RNA–Protein interactions for RNA: ENST00000539859.1

LRTM2-203, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-203ENST00000539859 SULT6B1Q6IMI4 303 aa20.46■□□□□ 0.87
LRTM2-203ENST00000539859 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
LRTM2-203ENST00000539859 CREBZFQ9NS37 354 aa20.46■□□□□ 0.87
LRTM2-203ENST00000539859 TIAM2Q8IVF5 1701 aa20.45■□□□□ 0.86
LRTM2-203ENST00000539859 LMNB1P20700 586 aa20.45■□□□□ 0.86
LRTM2-203ENST00000539859 CTCFP49711 727 aaPredicted RBP20.45■□□□□ 0.86
LRTM2-203ENST00000539859 HMOX1P09601 288 aa20.44■□□□□ 0.86
LRTM2-203ENST00000539859 CHRNA5P30532 468 aa20.44■□□□□ 0.86
LRTM2-203ENST00000539859 ATG3Q9NT62 314 aa20.44■□□□□ 0.86
LRTM2-203ENST00000539859 KDRP35968 1356 aa20.44■□□□□ 0.86
LRTM2-203ENST00000539859 KDM6AO15550 1401 aaPredicted RBP20.44■□□□□ 0.86
LRTM2-203ENST00000539859 CNTNAP4Q9C0A0 1308 aa20.43■□□□□ 0.86
LRTM2-203ENST00000539859 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
LRTM2-203ENST00000539859 RC3H1Q5TC82 1133 aaKnown RBP20.42■□□□□ 0.86
LRTM2-203ENST00000539859 RBM42Q9BTD8 480 aaKnown RBP20.42■□□□□ 0.86
LRTM2-203ENST00000539859 RPS6KA4O75676 772 aa20.41■□□□□ 0.86
LRTM2-203ENST00000539859 ZNF831Q5JPB2 1677 aa20.41■□□□□ 0.86
LRTM2-203ENST00000539859 COL5A3P25940 1745 aaPredicted RBP20.41■□□□□ 0.86
LRTM2-203ENST00000539859 CNTNAP1P78357 1384 aa20.39■□□□□ 0.85
LRTM2-203ENST00000539859 IFNL2Q8IZJ0 200 aa20.39■□□□□ 0.85
LRTM2-203ENST00000539859 ABHD8Q96I13 439 aa20.39■□□□□ 0.85
LRTM2-203ENST00000539859 DDR1Q08345 913 aa20.38■□□□□ 0.85
LRTM2-203ENST00000539859 DPY19L2Q6NUT2 758 aa20.38■□□□□ 0.85
LRTM2-203ENST00000539859 PNISRQ8TF01 805 aaKnown RBP20.38■□□□□ 0.85
LRTM2-203ENST00000539859 MLLT1Q03111 559 aaPredicted RBP20.37■□□□□ 0.85
LRTM2-203ENST00000539859 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
LRTM2-203ENST00000539859 CHADLQ6NUI6 762 aa20.37■□□□□ 0.85
LRTM2-203ENST00000539859 PHKG2P15735 406 aa20.36■□□□□ 0.85
LRTM2-203ENST00000539859 FKBP8Q14318 412 aa20.36■□□□□ 0.85
LRTM2-203ENST00000539859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.36■□□□□ 0.85
LRTM2-203ENST00000539859 USP42Q9H9J4 1324 aaKnown RBP20.35■□□□□ 0.85
LRTM2-203ENST00000539859 LBX1P52954 281 aa20.35■□□□□ 0.85
LRTM2-203ENST00000539859 PLEKHO1Q53GL0 409 aaPredicted RBP20.35■□□□□ 0.85
LRTM2-203ENST00000539859 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
LRTM2-203ENST00000539859 SLC4A9Q96Q91 983 aa20.35■□□□□ 0.85
LRTM2-203ENST00000539859 SRP68Q9UHB9 627 aaKnown RBP20.35■□□□□ 0.85
LRTM2-203ENST00000539859 CENPBP07199 599 aaPredicted RBP20.34■□□□□ 0.85
LRTM2-203ENST00000539859 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
LRTM2-203ENST00000539859 U2AF1L5P0DN76 240 aaPredicted RBP20.33■□□□□ 0.85
LRTM2-203ENST00000539859 U2AF1Q01081 240 aaKnown RBP eCLIP20.33■□□□□ 0.85
LRTM2-203ENST00000539859 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
LRTM2-203ENST00000539859 POTECB2RU33 542 aa20.32■□□□□ 0.84
LRTM2-203ENST00000539859 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
LRTM2-203ENST00000539859 AMOTQ4VCS5 1084 aa20.32■□□□□ 0.84
LRTM2-203ENST00000539859 CCDC184Q52MB2 194 aa20.32■□□□□ 0.84
LRTM2-203ENST00000539859 CCDC88AQ3V6T2 1871 aa20.32■□□□□ 0.84
LRTM2-203ENST00000539859 MYH14Q7Z406 1995 aaKnown RBP20.31■□□□□ 0.84
LRTM2-203ENST00000539859 PRKAR2BP31323 418 aa20.3■□□□□ 0.84
LRTM2-203ENST00000539859 TTLL6Q8N841 843 aa20.3■□□□□ 0.84
LRTM2-203ENST00000539859 RSPH6AQ9H0K4 717 aa20.3■□□□□ 0.84
LRTM2-203ENST00000539859 PNNQ9H307 717 aaKnown RBP20.3■□□□□ 0.84
LRTM2-203ENST00000539859 DLEC1Q9Y238 1755 aa20.3■□□□□ 0.84
LRTM2-203ENST00000539859 CCDC85CA6NKD9 419 aa20.29■□□□□ 0.84
LRTM2-203ENST00000539859 CRKLP46109 303 aaKnown RBP20.29■□□□□ 0.84
LRTM2-203ENST00000539859 VEGFBP49765 207 aa20.29■□□□□ 0.84
LRTM2-203ENST00000539859 MTHFSDQ2M296 383 aaKnown RBP20.29■□□□□ 0.84
LRTM2-203ENST00000539859 C1orf141Q5JVX7 400 aa20.29■□□□□ 0.84
LRTM2-203ENST00000539859 WBP1LQ9NX94 342 aa20.29■□□□□ 0.84
LRTM2-203ENST00000539859 ERVV-2B6SEH9 535 aa20.28■□□□□ 0.84
LRTM2-203ENST00000539859 NFKBIEO00221 500 aa20.28■□□□□ 0.84
LRTM2-203ENST00000539859 NGEFQ8N5V2 710 aa20.28■□□□□ 0.84
LRTM2-203ENST00000539859 ZPR1O75312 459 aa20.27■□□□□ 0.84
LRTM2-203ENST00000539859 ERFEQ4G0M1 354 aa20.27■□□□□ 0.84
LRTM2-203ENST00000539859 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
LRTM2-203ENST00000539859 TMEM88BA6NKF7 163 aa20.26■□□□□ 0.83
LRTM2-203ENST00000539859 HSP90AB1P08238 724 aaKnown RBP20.26■□□□□ 0.83
LRTM2-203ENST00000539859 POTEIP0CG38 1075 aa20.26■□□□□ 0.83
LRTM2-203ENST00000539859 POTEJP0CG39 1038 aa20.26■□□□□ 0.83
LRTM2-203ENST00000539859 HSPA8P11142 646 aaKnown RBP20.26■□□□□ 0.83
LRTM2-203ENST00000539859 PHACTR3Q96KR7 559 aa20.26■□□□□ 0.83
LRTM2-203ENST00000539859 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
LRTM2-203ENST00000539859 PTCD1O75127 700 aaKnown RBP20.25■□□□□ 0.83
LRTM2-203ENST00000539859 TM4SF1P30408 202 aa20.25■□□□□ 0.83
LRTM2-203ENST00000539859 CABP4P57796 275 aa20.24■□□□□ 0.83
LRTM2-203ENST00000539859 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
LRTM2-203ENST00000539859 C2CD5Q86YS7 1000 aa20.24■□□□□ 0.83
LRTM2-203ENST00000539859 PASKQ96RG2 1323 aa20.24■□□□□ 0.83
LRTM2-203ENST00000539859 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
LRTM2-203ENST00000539859 IQCA1LA6NCM1 817 aa20.23■□□□□ 0.83
LRTM2-203ENST00000539859 H0YIN7 160 aa20.23■□□□□ 0.83
LRTM2-203ENST00000539859 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
LRTM2-203ENST00000539859 USPL1Q5W0Q7 1092 aa20.23■□□□□ 0.83
LRTM2-203ENST00000539859 LDHDQ86WU2 507 aa20.23■□□□□ 0.83
LRTM2-203ENST00000539859 DICER1Q9UPY3 1922 aaKnown RBP20.23■□□□□ 0.83
LRTM2-203ENST00000539859 RGS19P49795 217 aa20.22■□□□□ 0.83
LRTM2-203ENST00000539859 MAP2K1Q02750 393 aaPredicted RBP20.22■□□□□ 0.83
LRTM2-203ENST00000539859 LGR6Q9HBX8 967 aa20.22■□□□□ 0.83
LRTM2-203ENST00000539859 ZBED9Q6R2W3 1325 aa20.22■□□□□ 0.83
LRTM2-203ENST00000539859 CFAP44Q96MT7 982 aa20.21■□□□□ 0.83
LRTM2-203ENST00000539859 TJP1Q07157 1748 aa20.21■□□□□ 0.83
LRTM2-203ENST00000539859 SCN11AQ9UI33 1791 aa20.21■□□□□ 0.83
LRTM2-203ENST00000539859 NRXN2Q9P2S2 1712 aa20.2■□□□□ 0.82
LRTM2-203ENST00000539859 DDNO94850 711 aaPredicted RBP20.2■□□□□ 0.82
LRTM2-203ENST00000539859 NCBP3Q53F19 620 aaKnown RBP20.2■□□□□ 0.82
LRTM2-203ENST00000539859 GAS2L2Q8NHY3 880 aa20.2■□□□□ 0.82
LRTM2-203ENST00000539859 NEFMP07197 916 aa20.19■□□□□ 0.82
LRTM2-203ENST00000539859 NFIXQ14938 502 aa20.19■□□□□ 0.82
LRTM2-203ENST00000539859 ZNF219Q9P2Y4 722 aaPredicted RBP20.19■□□□□ 0.82
LRTM2-203ENST00000539859 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
LRTM2-203ENST00000539859 ADAMTS7Q9UKP4 1686 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms