RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 GBP3Q9H0R5 595 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 BOLA2Q9H3K6 86 aa7.56□□□□□ -1.2
LSAMP-207ENST00000539563 PIP4K2BP78356 416 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 C8orf76Q96K31 380 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 ANKRD18BA2A2Z9 1011 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 MINDY4BA8MYZ0 360 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 PYM1Q9BRP8 204 aaKnown RBP7.55□□□□□ -1.2
LSAMP-207ENST00000539563 FANCAO15360 1455 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 DENND4BO75064 1496 aaPredicted RBP7.55□□□□□ -1.2
LSAMP-207ENST00000539563 FKBP15Q5T1M5 1219 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 CTCFLQ8NI51 663 aaPredicted RBP7.55□□□□□ -1.2
LSAMP-207ENST00000539563 SSH1Q8WYL5 1049 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 IL16Q14005 1332 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 CCDC83Q8IWF9 413 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 PDCL2Q8N4E4 241 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 CRACR2BQ8N4Y2 399 aaPredicted RBP7.55□□□□□ -1.2
LSAMP-207ENST00000539563 SEPT11Q9NVA2 429 aaKnown RBP7.55□□□□□ -1.2
LSAMP-207ENST00000539563 TMEM266Q2M3C6 531 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 CFAP100Q494V2 611 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 PPP4R3AQ6IN85 833 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 ASXL1Q8IXJ9 1541 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 DNAAF4Q8WXU2 420 aa7.55□□□□□ -1.2
LSAMP-207ENST00000539563 ZSCAN12O43309 604 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 FAM177A1Q8N128 213 aaPredicted RBP7.54□□□□□ -1.2
LSAMP-207ENST00000539563 MIS18AQ9NYP9 233 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 ANKIB1Q9P2G1 1089 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 CATIPQ7Z7H3 387 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 CUL5Q93034 780 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 CALRP27797 417 aaKnown RBP7.54□□□□□ -1.2
LSAMP-207ENST00000539563 XPCQ01831 940 aaPredicted RBP7.54□□□□□ -1.2
LSAMP-207ENST00000539563 SPA17Q15506 151 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 ENOX2Q16206 610 aaKnown RBP7.54□□□□□ -1.2
LSAMP-207ENST00000539563 RPGRQ92834 1020 aaKnown RBP7.54□□□□□ -1.2
LSAMP-207ENST00000539563 DDX11Q96FC9 970 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 SLC12A7Q9Y666 1083 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 PTCD1O75127 700 aaKnown RBP7.54□□□□□ -1.2
LSAMP-207ENST00000539563 KIF20AO95235 890 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 MAP9Q49MG5 647 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 BICDL1Q6ZP65 573 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 AMOTL2Q9Y2J4 779 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 LRRFIP2Q9Y608 721 aaKnown RBP7.54□□□□□ -1.2
LSAMP-207ENST00000539563 SPINK5Q9NQ38 1064 aaPredicted RBP7.54□□□□□ -1.2
LSAMP-207ENST00000539563 PHF8Q9UPP1 1060 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 EZRP15311 586 aaKnown RBP7.54□□□□□ -1.2
LSAMP-207ENST00000539563 LIMCH1Q9UPQ0 1083 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 RALGAPBQ86X10 1494 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 CASQ1P31415 396 aa7.54□□□□□ -1.2
LSAMP-207ENST00000539563 WDHD1O75717 1129 aaPredicted RBP7.53□□□□□ -1.2
LSAMP-207ENST00000539563 VPS36Q86VN1 386 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 CCDC150Q8NCX0 1101 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 CDC5LQ99459 802 aaKnown RBP7.53□□□□□ -1.2
LSAMP-207ENST00000539563 PIK3R4Q99570 1358 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 ANKRD36BQ8N2N9 1353 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 ANKRD62A6NC57 917 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 ARHGAP29Q52LW3 1261 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 BAG4O95429 457 aaKnown RBP7.53□□□□□ -1.2
LSAMP-207ENST00000539563 CCDC12Q8WUD4 166 aaPredicted RBP7.53□□□□□ -1.2
LSAMP-207ENST00000539563 CWC25Q9NXE8 425 aaPredicted RBP7.53□□□□□ -1.2
LSAMP-207ENST00000539563 UQCRHLA0A096LP55 91 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 UQCRHP07919 91 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 CCDC184Q52MB2 194 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 KANK3Q6NY19 840 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 KDM5BQ9UGL1 1544 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 SMARCA5O60264 1052 aaPredicted RBP7.53□□□□□ -1.2
LSAMP-207ENST00000539563 AMPD3Q01432 767 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 PRPF40BQ6NWY9 871 aaKnown RBP7.53□□□□□ -1.2
LSAMP-207ENST00000539563 FILIP1Q7Z7B0 1213 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 TRMT112Q9UI30 125 aaKnown RBP7.53□□□□□ -1.2
LSAMP-207ENST00000539563 CFAP43Q8NDM7 1665 aa7.53□□□□□ -1.2
LSAMP-207ENST00000539563 IFIT3O14879 490 aaKnown RBP7.52□□□□□ -1.2
LSAMP-207ENST00000539563 KIF5CO60282 957 aa7.52□□□□□ -1.2
LSAMP-207ENST00000539563 NEBLO76041 1014 aa7.52□□□□□ -1.2
LSAMP-207ENST00000539563 SPTY2D1Q68D10 685 aaPredicted RBP7.52□□□□□ -1.2
LSAMP-207ENST00000539563 CACNA2D4Q7Z3S7 1137 aa7.52□□□□□ -1.2
LSAMP-207ENST00000539563 PIBF1Q8WXW3 757 aa7.52□□□□□ -1.2
LSAMP-207ENST00000539563 NOS1P29475 1434 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 KRT28Q7Z3Y7 464 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 HMG20BQ9P0W2 317 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 EXOC5O00471 708 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 KIF5BP33176 963 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 NLRP5P59047 1200 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 MPRIPQ6WCQ1 1025 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 NME9Q86XW9 330 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 CCDC85AQ96PX6 553 aaPredicted RBP7.52□□□□□ -1.21
LSAMP-207ENST00000539563 PTPN14Q15678 1187 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 LDHCP07864 332 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 PPP1R42Q7Z4L9 355 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 CCDC91Q7Z6B0 441 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 MAP3K2Q9Y2U5 619 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 SYCE3A1L190 88 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 IFNL2Q8IZJ0 200 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 DMRT2Q9Y5R5 561 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 NEMFO60524 1076 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 BAG3O95817 575 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 CNNM3Q8NE01 707 aa7.52□□□□□ -1.21
LSAMP-207ENST00000539563 RANBP6O60518 1105 aaKnown RBP7.51□□□□□ -1.21
LSAMP-207ENST00000539563 USO1O60763 962 aaKnown RBP7.51□□□□□ -1.21
LSAMP-207ENST00000539563 TOP1P11387 765 aaKnown RBP7.51□□□□□ -1.21
LSAMP-207ENST00000539563 SFPQP23246 707 aaKnown RBP eCLIP7.51□□□□□ -1.21
LSAMP-207ENST00000539563 KIF18AQ8NI77 898 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms