RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 RHBDD1Q8TEB9 315 aa5.3□□□□□ -1.56
CBX3P4-201ENST00000538909 CDCA7Q9BWT1 371 aaPredicted RBP5.3□□□□□ -1.56
CBX3P4-201ENST00000538909 HCN2Q9UL51 889 aa5.3□□□□□ -1.56
CBX3P4-201ENST00000538909 KHNYNO15037 678 aaKnown RBP5.29□□□□□ -1.56
CBX3P4-201ENST00000538909 MAPTP10636 758 aaKnown RBP5.29□□□□□ -1.56
CBX3P4-201ENST00000538909 RFC5P40937 340 aa5.29□□□□□ -1.56
CBX3P4-201ENST00000538909 LRP8Q14114 963 aa5.29□□□□□ -1.56
CBX3P4-201ENST00000538909 PRR12Q9ULL5 1215 aa5.29□□□□□ -1.56
CBX3P4-201ENST00000538909 SPDYE3A6NKU9 549 aa5.28□□□□□ -1.56
CBX3P4-201ENST00000538909 TLR1Q15399 786 aa5.28□□□□□ -1.56
CBX3P4-201ENST00000538909 LCE1DQ5T752 114 aa5.28□□□□□ -1.56
CBX3P4-201ENST00000538909 AIDAQ96BJ3 306 aa5.28□□□□□ -1.56
CBX3P4-201ENST00000538909 HYAL3O43820 417 aaPredicted RBP5.27□□□□□ -1.57
CBX3P4-201ENST00000538909 ATP4AP20648 1035 aa5.27□□□□□ -1.57
CBX3P4-201ENST00000538909 TNP2Q05952 138 aa5.27□□□□□ -1.57
CBX3P4-201ENST00000538909 NR1H3Q13133 447 aa5.27□□□□□ -1.57
CBX3P4-201ENST00000538909 ESCO1Q5FWF5 840 aa5.27□□□□□ -1.57
CBX3P4-201ENST00000538909 ARSJQ5FYB0 599 aaPredicted RBP5.27□□□□□ -1.57
CBX3P4-201ENST00000538909 PPARGC1BQ86YN6 1023 aaKnown RBP5.27□□□□□ -1.57
CBX3P4-201ENST00000538909 CCDC85AQ96PX6 553 aaPredicted RBP5.27□□□□□ -1.57
CBX3P4-201ENST00000538909 FAM117AQ9C073 453 aa5.27□□□□□ -1.57
CBX3P4-201ENST00000538909 A0A1W2PNR3 127 aa5.26□□□□□ -1.57
CBX3P4-201ENST00000538909 GRIK4Q16099 956 aa5.26□□□□□ -1.57
CBX3P4-201ENST00000538909 FAM182BQ5T319 152 aa5.26□□□□□ -1.57
CBX3P4-201ENST00000538909 ZNF468Q5VIY5 522 aaPredicted RBP5.26□□□□□ -1.57
CBX3P4-201ENST00000538909 NLRP8Q86W28 1048 aa5.26□□□□□ -1.57
CBX3P4-201ENST00000538909 ETNK1Q9HBU6 452 aa5.26□□□□□ -1.57
CBX3P4-201ENST00000538909 AVENQ9NQS1 362 aaPredicted RBP5.26□□□□□ -1.57
CBX3P4-201ENST00000538909 ALAS2P22557 587 aa5.25□□□□□ -1.57
CBX3P4-201ENST00000538909 MCCD1P59942 119 aaPredicted RBP5.25□□□□□ -1.57
CBX3P4-201ENST00000538909 TRIM28Q13263 835 aaKnown RBP5.25□□□□□ -1.57
CBX3P4-201ENST00000538909 GPBP1L1Q9HC44 474 aaPredicted RBP5.25□□□□□ -1.57
CBX3P4-201ENST00000538909 ELOA3CA0A087WX78 387 aaPredicted RBP5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 ELOA3DA6NLF2 546 aaPredicted RBP5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 M0R082 166 aa5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 ELOA3BQ3SY89 546 aa5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 C8orf86Q6ZUL3 223 aa5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 ELOA3Q8NG57 546 aa5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 ZNF417Q8TAU3 575 aa5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 GJD4Q96KN9 370 aaPredicted RBP5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 NACC1Q96RE7 527 aa5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 ZNF587Q96SQ5 575 aaPredicted RBP5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 STRN4Q9NRL3 753 aa5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 ZNF330Q9Y3S2 320 aaPredicted RBP5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 GJA3Q9Y6H8 435 aa5.24□□□□□ -1.57
CBX3P4-201ENST00000538909 SYT9Q86SS6 491 aa5.23□□□□□ -1.57
CBX3P4-201ENST00000538909 C1orf216Q8TAB5 229 aa5.23□□□□□ -1.57
CBX3P4-201ENST00000538909 ZNF592Q92610 1267 aa5.23□□□□□ -1.57
CBX3P4-201ENST00000538909 DDRGK1Q96HY6 314 aa5.23□□□□□ -1.57
CBX3P4-201ENST00000538909 KDM4CQ9H3R0 1056 aa5.23□□□□□ -1.57
CBX3P4-201ENST00000538909 COBLO75128 1261 aa5.22□□□□□ -1.57
CBX3P4-201ENST00000538909 H2AFB1P0C5Y9 115 aa5.22□□□□□ -1.57
CBX3P4-201ENST00000538909 H2AFB2P0C5Z0 115 aa5.22□□□□□ -1.57
CBX3P4-201ENST00000538909 MCTP1Q6DN14 999 aa5.22□□□□□ -1.57
CBX3P4-201ENST00000538909 NIFKQ9BYG3 293 aaKnown RBP5.22□□□□□ -1.57
CBX3P4-201ENST00000538909 MARK1Q9P0L2 795 aa5.22□□□□□ -1.57
CBX3P4-201ENST00000538909 ALBP02768 609 aa5.21□□□□□ -1.58
CBX3P4-201ENST00000538909 FAM157BP0CG42 384 aa5.21□□□□□ -1.58
CBX3P4-201ENST00000538909 COL9A3Q14050 684 aaPredicted RBP5.21□□□□□ -1.58
CBX3P4-201ENST00000538909 NBPF1Q3BBV0 1214 aa5.21□□□□□ -1.58
CBX3P4-201ENST00000538909 TSGA10IPQ3SY00 556 aa5.21□□□□□ -1.58
CBX3P4-201ENST00000538909 TMEM259Q4ZIN3 620 aa5.21□□□□□ -1.58
CBX3P4-201ENST00000538909 CEP126Q9P2H0 1117 aa5.21□□□□□ -1.58
CBX3P4-201ENST00000538909 TATP17735 454 aaPredicted RBP5.2□□□□□ -1.58
CBX3P4-201ENST00000538909 MBTPS1Q14703 1052 aa5.2□□□□□ -1.58
CBX3P4-201ENST00000538909 OXLD1Q5BKU9 147 aa5.2□□□□□ -1.58
CBX3P4-201ENST00000538909 TP53INP1Q96A56 240 aa5.2□□□□□ -1.58
CBX3P4-201ENST00000538909 ZIC5Q96T25 663 aa5.2□□□□□ -1.58
CBX3P4-201ENST00000538909 DOLKQ9UPQ8 538 aa5.2□□□□□ -1.58
CBX3P4-201ENST00000538909 GDF10P55107 478 aa5.19□□□□□ -1.58
CBX3P4-201ENST00000538909 TRAPPC3LQ5T215 181 aa5.19□□□□□ -1.58
CBX3P4-201ENST00000538909 BICDL1Q6ZP65 573 aa5.19□□□□□ -1.58
CBX3P4-201ENST00000538909 MICALL1Q8N3F8 863 aa5.19□□□□□ -1.58
CBX3P4-201ENST00000538909 SERTAD1Q9UHV2 236 aa5.19□□□□□ -1.58
CBX3P4-201ENST00000538909 STARD13Q9Y3M8 1113 aa5.19□□□□□ -1.58
CBX3P4-201ENST00000538909 C9orf172C9J069 976 aa5.18□□□□□ -1.58
CBX3P4-201ENST00000538909 NID1P14543 1247 aa5.18□□□□□ -1.58
CBX3P4-201ENST00000538909 SELPP16109 830 aa5.18□□□□□ -1.58
CBX3P4-201ENST00000538909 SCNN1DP51172 638 aa5.18□□□□□ -1.58
CBX3P4-201ENST00000538909 USP4Q13107 963 aa5.18□□□□□ -1.58
CBX3P4-201ENST00000538909 ADGRE1Q14246 886 aa5.18□□□□□ -1.58
CBX3P4-201ENST00000538909 TXNRD3Q86VQ6 643 aa5.18□□□□□ -1.58
CBX3P4-201ENST00000538909 MDFIQ99750 246 aa5.18□□□□□ -1.58
CBX3P4-201ENST00000538909 KRTAP4-9Q9BYQ8 210 aa5.18□□□□□ -1.58
CBX3P4-201ENST00000538909 PARP3Q9Y6F1 533 aa5.18□□□□□ -1.58
CBX3P4-201ENST00000538909 ADARB2-AS1A8MUL3 147 aa5.17□□□□□ -1.58
CBX3P4-201ENST00000538909 EFSO43281 561 aa5.17□□□□□ -1.58
CBX3P4-201ENST00000538909 PAX4O43316 350 aa5.17□□□□□ -1.58
CBX3P4-201ENST00000538909 SIN3BO75182 1162 aa5.17□□□□□ -1.58
CBX3P4-201ENST00000538909 INHAP05111 366 aa5.17□□□□□ -1.58
CBX3P4-201ENST00000538909 SMTNP53814 917 aa5.17□□□□□ -1.58
CBX3P4-201ENST00000538909 SHISA2Q6UWI4 295 aa5.17□□□□□ -1.58
CBX3P4-201ENST00000538909 CABP1Q9NZU7 370 aa5.17□□□□□ -1.58
CBX3P4-201ENST00000538909 USP3Q9Y6I4 520 aa5.17□□□□□ -1.58
CBX3P4-201ENST00000538909 GPR37L1O60883 481 aa5.16□□□□□ -1.58
CBX3P4-201ENST00000538909 ELNP15502 786 aa5.16□□□□□ -1.58
CBX3P4-201ENST00000538909 ADH7P40394 386 aa5.16□□□□□ -1.58
CBX3P4-201ENST00000538909 LAMC2Q13753 1193 aa5.16□□□□□ -1.58
CBX3P4-201ENST00000538909 SAMD5Q5TGI4 173 aa5.16□□□□□ -1.58
CBX3P4-201ENST00000538909 RAB44Q7Z6P3 723 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms