RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 THUMPD2Q9BTF0 503 aaKnown RBP17.6■□□□□ 0.41
CCDC130-202ENST00000540216 FHDC1Q9C0D6 1143 aaPredicted RBP17.6■□□□□ 0.41
CCDC130-202ENST00000540216 MRS2Q9HD23 443 aa17.6■□□□□ 0.41
CCDC130-202ENST00000540216 SNRPA1P09661 255 aaKnown RBP17.59■□□□□ 0.41
CCDC130-202ENST00000540216 NLGN1Q8N2Q7 840 aa17.59■□□□□ 0.41
CCDC130-202ENST00000540216 BABAM1Q9NWV8 329 aa17.59■□□□□ 0.41
CCDC130-202ENST00000540216 ZBTB1Q9Y2K1 713 aa17.59■□□□□ 0.41
CCDC130-202ENST00000540216 COL15A1P39059 1388 aa17.58■□□□□ 0.4
CCDC130-202ENST00000540216 USP42Q9H9J4 1324 aaKnown RBP17.58■□□□□ 0.4
CCDC130-202ENST00000540216 CCDC184Q52MB2 194 aa17.58■□□□□ 0.4
CCDC130-202ENST00000540216 RRP7AQ9Y3A4 280 aaKnown RBP17.58■□□□□ 0.4
CCDC130-202ENST00000540216 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
CCDC130-202ENST00000540216 SYT17Q9BSW7 474 aa17.57■□□□□ 0.4
CCDC130-202ENST00000540216 A0A087WZG4 1122 aa17.56■□□□□ 0.4
CCDC130-202ENST00000540216 GYS1P13807 737 aa17.56■□□□□ 0.4
CCDC130-202ENST00000540216 MIS18AQ9NYP9 233 aa17.56■□□□□ 0.4
CCDC130-202ENST00000540216 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
CCDC130-202ENST00000540216 LAMB4A4D0S4 1761 aa17.56■□□□□ 0.4
CCDC130-202ENST00000540216 ZPR1O75312 459 aa17.55■□□□□ 0.4
CCDC130-202ENST00000540216 CANXP27824 592 aaKnown RBP17.55■□□□□ 0.4
CCDC130-202ENST00000540216 IL6STP40189 918 aaPredicted RBP17.55■□□□□ 0.4
CCDC130-202ENST00000540216 EIF5P55010 431 aaKnown RBP17.55■□□□□ 0.4
CCDC130-202ENST00000540216 TSPYL4Q9UJ04 414 aa17.55■□□□□ 0.4
CCDC130-202ENST00000540216 APAF1O14727 1248 aa17.54■□□□□ 0.4
CCDC130-202ENST00000540216 MMP10P09238 476 aa17.54■□□□□ 0.4
CCDC130-202ENST00000540216 EIF4A1P60842 406 aaKnown RBP17.54■□□□□ 0.4
CCDC130-202ENST00000540216 NPM2Q86SE8 214 aaKnown RBP17.54■□□□□ 0.4
CCDC130-202ENST00000540216 NARFQ9UHQ1 456 aa17.54■□□□□ 0.4
CCDC130-202ENST00000540216 DCAF8L1A6NGE4 600 aa17.53■□□□□ 0.4
CCDC130-202ENST00000540216 CD2APQ9Y5K6 639 aa17.53■□□□□ 0.4
CCDC130-202ENST00000540216 USP16Q9Y5T5 823 aa17.53■□□□□ 0.4
CCDC130-202ENST00000540216 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.4
CCDC130-202ENST00000540216 A1BGP04217 495 aa17.52■□□□□ 0.4
CCDC130-202ENST00000540216 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
CCDC130-202ENST00000540216 KLHL34Q8N239 644 aa17.52■□□□□ 0.4
CCDC130-202ENST00000540216 SRP68Q9UHB9 627 aaKnown RBP17.52■□□□□ 0.4
CCDC130-202ENST00000540216 PRAMEF22A3QJZ6 481 aa17.51■□□□□ 0.39
CCDC130-202ENST00000540216 CHL1O00533 1208 aa17.51■□□□□ 0.39
CCDC130-202ENST00000540216 USPL1Q5W0Q7 1092 aa17.51■□□□□ 0.39
CCDC130-202ENST00000540216 SCN7AQ01118 1682 aa17.51■□□□□ 0.39
CCDC130-202ENST00000540216 FKBP8Q14318 412 aa17.5■□□□□ 0.39
CCDC130-202ENST00000540216 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
CCDC130-202ENST00000540216 NCBP3Q53F19 620 aaKnown RBP17.49■□□□□ 0.39
CCDC130-202ENST00000540216 CFAP44Q96MT7 982 aa17.49■□□□□ 0.39
CCDC130-202ENST00000540216 ERBB4Q15303 1308 aa17.48■□□□□ 0.39
CCDC130-202ENST00000540216 ZNF330Q9Y3S2 320 aaPredicted RBP17.48■□□□□ 0.39
CCDC130-202ENST00000540216 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
CCDC130-202ENST00000540216 RGL2O15211 777 aa17.47■□□□□ 0.39
CCDC130-202ENST00000540216 TM4SF1P30408 202 aa17.47■□□□□ 0.39
CCDC130-202ENST00000540216 CCDC27Q2M243 656 aa17.47■□□□□ 0.39
CCDC130-202ENST00000540216 NLGN2Q8NFZ4 835 aa17.47■□□□□ 0.39
CCDC130-202ENST00000540216 IFT57Q9NWB7 429 aa17.47■□□□□ 0.39
CCDC130-202ENST00000540216 KIF13BQ9NQT8 1826 aa17.47■□□□□ 0.39
CCDC130-202ENST00000540216 BCORQ6W2J9 1755 aa17.46■□□□□ 0.39
CCDC130-202ENST00000540216 NBPF26B4DH59 902 aa17.46■□□□□ 0.39
CCDC130-202ENST00000540216 GNAI1P63096 354 aa17.46■□□□□ 0.39
CCDC130-202ENST00000540216 NBPF10Q6P3W6 841 aaKnown RBP17.46■□□□□ 0.39
CCDC130-202ENST00000540216 DZIP3Q86Y13 1208 aaKnown RBP17.46■□□□□ 0.39
CCDC130-202ENST00000540216 NBPF15Q8N660 670 aa17.46■□□□□ 0.39
CCDC130-202ENST00000540216 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
CCDC130-202ENST00000540216 LAS1LQ9Y4W2 734 aaKnown RBP17.46■□□□□ 0.39
CCDC130-202ENST00000540216 HOXB7P09629 217 aa17.45■□□□□ 0.38
CCDC130-202ENST00000540216 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
CCDC130-202ENST00000540216 DDR1Q08345 913 aa17.45■□□□□ 0.38
CCDC130-202ENST00000540216 NFIXQ14938 502 aa17.45■□□□□ 0.38
CCDC130-202ENST00000540216 TBC1D2BQ9UPU7 963 aa17.45■□□□□ 0.38
CCDC130-202ENST00000540216 POLRMTO00411 1230 aaKnown RBP17.44■□□□□ 0.38
CCDC130-202ENST00000540216 CAMTA2O94983 1202 aa17.44■□□□□ 0.38
CCDC130-202ENST00000540216 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
CCDC130-202ENST00000540216 CLEC4GQ6UXB4 293 aa17.43■□□□□ 0.38
CCDC130-202ENST00000540216 NGEFQ8N5V2 710 aa17.43■□□□□ 0.38
CCDC130-202ENST00000540216 MBIPQ9NS73 344 aa17.43■□□□□ 0.38
CCDC130-202ENST00000540216 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
CCDC130-202ENST00000540216 NRXN2Q9P2S2 1712 aa17.42■□□□□ 0.38
CCDC130-202ENST00000540216 TGFB2P61812 414 aa17.42■□□□□ 0.38
CCDC130-202ENST00000540216 WWC1Q8IX03 1113 aa17.42■□□□□ 0.38
CCDC130-202ENST00000540216 FAM9BQ8IZU0 186 aa17.42■□□□□ 0.38
CCDC130-202ENST00000540216 CARMIL3Q8ND23 1372 aa17.41■□□□□ 0.38
CCDC130-202ENST00000540216 PXDNLA1KZ92 1463 aa17.41■□□□□ 0.38
CCDC130-202ENST00000540216 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
CCDC130-202ENST00000540216 EIF2S2P20042 333 aaKnown RBP17.4■□□□□ 0.38
CCDC130-202ENST00000540216 GPR162Q16538 588 aa17.4■□□□□ 0.38
CCDC130-202ENST00000540216 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
CCDC130-202ENST00000540216 IL16Q14005 1332 aa17.4■□□□□ 0.38
CCDC130-202ENST00000540216 KIAA1551Q9HCM1 1747 aa17.39■□□□□ 0.37
CCDC130-202ENST00000540216 ERVV-1B6SEH8 477 aa17.39■□□□□ 0.37
CCDC130-202ENST00000540216 SERPINB2P05120 415 aa17.39■□□□□ 0.37
CCDC130-202ENST00000540216 KIF6Q6ZMV9 814 aa17.39■□□□□ 0.37
CCDC130-202ENST00000540216 BICDL1Q6ZP65 573 aa17.39■□□□□ 0.37
CCDC130-202ENST00000540216 SETDB2Q96T68 719 aa17.39■□□□□ 0.37
CCDC130-202ENST00000540216 AFDNP55196 1824 aaKnown RBP17.39■□□□□ 0.37
CCDC130-202ENST00000540216 MYL6BP14649 208 aa17.38■□□□□ 0.37
CCDC130-202ENST00000540216 KRT24Q2M2I5 525 aa17.38■□□□□ 0.37
CCDC130-202ENST00000540216 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
CCDC130-202ENST00000540216 DUSP27Q5VZP5 1158 aa17.38■□□□□ 0.37
CCDC130-202ENST00000540216 CHMP4AQ9BY43 222 aa17.38■□□□□ 0.37
CCDC130-202ENST00000540216 MAP3K15Q6ZN16 1313 aa17.38■□□□□ 0.37
CCDC130-202ENST00000540216 GRIN3BO60391 1043 aa17.37■□□□□ 0.37
CCDC130-202ENST00000540216 PDIA6Q15084 440 aa17.37■□□□□ 0.37
CCDC130-202ENST00000540216 PELP1Q8IZL8 1130 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms