RNA–Protein interactions for RNA: ENST00000537856.7

TCF4-206, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-206ENST00000537856 SNRPA1P09661 255 aaKnown RBP13.93□□□□□ -0.18
TCF4-206ENST00000537856 RUNDC1Q96C34 613 aa13.93□□□□□ -0.18
TCF4-206ENST00000537856 UBR3Q6ZT12 1888 aa13.93□□□□□ -0.18
TCF4-206ENST00000537856 TUBGCP6Q96RT7 1819 aa13.93□□□□□ -0.18
TCF4-206ENST00000537856 GRIN3BO60391 1043 aa13.92□□□□□ -0.18
TCF4-206ENST00000537856 MCM10Q7L590 875 aa13.92□□□□□ -0.18
TCF4-206ENST00000537856 COL24A1Q17RW2 1714 aa13.92□□□□□ -0.18
TCF4-206ENST00000537856 GPR162Q16538 588 aa13.92□□□□□ -0.18
TCF4-206ENST00000537856 INTS5Q6P9B9 1019 aaKnown RBP13.92□□□□□ -0.18
TCF4-206ENST00000537856 ZNF496Q96IT1 587 aaPredicted RBP13.92□□□□□ -0.18
TCF4-206ENST00000537856 RIPK4P57078 832 aa13.91□□□□□ -0.18
TCF4-206ENST00000537856 CALD1Q05682 793 aaKnown RBP13.91□□□□□ -0.18
TCF4-206ENST00000537856 COL5A3P25940 1745 aaPredicted RBP13.91□□□□□ -0.18
TCF4-206ENST00000537856 MMP10P09238 476 aa13.91□□□□□ -0.18
TCF4-206ENST00000537856 IL6STP40189 918 aaPredicted RBP13.91□□□□□ -0.18
TCF4-206ENST00000537856 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.18
TCF4-206ENST00000537856 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.18
TCF4-206ENST00000537856 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
TCF4-206ENST00000537856 NARFQ9UHQ1 456 aa13.9□□□□□ -0.18
TCF4-206ENST00000537856 GYS1P13807 737 aa13.89□□□□□ -0.19
TCF4-206ENST00000537856 TGFB2P61812 414 aa13.89□□□□□ -0.19
TCF4-206ENST00000537856 PIAS4Q8N2W9 510 aaPredicted RBP13.89□□□□□ -0.19
TCF4-206ENST00000537856 VIRMAQ69YN4 1812 aaKnown RBP13.89□□□□□ -0.19
TCF4-206ENST00000537856 CANXP27824 592 aaKnown RBP13.89□□□□□ -0.19
TCF4-206ENST00000537856 CHMP4AQ9BY43 222 aa13.89□□□□□ -0.19
TCF4-206ENST00000537856 COL15A1P39059 1388 aa13.88□□□□□ -0.19
TCF4-206ENST00000537856 RGL2O15211 777 aa13.88□□□□□ -0.19
TCF4-206ENST00000537856 TMPOP42166 694 aaKnown RBP13.88□□□□□ -0.19
TCF4-206ENST00000537856 ZNF652Q9Y2D9 606 aa13.88□□□□□ -0.19
TCF4-206ENST00000537856 TJP1Q07157 1748 aa13.88□□□□□ -0.19
TCF4-206ENST00000537856 ZBTB1Q9Y2K1 713 aa13.87□□□□□ -0.19
TCF4-206ENST00000537856 UBR2Q8IWV8 1755 aa13.87□□□□□ -0.19
TCF4-206ENST00000537856 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
TCF4-206ENST00000537856 DCTN1Q14203 1278 aa13.87□□□□□ -0.19
TCF4-206ENST00000537856 PDZRN3Q9UPQ7 1066 aa13.87□□□□□ -0.19
TCF4-206ENST00000537856 AMIGO3Q86WK7 504 aa13.86□□□□□ -0.19
TCF4-206ENST00000537856 UBE2Q2Q8WVN8 375 aa13.86□□□□□ -0.19
TCF4-206ENST00000537856 TSPYL4Q9UJ04 414 aa13.86□□□□□ -0.19
TCF4-206ENST00000537856 ADAMTS8Q9UP79 889 aa13.86□□□□□ -0.19
TCF4-206ENST00000537856 SIPA1L3O60292 1781 aaPredicted RBP13.86□□□□□ -0.19
TCF4-206ENST00000537856 YY1P25490 414 aa13.85□□□□□ -0.19
TCF4-206ENST00000537856 USPL1Q5W0Q7 1092 aa13.85□□□□□ -0.19
TCF4-206ENST00000537856 ZNF330Q9Y3S2 320 aaPredicted RBP13.85□□□□□ -0.19
TCF4-206ENST00000537856 ERBB4Q15303 1308 aa13.85□□□□□ -0.19
TCF4-206ENST00000537856 CLEC4GQ6UXB4 293 aa13.83□□□□□ -0.19
TCF4-206ENST00000537856 SMIM5Q71RC9 77 aa13.83□□□□□ -0.19
TCF4-206ENST00000537856 SRP68Q9UHB9 627 aaKnown RBP13.83□□□□□ -0.19
TCF4-206ENST00000537856 NPHP1O15259 732 aa13.83□□□□□ -0.2
TCF4-206ENST00000537856 TM4SF1P30408 202 aa13.83□□□□□ -0.2
TCF4-206ENST00000537856 FKBP8Q14318 412 aa13.83□□□□□ -0.2
TCF4-206ENST00000537856 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
TCF4-206ENST00000537856 DZIP3Q86Y13 1208 aaKnown RBP13.83□□□□□ -0.2
TCF4-206ENST00000537856 KCNQ3O43525 872 aa13.82□□□□□ -0.2
TCF4-206ENST00000537856 DEKP35659 375 aaKnown RBP13.82□□□□□ -0.2
TCF4-206ENST00000537856 EIF4A1P60842 406 aaKnown RBP13.82□□□□□ -0.2
TCF4-206ENST00000537856 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
TCF4-206ENST00000537856 NLGN2Q8NFZ4 835 aa13.82□□□□□ -0.2
TCF4-206ENST00000537856 USP16Q9Y5T5 823 aa13.82□□□□□ -0.2
TCF4-206ENST00000537856 MYH14Q7Z406 1995 aaKnown RBP13.82□□□□□ -0.2
TCF4-206ENST00000537856 GIGYF1O75420 1035 aaPredicted RBP13.82□□□□□ -0.2
TCF4-206ENST00000537856 A1BGP04217 495 aa13.82□□□□□ -0.2
TCF4-206ENST00000537856 NCBP3Q53F19 620 aaKnown RBP13.82□□□□□ -0.2
TCF4-206ENST00000537856 SETDB2Q96T68 719 aa13.82□□□□□ -0.2
TCF4-206ENST00000537856 KIF6Q6ZMV9 814 aa13.81□□□□□ -0.2
TCF4-206ENST00000537856 MRS2Q9HD23 443 aa13.81□□□□□ -0.2
TCF4-206ENST00000537856 C4AP0C0L4 1744 aa13.8□□□□□ -0.2
TCF4-206ENST00000537856 POLRMTO00411 1230 aaKnown RBP13.8□□□□□ -0.2
TCF4-206ENST00000537856 SERPINB2P05120 415 aa13.8□□□□□ -0.2
TCF4-206ENST00000537856 MIS18AQ9NYP9 233 aa13.8□□□□□ -0.2
TCF4-206ENST00000537856 PIM2Q9P1W9 311 aa13.8□□□□□ -0.2
TCF4-206ENST00000537856 C10orf71Q711Q0 1435 aa13.8□□□□□ -0.2
TCF4-206ENST00000537856 GNAI1P63096 354 aa13.8□□□□□ -0.2
TCF4-206ENST00000537856 NFIXQ14938 502 aa13.8□□□□□ -0.2
TCF4-206ENST00000537856 NGEFQ8N5V2 710 aa13.8□□□□□ -0.2
TCF4-206ENST00000537856 TBC1D2BQ9UPU7 963 aa13.8□□□□□ -0.2
TCF4-206ENST00000537856 CARMIL3Q8ND23 1372 aa13.79□□□□□ -0.2
TCF4-206ENST00000537856 HOXB7P09629 217 aa13.79□□□□□ -0.2
TCF4-206ENST00000537856 PDE6BP35913 854 aa13.79□□□□□ -0.2
TCF4-206ENST00000537856 ST5P78524 1137 aa13.79□□□□□ -0.2
TCF4-206ENST00000537856 ERVV-1B6SEH8 477 aa13.78□□□□□ -0.2
TCF4-206ENST00000537856 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
TCF4-206ENST00000537856 THUMPD2Q9BTF0 503 aaKnown RBP13.78□□□□□ -0.2
TCF4-206ENST00000537856 RRP7AQ9Y3A4 280 aaKnown RBP13.78□□□□□ -0.2
TCF4-206ENST00000537856 LAS1LQ9Y4W2 734 aaKnown RBP13.78□□□□□ -0.2
TCF4-206ENST00000537856 DLG5Q8TDM6 1919 aa13.78□□□□□ -0.2
TCF4-206ENST00000537856 CHL1O00533 1208 aa13.78□□□□□ -0.2
TCF4-206ENST00000537856 NEFLP07196 543 aa13.78□□□□□ -0.2
TCF4-206ENST00000537856 H0YIN7 160 aa13.77□□□□□ -0.21
TCF4-206ENST00000537856 APAF1O14727 1248 aa13.77□□□□□ -0.21
TCF4-206ENST00000537856 CAMTA2O94983 1202 aa13.77□□□□□ -0.21
TCF4-206ENST00000537856 DDR1Q08345 913 aa13.77□□□□□ -0.21
TCF4-206ENST00000537856 DALRD3Q5D0E6 543 aaKnown RBP13.77□□□□□ -0.21
TCF4-206ENST00000537856 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
TCF4-206ENST00000537856 TPTE2Q6XPS3 522 aa13.76□□□□□ -0.21
TCF4-206ENST00000537856 BICDL1Q6ZP65 573 aa13.76□□□□□ -0.21
TCF4-206ENST00000537856 NYXQ9GZU5 481 aa13.76□□□□□ -0.21
TCF4-206ENST00000537856 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
TCF4-206ENST00000537856 KDM3BQ7LBC6 1761 aa13.76□□□□□ -0.21
TCF4-206ENST00000537856 CCDC27Q2M243 656 aa13.76□□□□□ -0.21
TCF4-206ENST00000537856 CNBD1Q8NA66 436 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms