RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 ZNF697Q5TEC3 545 aa7.72□□□□□ -1.17
NPIPB3-208ENST00000537983 ZNF598Q86UK7 904 aaKnown RBP7.72□□□□□ -1.17
NPIPB3-208ENST00000537983 NFATC2IPQ8NCF5 419 aa7.72□□□□□ -1.17
NPIPB3-208ENST00000537983 PPP1R12CQ9BZL4 782 aa7.72□□□□□ -1.17
NPIPB3-208ENST00000537983 MAP4K5Q9Y4K4 846 aa7.72□□□□□ -1.17
NPIPB3-208ENST00000537983 ARHGEF40Q8TER5 1519 aa7.72□□□□□ -1.17
NPIPB3-208ENST00000537983 SPATA31E1Q6ZUB1 1445 aa7.71□□□□□ -1.17
NPIPB3-208ENST00000537983 PRAG1Q86YV5 1406 aa7.71□□□□□ -1.17
NPIPB3-208ENST00000537983 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
NPIPB3-208ENST00000537983 KIF3BO15066 747 aa7.71□□□□□ -1.18
NPIPB3-208ENST00000537983 TBC1D9Q6ZT07 1266 aa7.71□□□□□ -1.18
NPIPB3-208ENST00000537983 MPNDQ8N594 471 aa7.71□□□□□ -1.18
NPIPB3-208ENST00000537983 CDK15Q96Q40 435 aa7.71□□□□□ -1.18
NPIPB3-208ENST00000537983 PKD2L1Q9P0L9 805 aa7.71□□□□□ -1.18
NPIPB3-208ENST00000537983 CDV3Q9UKY7 258 aaKnown RBP7.71□□□□□ -1.18
NPIPB3-208ENST00000537983 AGLP35573 1532 aa7.71□□□□□ -1.18
NPIPB3-208ENST00000537983 GIGYF1O75420 1035 aaPredicted RBP7.7□□□□□ -1.18
NPIPB3-208ENST00000537983 NBPF20Q3BBV1 942 aa7.7□□□□□ -1.18
NPIPB3-208ENST00000537983 NBPF8Q3BBV2 869 aa7.7□□□□□ -1.18
NPIPB3-208ENST00000537983 MRGPRX2Q96LB1 330 aa7.7□□□□□ -1.18
NPIPB3-208ENST00000537983 TLL2Q9Y6L7 1015 aa7.7□□□□□ -1.18
NPIPB3-208ENST00000537983 CNTLNQ9NXG0 1405 aa7.69□□□□□ -1.18
NPIPB3-208ENST00000537983 YEATS2Q9ULM3 1422 aa7.69□□□□□ -1.18
NPIPB3-208ENST00000537983 ADGRB3O60242 1522 aa7.69□□□□□ -1.18
NPIPB3-208ENST00000537983 ATP9BO43861 1147 aa7.69□□□□□ -1.18
NPIPB3-208ENST00000537983 TFIP11Q9UBB9 837 aaKnown RBP7.69□□□□□ -1.18
NPIPB3-208ENST00000537983 MAFBQ9Y5Q3 323 aaPredicted RBP7.69□□□□□ -1.18
NPIPB3-208ENST00000537983 MADDQ8WXG6 1647 aa7.69□□□□□ -1.18
NPIPB3-208ENST00000537983 ARHGAP31Q2M1Z3 1444 aa7.69□□□□□ -1.18
NPIPB3-208ENST00000537983 KIF1BO60333 1816 aa7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 RAPGEF3O95398 923 aa7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 HSPA5P11021 654 aaKnown RBP7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 SLFNL1Q499Z3 407 aa7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 INTS6LQ5JSJ4 861 aaKnown RBP7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 RNF135Q8IUD6 432 aa7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 CCDC85AQ96PX6 553 aaPredicted RBP7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 KCTD15Q96SI1 283 aaPredicted RBP7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 IFT172Q9UG01 1749 aa7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 GPRASP1Q5JY77 1395 aa7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 USP47Q96K76 1375 aa7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 NPATQ14207 1427 aa7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 MYOM2P54296 1465 aa7.68□□□□□ -1.18
NPIPB3-208ENST00000537983 PIK3C2BO00750 1634 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 KIAA1210Q9ULL0 1709 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 USP17L5A8MUK1 530 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 GDF9O60383 454 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 SKIP12755 728 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 GRM5P41594 1212 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 SRPK2P78362 688 aaKnown RBP7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 TRAF7Q6Q0C0 670 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 TRIM67Q6ZTA4 783 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 VASH1Q7L8A9 365 aaPredicted RBP7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 PLEKHM2Q8IWE5 1019 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 SEPT12Q8IYM1 358 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 MROH2AA6NES4 1674 aa7.67□□□□□ -1.18
NPIPB3-208ENST00000537983 RGS20O76081 388 aa7.66□□□□□ -1.18
NPIPB3-208ENST00000537983 FOXC1Q12948 553 aa7.66□□□□□ -1.18
NPIPB3-208ENST00000537983 TSGA10IPQ3SY00 556 aa7.66□□□□□ -1.18
NPIPB3-208ENST00000537983 PLPP7Q8NBV4 271 aa7.66□□□□□ -1.18
NPIPB3-208ENST00000537983 NOS1P29475 1434 aa7.66□□□□□ -1.18
NPIPB3-208ENST00000537983 USP17L3A6NCW0 530 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 USP17L4A6NCW7 530 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 SYNMO15061 1565 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 ROCK2O75116 1388 aaKnown RBP7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 ADH1CP00326 375 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 FSHRP23945 695 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 LMOD1P29536 600 aaPredicted RBP7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 ARID5BQ14865 1188 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 MAP7D1Q3KQU3 841 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 RNF20Q5VTR2 975 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 USP17L2Q6R6M4 530 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 USP17L1Q7RTZ2 530 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 DCAF11Q8TEB1 546 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 SIGLEC1Q9BZZ2 1709 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 UGGT1Q9NYU2 1555 aa7.65□□□□□ -1.18
NPIPB3-208ENST00000537983 IQGAP1P46940 1657 aa7.64□□□□□ -1.19
NPIPB3-208ENST00000537983 PREX1Q8TCU6 1659 aa7.64□□□□□ -1.19
NPIPB3-208ENST00000537983 CCDC7Q96M83 1385 aa7.64□□□□□ -1.19
NPIPB3-208ENST00000537983 ARID4BQ4LE39 1312 aaPredicted RBP7.64□□□□□ -1.19
NPIPB3-208ENST00000537983 CCDC125Q86Z20 511 aa7.64□□□□□ -1.19
NPIPB3-208ENST00000537983 PBXIP1Q96AQ6 731 aa7.64□□□□□ -1.19
NPIPB3-208ENST00000537983 PPLO60437 1756 aa7.64□□□□□ -1.19
NPIPB3-208ENST00000537983 NRXN1Q9ULB1 1477 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 WASHC2AQ641Q2 1341 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 WASHC2CQ9Y4E1 1318 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 RFX1P22670 979 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 PRR20EP86478 221 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 PRR20CP86479 221 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 PRR20DP86480 221 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 PRR20BP86481 221 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 PRR20AP86496 221 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 NR5A1Q13285 461 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 NCOA4Q13772 614 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 ZNF326Q5BKZ1 582 aaKnown RBP7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 DEPDC4Q8N2C3 294 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 CARD11Q9BXL7 1154 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 DOLKQ9UPQ8 538 aa7.63□□□□□ -1.19
NPIPB3-208ENST00000537983 COL17A1Q9UMD9 1497 aaPredicted RBP7.62□□□□□ -1.19
NPIPB3-208ENST00000537983 ERVH48-1M5A8F1 160 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms