493 aaPredicted RBP18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 SDSP20132 328 aa18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 AMOTQ4VCS5 1084 aa18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 DNTTIP2Q5QJE6 756 aaKnown RBP18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 REC8O95072 547 aa18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 ATP8B2P98198 1209 aa18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 NBPF6Q5VWK0 638 aa18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 NBPF4Q96M43 638 aa18.37■□□□□ 0.53
GABARAPL1-208ENST00000540424 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.37■□□□□ 0.539e-6■■■■□ 20.1
GABARAPL1-208ENST00000540424 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
GABARAPL1-208ENST00000540424 PIBF1Q8WXW3 757 aa18.35■□□□□ 0.53
GABARAPL1-208ENST00000540424 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
GABARAPL1-208ENST00000540424 OTUD7AQ8TE49 926 aaPredicted RBP18.35■□□□□ 0.53
GABARAPL1-208ENST00000540424 NECTIN2Q92692 538 aa18.35■□□□□ 0.53
GABARAPL1-208ENST00000540424 N4BP2Q86UW6 1770 aaPredicted RBP18.34■□□□□ 0.53
GABARAPL1-208ENST00000540424 PDCL2Q8N4E4 241 aa18.34■□□□□ 0.53
GABARAPL1-208ENST00000540424 USP26Q9BXU7 913 aa18.34■□□□□ 0.53
GABARAPL1-208ENST00000540424 MED1Q15648 1581 aaPredicted RBP18.34■□□□□ 0.53
GABARAPL1-208ENST00000540424 NCAPD2Q15021 1401 aa18.34■□□□□ 0.53
GABARAPL1-208ENST00000540424 PTMAP06454 111 aaKnown RBP18.34■□□□□ 0.53
GABARAPL1-208ENST00000540424 UBTFL1P0CB47 393 aaPredicted RBP18.34■□□□□ 0.53
GABARAPL1-208ENST00000540424 PDE1AP54750 535 aa18.34■□□□□ 0.53
GABARAPL1-208ENST00000540424 TEFQ10587 303 aa18.34■□□□□ 0.53
GABARAPL1-208ENST00000540424 RBM33Q96EV2 1170 aaKnown RBP18.33■□□□□ 0.53
GABARAPL1-208ENST00000540424 ZNF830Q96NB3 372 aaPredicted RBP18.33■□□□□ 0.53
GABARAPL1-208ENST00000540424 SRCIN1Q9C0H9 1055 aa18.33■□□□□ 0.53
GABARAPL1-208ENST00000540424 ZBTB7CA1YPR0 619 aa18.33■□□□□ 0.52
GABARAPL1-208ENST00000540424 GCP02774 474 aa18.33■□□□□ 0.52
GABARAPL1-208ENST00000540424 EIF4A1P60842 406 aaKnown RBP18.33■□□□□ 0.52
GABARAPL1-208ENST00000540424 JARID2Q92833 1246 aaPredicted RBP18.33■□□□□ 0.52
GABARAPL1-208ENST00000540424 BCL2L12Q9HB09 334 aa18.33■□□□□ 0.52
GABARAPL1-208ENST00000540424 SLIT3O75094 1523 aa18.33■□□□□ 0.52
GABARAPL1-208ENST00000540424 ERC2O15083 957 aa18.32■□□□□ 0.52
GABARAPL1-208ENST00000540424 GPT2Q8TD30 523 aa18.32■□□□□ 0.52
GABARAPL1-208ENST00000540424 TSC1Q92574 1164 aa18.32■□□□□ 0.52
GABARAPL1-208ENST00000540424 FEZ1Q99689 392 aa18.32■□□□□ 0.52
GABARAPL1-208ENST00000540424 OVOS2A0A0G2JMS6 1433 aa18.32■□□□□ 0.52
GABARAPL1-208ENST00000540424 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
GABARAPL1-208ENST00000540424 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
GABARAPL1-208ENST00000540424 ARHGEF25Q86VW2 580 aa18.32■□□□□ 0.52
GABARAPL1-208ENST00000540424 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
GABARAPL1-208ENST00000540424 CGNQ9P2M7 1197 aaKnown RBP18.31■□□□□ 0.52
GABARAPL1-208ENST00000540424 EXOC6BQ9Y2D4 811 aa18.31■□□□□ 0.52
GABARAPL1-208ENST00000540424 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
GABARAPL1-208ENST00000540424 CDK11BP21127 795 aaKnown RBP18.31■□□□□ 0.52
GABARAPL1-208ENST00000540424 LRRFIP2Q9Y608 721 aaKnown RBP18.31■□□□□ 0.52
GABARAPL1-208ENST00000540424 ANKRD7Q92527 254 aa18.3■□□□□ 0.52
GABARAPL1-208ENST00000540424 USP44Q9H0E7 712 aa18.3■□□□□ 0.52
GABARAPL1-208ENST00000540424 SPTLC3Q9NUV7 552 aa18.3■□□□□ 0.52
GABARAPL1-208ENST00000540424 RBM27Q9P2N5 1060 aaKnown RBP18.3■□□□□ 0.52
GABARAPL1-208ENST00000540424 BTBD11A6QL63 1104 aa18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 ST18O60284 1047 aa18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 RAB11FIP3O75154 756 aa18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 MX1P20591 662 aa18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 GABPB1Q06547 395 aaPredicted RBP18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 AK9Q5TCS8 1911 aa18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 AOX1Q06278 1338 aa18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 SLC20A2Q08357 652 aa18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 LGR6Q9HBX8 967 aa18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 TMEM63CQ9P1W3 806 aa18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 KDM3BQ7LBC6 1761 aa18.29■□□□□ 0.52
GABARAPL1-208ENST00000540424 KIF1AQ12756 1690 aa18.28■□□□□ 0.52
GABARAPL1-208ENST00000540424 PNMA6EA0A0J9YXQ4 647 aa18.28■□□□□ 0.52
GABARAPL1-208ENST00000540424 SYCE3A1L190 88 aa18.28■□□□□ 0.52
GABARAPL1-208ENST00000540424 SPDYE4A6NLX3 237 aa18.28■□□□□ 0.52
GABARAPL1-208ENST00000540424 ZNF771Q7L3S4 317 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms