RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 ZNF831Q5JPB2 1677 aa16.46■□□□□ 0.23
CDK2AP1-204ENST00000538446 GNPATO15228 680 aa16.45■□□□□ 0.22
CDK2AP1-204ENST00000538446 EIF2S2P20042 333 aaKnown RBP16.45■□□□□ 0.22
CDK2AP1-204ENST00000538446 TWISTNBQ3B726 338 aaPredicted RBP16.45■□□□□ 0.22
CDK2AP1-204ENST00000538446 TRMT2AQ8IZ69 625 aaKnown RBP16.45■□□□□ 0.22
CDK2AP1-204ENST00000538446 RREB1Q92766 1687 aa16.45■□□□□ 0.22
CDK2AP1-204ENST00000538446 CICQ96RK0 1608 aaPredicted RBP16.45■□□□□ 0.22
CDK2AP1-204ENST00000538446 SLC15A2Q16348 729 aa16.44■□□□□ 0.22
CDK2AP1-204ENST00000538446 ZNF827Q17R98 1081 aa16.44■□□□□ 0.22
CDK2AP1-204ENST00000538446 HDGFL1Q5TGJ6 251 aa16.44■□□□□ 0.22
CDK2AP1-204ENST00000538446 TSPYL6Q8N831 410 aa16.44■□□□□ 0.22
CDK2AP1-204ENST00000538446 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
CDK2AP1-204ENST00000538446 ANO8Q9HCE9 1232 aaPredicted RBP16.44■□□□□ 0.22
CDK2AP1-204ENST00000538446 TFCP2L1Q9NZI6 479 aa16.44■□□□□ 0.22
CDK2AP1-204ENST00000538446 TJP1Q07157 1748 aa16.43■□□□□ 0.22
CDK2AP1-204ENST00000538446 INTS5Q6P9B9 1019 aaKnown RBP16.43■□□□□ 0.22
CDK2AP1-204ENST00000538446 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
CDK2AP1-204ENST00000538446 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
CDK2AP1-204ENST00000538446 C5P01031 1676 aa16.43■□□□□ 0.22
CDK2AP1-204ENST00000538446 RPS6KA4O75676 772 aa16.42■□□□□ 0.22
CDK2AP1-204ENST00000538446 A1BGP04217 495 aa16.42■□□□□ 0.22
CDK2AP1-204ENST00000538446 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
CDK2AP1-204ENST00000538446 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
CDK2AP1-204ENST00000538446 ZBTB1Q9Y2K1 713 aa16.42■□□□□ 0.22
CDK2AP1-204ENST00000538446 ERBB4Q15303 1308 aa16.42■□□□□ 0.22
CDK2AP1-204ENST00000538446 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
CDK2AP1-204ENST00000538446 CCDC30Q5VVM6 783 aa16.41■□□□□ 0.22
CDK2AP1-204ENST00000538446 NUP188Q5SRE5 1749 aa16.41■□□□□ 0.22
CDK2AP1-204ENST00000538446 VAMP4O75379 141 aa16.4■□□□□ 0.22
CDK2AP1-204ENST00000538446 PHF14O94880 888 aa16.4■□□□□ 0.22
CDK2AP1-204ENST00000538446 CT47B1P0C2W7 299 aaPredicted RBP16.4■□□□□ 0.22
CDK2AP1-204ENST00000538446 SSFA2P28290 1259 aa16.4■□□□□ 0.22
CDK2AP1-204ENST00000538446 FLAD1Q8NFF5 587 aa16.4■□□□□ 0.22
CDK2AP1-204ENST00000538446 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
CDK2AP1-204ENST00000538446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.39■□□□□ 0.21
CDK2AP1-204ENST00000538446 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
CDK2AP1-204ENST00000538446 ADRA2BP18089 450 aa16.39■□□□□ 0.21
CDK2AP1-204ENST00000538446 IL6STP40189 918 aaPredicted RBP16.39■□□□□ 0.21
CDK2AP1-204ENST00000538446 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
CDK2AP1-204ENST00000538446 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
CDK2AP1-204ENST00000538446 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
CDK2AP1-204ENST00000538446 STK31Q9BXU1 1019 aa16.39■□□□□ 0.21
CDK2AP1-204ENST00000538446 DBF4Q9UBU7 674 aaPredicted RBP16.39■□□□□ 0.21
CDK2AP1-204ENST00000538446 MYL6BP14649 208 aa16.38■□□□□ 0.21
CDK2AP1-204ENST00000538446 R3HDM1Q15032 1099 aaKnown RBP16.38■□□□□ 0.21
CDK2AP1-204ENST00000538446 TRAPPC3LQ5T215 181 aa16.38■□□□□ 0.21
CDK2AP1-204ENST00000538446 ZNF428Q96B54 188 aa16.38■□□□□ 0.21
CDK2AP1-204ENST00000538446 DDX21Q9NR30 783 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDK2AP1-204ENST00000538446 CHPF2Q9P2E5 772 aa16.38■□□□□ 0.21
CDK2AP1-204ENST00000538446 COL5A3P25940 1745 aaPredicted RBP16.38■□□□□ 0.21
CDK2AP1-204ENST00000538446 COL15A1P39059 1388 aa16.38■□□□□ 0.21
CDK2AP1-204ENST00000538446 A0A087WZG4 1122 aa16.37■□□□□ 0.21
CDK2AP1-204ENST00000538446 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
CDK2AP1-204ENST00000538446 AMIGO3Q86WK7 504 aa16.37■□□□□ 0.21
CDK2AP1-204ENST00000538446 PNPLA7Q6ZV29 1317 aa16.37■□□□□ 0.21
CDK2AP1-204ENST00000538446 LAMB4A4D0S4 1761 aa16.36■□□□□ 0.21
CDK2AP1-204ENST00000538446 MSH5O43196 834 aa16.36■□□□□ 0.21
CDK2AP1-204ENST00000538446 RFC4P35249 363 aa16.36■□□□□ 0.21
CDK2AP1-204ENST00000538446 PDIA6Q15084 440 aa16.36■□□□□ 0.21
CDK2AP1-204ENST00000538446 PROSER3Q2NL68 480 aa16.36■□□□□ 0.21
CDK2AP1-204ENST00000538446 HYPKQ9NX55 129 aa16.36■□□□□ 0.21
CDK2AP1-204ENST00000538446 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
CDK2AP1-204ENST00000538446 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
CDK2AP1-204ENST00000538446 ANXA1P04083 346 aa16.35■□□□□ 0.21
CDK2AP1-204ENST00000538446 SMIM5Q71RC9 77 aa16.35■□□□□ 0.21
CDK2AP1-204ENST00000538446 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
CDK2AP1-204ENST00000538446 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
CDK2AP1-204ENST00000538446 ARXQ96QS3 562 aa16.35■□□□□ 0.21
CDK2AP1-204ENST00000538446 PSDA5PKW4 1024 aaPredicted RBP16.34■□□□□ 0.21
CDK2AP1-204ENST00000538446 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
CDK2AP1-204ENST00000538446 ZPR1O75312 459 aa16.33■□□□□ 0.2
CDK2AP1-204ENST00000538446 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
CDK2AP1-204ENST00000538446 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
CDK2AP1-204ENST00000538446 LRP10Q7Z4F1 713 aa16.33■□□□□ 0.2
CDK2AP1-204ENST00000538446 AIMP1Q12904 312 aaKnown RBP16.32■□□□□ 0.2
CDK2AP1-204ENST00000538446 ALDH1L2Q3SY69 923 aa16.32■□□□□ 0.2
CDK2AP1-204ENST00000538446 COPS6Q7L5N1 327 aa16.32■□□□□ 0.2
CDK2AP1-204ENST00000538446 XAGE3Q8WTP9 111 aa16.32■□□□□ 0.2
CDK2AP1-204ENST00000538446 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
CDK2AP1-204ENST00000538446 TBC1D2BQ9UPU7 963 aa16.32■□□□□ 0.2
CDK2AP1-204ENST00000538446 SLC16A10Q8TF71 515 aa16.31■□□□□ 0.2
CDK2AP1-204ENST00000538446 SSH1Q8WYL5 1049 aa16.31■□□□□ 0.2
CDK2AP1-204ENST00000538446 SMC4Q9NTJ3 1288 aa16.31■□□□□ 0.2
CDK2AP1-204ENST00000538446 NARFQ9UHQ1 456 aa16.31■□□□□ 0.2
CDK2AP1-204ENST00000538446 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
CDK2AP1-204ENST00000538446 TTLL7Q6ZT98 887 aa16.3■□□□□ 0.2
CDK2AP1-204ENST00000538446 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
CDK2AP1-204ENST00000538446 PHAXQ9H814 394 aaKnown RBP16.3■□□□□ 0.2
CDK2AP1-204ENST00000538446 SRP68Q9UHB9 627 aaKnown RBP16.3■□□□□ 0.2
CDK2AP1-204ENST00000538446 MYH14Q7Z406 1995 aaKnown RBP16.29■□□□□ 0.2
CDK2AP1-204ENST00000538446 CAMTA2O94983 1202 aa16.29■□□□□ 0.2
CDK2AP1-204ENST00000538446 DDX58O95786 925 aaKnown RBP16.29■□□□□ 0.2
CDK2AP1-204ENST00000538446 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
CDK2AP1-204ENST00000538446 PDGFDQ9GZP0 370 aaPredicted RBP16.29■□□□□ 0.2
CDK2AP1-204ENST00000538446 ZNF652Q9Y2D9 606 aa16.29■□□□□ 0.2
CDK2AP1-204ENST00000538446 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
CDK2AP1-204ENST00000538446 MAP3K15Q6ZN16 1313 aa16.28■□□□□ 0.2
CDK2AP1-204ENST00000538446 ERVV-1B6SEH8 477 aa16.28■□□□□ 0.2
CDK2AP1-204ENST00000538446 RGL2O15211 777 aa16.28■□□□□ 0.2
CDK2AP1-204ENST00000538446 FLIIQ13045 1269 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms