RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 RGPD3A6NKT7 1758 aaPredicted RBP19.86■□□□□ 0.77
DDB1-216ENST00000539739 RGPD4Q7Z3J3 1758 aa19.86■□□□□ 0.77
DDB1-216ENST00000539739 VAMP4O75379 141 aa19.86■□□□□ 0.77
DDB1-216ENST00000539739 HDGFL1Q5TGJ6 251 aa19.86■□□□□ 0.77
DDB1-216ENST00000539739 ZNF831Q5JPB2 1677 aa19.85■□□□□ 0.77
DDB1-216ENST00000539739 CYP19A1P11511 503 aaPredicted RBP19.84■□□□□ 0.77
DDB1-216ENST00000539739 CCDC30Q5VVM6 783 aa19.84■□□□□ 0.77
DDB1-216ENST00000539739 LINC00116Q8NCU8 138 aa19.84■□□□□ 0.77
DDB1-216ENST00000539739 ZNF428Q96B54 188 aa19.84■□□□□ 0.77
DDB1-216ENST00000539739 NECTIN2Q92692 538 aa19.83■□□□□ 0.76
DDB1-216ENST00000539739 CRKLP46109 303 aaKnown RBP19.82■□□□□ 0.76
DDB1-216ENST00000539739 RC3H1Q5TC82 1133 aaKnown RBP19.82■□□□□ 0.76
DDB1-216ENST00000539739 STK31Q9BXU1 1019 aa19.82■□□□□ 0.76
DDB1-216ENST00000539739 ERBB4Q15303 1308 aa19.82■□□□□ 0.76
DDB1-216ENST00000539739 CICQ96RK0 1608 aaPredicted RBP19.82■□□□□ 0.76
DDB1-216ENST00000539739 A1BGP04217 495 aa19.81■□□□□ 0.76
DDB1-216ENST00000539739 CCDC87Q9NVE4 849 aa19.81■□□□□ 0.76
DDB1-216ENST00000539739 CNTNAP4Q9C0A0 1308 aa19.81■□□□□ 0.76
DDB1-216ENST00000539739 TJP1Q07157 1748 aa19.81■□□□□ 0.76
DDB1-216ENST00000539739 C5P01031 1676 aa19.8■□□□□ 0.76
DDB1-216ENST00000539739 AK7Q96M32 723 aa19.8■□□□□ 0.76
DDB1-216ENST00000539739 NPM2Q86SE8 214 aaKnown RBP19.8■□□□□ 0.76
DDB1-216ENST00000539739 DBF4Q9UBU7 674 aaPredicted RBP19.8■□□□□ 0.76
DDB1-216ENST00000539739 CANXP27824 592 aaKnown RBP19.79■□□□□ 0.76
DDB1-216ENST00000539739 INTS5Q6P9B9 1019 aaKnown RBP19.79■□□□□ 0.76
DDB1-216ENST00000539739 LAMB4A4D0S4 1761 aa19.79■□□□□ 0.76
DDB1-216ENST00000539739 ALDH1L2Q3SY69 923 aa19.78■□□□□ 0.76
DDB1-216ENST00000539739 DDX21Q9NR30 783 aaKnown RBP eCLIP19.78■□□□□ 0.76
DDB1-216ENST00000539739 CHPF2Q9P2E5 772 aa19.78■□□□□ 0.76
DDB1-216ENST00000539739 ZBTB1Q9Y2K1 713 aa19.78■□□□□ 0.76
DDB1-216ENST00000539739 NBPF14Q5TI25 921 aa19.77■□□□□ 0.76
DDB1-216ENST00000539739 TAF1LQ8IZX4 1826 aa19.77■□□□□ 0.76
DDB1-216ENST00000539739 TCERG1O14776 1098 aaKnown RBP19.76■□□□□ 0.75
DDB1-216ENST00000539739 GNPATO15228 680 aa19.76■□□□□ 0.75
DDB1-216ENST00000539739 MYL6BP14649 208 aa19.76■□□□□ 0.75
DDB1-216ENST00000539739 HYPKQ9NX55 129 aa19.76■□□□□ 0.75
DDB1-216ENST00000539739 STK32BQ9NY57 414 aa19.76■□□□□ 0.75
DDB1-216ENST00000539739 RTCBQ9Y3I0 505 aaKnown RBP19.76■□□□□ 0.75
DDB1-216ENST00000539739 COL5A3P25940 1745 aaPredicted RBP19.76■□□□□ 0.75
DDB1-216ENST00000539739 C4BP0C0L5 1744 aa19.76■□□□□ 0.75
DDB1-216ENST00000539739 RPS6KA4O75676 772 aa19.76■□□□□ 0.75
DDB1-216ENST00000539739 SLC4A2P04920 1241 aa19.76■□□□□ 0.75
DDB1-216ENST00000539739 IL6STP40189 918 aaPredicted RBP19.76■□□□□ 0.75
DDB1-216ENST00000539739 PIP4K2AP48426 406 aaPredicted RBP19.76■□□□□ 0.75
DDB1-216ENST00000539739 RARSP54136 660 aaKnown RBP19.76■□□□□ 0.75
DDB1-216ENST00000539739 PDIA6Q15084 440 aa19.76■□□□□ 0.75
DDB1-216ENST00000539739 ZNF330Q9Y3S2 320 aaPredicted RBP19.76■□□□□ 0.75
DDB1-216ENST00000539739 RREB1Q92766 1687 aa19.75■□□□□ 0.75
DDB1-216ENST00000539739 NBPF26B4DH59 902 aa19.75■□□□□ 0.75
DDB1-216ENST00000539739 NBPF10Q6P3W6 841 aaKnown RBP19.75■□□□□ 0.75
DDB1-216ENST00000539739 NBPF15Q8N660 670 aa19.75■□□□□ 0.75
DDB1-216ENST00000539739 SSH1Q8WYL5 1049 aa19.75■□□□□ 0.75
DDB1-216ENST00000539739 AKT1S1Q96B36 256 aa19.75■□□□□ 0.75
DDB1-216ENST00000539739 SMC4Q9NTJ3 1288 aa19.75■□□□□ 0.75
DDB1-216ENST00000539739 TFCP2L1Q9NZI6 479 aa19.75■□□□□ 0.75
DDB1-216ENST00000539739 ANXA1P04083 346 aa19.74■□□□□ 0.75
DDB1-216ENST00000539739 EIF5P55010 431 aaKnown RBP19.73■□□□□ 0.75
DDB1-216ENST00000539739 SLC15A2Q16348 729 aa19.73■□□□□ 0.75
DDB1-216ENST00000539739 PROSER3Q2NL68 480 aa19.73■□□□□ 0.75
DDB1-216ENST00000539739 RCAN3Q9UKA8 241 aa19.73■□□□□ 0.75
DDB1-216ENST00000539739 ZNF827Q17R98 1081 aa19.73■□□□□ 0.75
DDB1-216ENST00000539739 BCL2L13Q9BXK5 485 aa19.73■□□□□ 0.75
DDB1-216ENST00000539739 MYH14Q7Z406 1995 aaKnown RBP19.72■□□□□ 0.75
DDB1-216ENST00000539739 NUP188Q5SRE5 1749 aa19.72■□□□□ 0.75
DDB1-216ENST00000539739 A0A087WZG4 1122 aa19.72■□□□□ 0.75
DDB1-216ENST00000539739 SOCS7O14512 581 aa19.72■□□□□ 0.75
DDB1-216ENST00000539739 ADRA2BP18089 450 aa19.72■□□□□ 0.75
DDB1-216ENST00000539739 SSFA2P28290 1259 aa19.72■□□□□ 0.75
DDB1-216ENST00000539739 TRAPPC3LQ5T215 181 aa19.72■□□□□ 0.75
DDB1-216ENST00000539739 MRPL50Q8N5N7 158 aaKnown RBP19.72■□□□□ 0.75
DDB1-216ENST00000539739 FLAD1Q8NFF5 587 aa19.72■□□□□ 0.75
DDB1-216ENST00000539739 ARXQ96QS3 562 aa19.72■□□□□ 0.75
DDB1-216ENST00000539739 ANO8Q9HCE9 1232 aaPredicted RBP19.71■□□□□ 0.75
DDB1-216ENST00000539739 COL15A1P39059 1388 aa19.7■□□□□ 0.74
DDB1-216ENST00000539739 PHF14O94880 888 aa19.7■□□□□ 0.74
DDB1-216ENST00000539739 BRPF1P55201 1214 aaPredicted RBP19.7■□□□□ 0.74
DDB1-216ENST00000539739 AIMP1Q12904 312 aaKnown RBP19.7■□□□□ 0.74
DDB1-216ENST00000539739 XAGE3Q8WTP9 111 aa19.7■□□□□ 0.74
DDB1-216ENST00000539739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.69■□□□□ 0.74
DDB1-216ENST00000539739 COPS6Q7L5N1 327 aa19.69■□□□□ 0.74
DDB1-216ENST00000539739 LRP10Q7Z4F1 713 aa19.69■□□□□ 0.74
DDB1-216ENST00000539739 PHAXQ9H814 394 aaKnown RBP19.69■□□□□ 0.74
DDB1-216ENST00000539739 BCAR3O75815 825 aa19.69■□□□□ 0.74
DDB1-216ENST00000539739 DDX58O95786 925 aaKnown RBP19.69■□□□□ 0.74
DDB1-216ENST00000539739 FLIIQ13045 1269 aa19.69■□□□□ 0.74
DDB1-216ENST00000539739 KIF6Q6ZMV9 814 aa19.69■□□□□ 0.74
DDB1-216ENST00000539739 CACNA1FO60840 1977 aa19.68■□□□□ 0.74
DDB1-216ENST00000539739 KIF16BQ96L93 1317 aa19.68■□□□□ 0.74
DDB1-216ENST00000539739 RFC4P35249 363 aa19.68■□□□□ 0.74
DDB1-216ENST00000539739 DZIP3Q86Y13 1208 aaKnown RBP19.68■□□□□ 0.74
DDB1-216ENST00000539739 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
DDB1-216ENST00000539739 G2E3Q7L622 706 aa19.67■□□□□ 0.74
DDB1-216ENST00000539739 IPO8O15397 1037 aaKnown RBP19.66■□□□□ 0.74
DDB1-216ENST00000539739 MSH5O43196 834 aa19.66■□□□□ 0.74
DDB1-216ENST00000539739 ZPR1O75312 459 aa19.66■□□□□ 0.74
DDB1-216ENST00000539739 FKBP5Q13451 457 aaPredicted RBP19.66■□□□□ 0.74
DDB1-216ENST00000539739 SMIM5Q71RC9 77 aa19.66■□□□□ 0.74
DDB1-216ENST00000539739 AMIGO3Q86WK7 504 aa19.66■□□□□ 0.74
DDB1-216ENST00000539739 TBC1D2BQ9UPU7 963 aa19.66■□□□□ 0.74
DDB1-216ENST00000539739 PTPRCP08575 1304 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms