RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 COL5A3P25940 1745 aaPredicted RBP31.21■■■□□ 2.59
HMGA2-208ENST00000537429 STARD3NLO95772 234 aa31.21■■■□□ 2.59
HMGA2-208ENST00000537429 CHMP4AQ9BY43 222 aa31.21■■■□□ 2.59
HMGA2-208ENST00000537429 TAF1LQ8IZX4 1826 aa31.2■■■□□ 2.58
HMGA2-208ENST00000537429 CCDC30Q5VVM6 783 aa31.19■■■□□ 2.58
HMGA2-208ENST00000537429 NECTIN2Q92692 538 aa31.19■■■□□ 2.58
HMGA2-208ENST00000537429 EZH2Q15910 746 aaKnown RBP31.19■■■□□ 2.58
HMGA2-208ENST00000537429 LINC00116Q8NCU8 138 aa31.19■■■□□ 2.58
HMGA2-208ENST00000537429 RARSP54136 660 aaKnown RBP31.17■■■□□ 2.58
HMGA2-208ENST00000537429 A1BGP04217 495 aa31.16■■■□□ 2.58
HMGA2-208ENST00000537429 ALDH1L2Q3SY69 923 aa31.16■■■□□ 2.58
HMGA2-208ENST00000537429 ERBB4Q15303 1308 aa31.15■■■□□ 2.58
HMGA2-208ENST00000537429 TCERG1O14776 1098 aaKnown RBP31.14■■■□□ 2.58
HMGA2-208ENST00000537429 CRKLP46109 303 aaKnown RBP31.14■■■□□ 2.58
HMGA2-208ENST00000537429 PDIA6Q15084 440 aa31.14■■■□□ 2.58
HMGA2-208ENST00000537429 SSH1Q8WYL5 1049 aa31.14■■■□□ 2.58
HMGA2-208ENST00000537429 HMGB2P26583 209 aaKnown RBP31.14■■■□□ 2.57
HMGA2-208ENST00000537429 INTS5Q6P9B9 1019 aaKnown RBP31.14■■■□□ 2.57
HMGA2-208ENST00000537429 CHPF2Q9P2E5 772 aa31.14■■■□□ 2.57
HMGA2-208ENST00000537429 DBF4Q9UBU7 674 aaPredicted RBP31.14■■■□□ 2.57
HMGA2-208ENST00000537429 RCAN3Q9UKA8 241 aa31.14■■■□□ 2.57
HMGA2-208ENST00000537429 CNTNAP4Q9C0A0 1308 aa31.13■■■□□ 2.57
HMGA2-208ENST00000537429 RC3H1Q5TC82 1133 aaKnown RBP31.13■■■□□ 2.57
HMGA2-208ENST00000537429 RREB1Q92766 1687 aa31.13■■■□□ 2.57
HMGA2-208ENST00000537429 DDX21Q9NR30 783 aaKnown RBP eCLIP31.13■■■□□ 2.57
HMGA2-208ENST00000537429 MYH14Q7Z406 1995 aaKnown RBP31.12■■■□□ 2.57
HMGA2-208ENST00000537429 C4BP0C0L5 1744 aa31.12■■■□□ 2.57
HMGA2-208ENST00000537429 NBPF26B4DH59 902 aa31.12■■■□□ 2.57
HMGA2-208ENST00000537429 NBPF14Q5TI25 921 aa31.12■■■□□ 2.57
HMGA2-208ENST00000537429 NBPF10Q6P3W6 841 aaKnown RBP31.12■■■□□ 2.57
HMGA2-208ENST00000537429 NBPF15Q8N660 670 aa31.12■■■□□ 2.57
HMGA2-208ENST00000537429 STK31Q9BXU1 1019 aa31.12■■■□□ 2.57
HMGA2-208ENST00000537429 CCDC87Q9NVE4 849 aa31.12■■■□□ 2.57
HMGA2-208ENST00000537429 ZBTB1Q9Y2K1 713 aa31.11■■■□□ 2.57
HMGA2-208ENST00000537429 SLC4A2P04920 1241 aa31.1■■■□□ 2.57
HMGA2-208ENST00000537429 PIP4K2AP48426 406 aaPredicted RBP31.1■■■□□ 2.57
HMGA2-208ENST00000537429 BCL2L13Q9BXK5 485 aa31.1■■■□□ 2.57
HMGA2-208ENST00000537429 CENPBP07199 599 aaPredicted RBP31.09■■■□□ 2.57
HMGA2-208ENST00000537429 PROSER3Q2NL68 480 aa31.09■■■□□ 2.57
HMGA2-208ENST00000537429 SMC4Q9NTJ3 1288 aa31.09■■■□□ 2.57
HMGA2-208ENST00000537429 ANXA1P04083 346 aa31.08■■■□□ 2.57
HMGA2-208ENST00000537429 LRP10Q7Z4F1 713 aa31.08■■■□□ 2.57
HMGA2-208ENST00000537429 MRPL50Q8N5N7 158 aaKnown RBP31.08■■■□□ 2.57
HMGA2-208ENST00000537429 CACNA1FO60840 1977 aa31.08■■■□□ 2.57
HMGA2-208ENST00000537429 BCAR3O75815 825 aa31.08■■■□□ 2.57
HMGA2-208ENST00000537429 BRPF1P55201 1214 aaPredicted RBP31.08■■■□□ 2.57
HMGA2-208ENST00000537429 MYL6BP14649 208 aa31.07■■■□□ 2.56
HMGA2-208ENST00000537429 CANXP27824 592 aaKnown RBP31.07■■■□□ 2.56
HMGA2-208ENST00000537429 HYPKQ9NX55 129 aa31.06■■■□□ 2.56
HMGA2-208ENST00000537429 IL6STP40189 918 aaPredicted RBP31.05■■■□□ 2.56
HMGA2-208ENST00000537429 NUP188Q5SRE5 1749 aa31.05■■■□□ 2.56
HMGA2-208ENST00000537429 RPS6KA4O75676 772 aa31.03■■■□□ 2.56
HMGA2-208ENST00000537429 AK7Q96M32 723 aa31.03■■■□□ 2.56
HMGA2-208ENST00000537429 PHAXQ9H814 394 aaKnown RBP31.03■■■□□ 2.56
HMGA2-208ENST00000537429 EIF5P55010 431 aaKnown RBP31.03■■■□□ 2.56
HMGA2-208ENST00000537429 G2E3Q7L622 706 aa31.03■■■□□ 2.56
HMGA2-208ENST00000537429 AKT1S1Q96B36 256 aa31.03■■■□□ 2.56
HMGA2-208ENST00000537429 GNPATO15228 680 aa31.02■■■□□ 2.56
HMGA2-208ENST00000537429 ZNF330Q9Y3S2 320 aaPredicted RBP31.01■■■□□ 2.55
HMGA2-208ENST00000537429 ZNF827Q17R98 1081 aa31■■■□□ 2.55
HMGA2-208ENST00000537429 RTCBQ9Y3I0 505 aaKnown RBP31■■■□□ 2.55
HMGA2-208ENST00000537429 UBR3Q6ZT12 1888 aa30.99■■■□□ 2.55
HMGA2-208ENST00000537429 FLIIQ13045 1269 aa30.98■■■□□ 2.55
HMGA2-208ENST00000537429 COPS6Q7L5N1 327 aa30.98■■■□□ 2.55
HMGA2-208ENST00000537429 NPM2Q86SE8 214 aaKnown RBP30.98■■■□□ 2.55
HMGA2-208ENST00000537429 AMIGO3Q86WK7 504 aa30.98■■■□□ 2.55
HMGA2-208ENST00000537429 KIF16BQ96L93 1317 aa30.98■■■□□ 2.55
HMGA2-208ENST00000537429 XAGE3Q8WTP9 111 aa30.98■■■□□ 2.55
HMGA2-208ENST00000537429 ANO8Q9HCE9 1232 aaPredicted RBP30.97■■■□□ 2.55
HMGA2-208ENST00000537429 NOB1Q9ULX3 412 aaKnown RBP30.97■■■□□ 2.55
HMGA2-208ENST00000537429 COL15A1P39059 1388 aa30.96■■■□□ 2.55
HMGA2-208ENST00000537429 AIMP1Q12904 312 aaKnown RBP30.96■■■□□ 2.55
HMGA2-208ENST00000537429 STK32BQ9NY57 414 aa30.96■■■□□ 2.55
HMGA2-208ENST00000537429 TFCP2L1Q9NZI6 479 aa30.96■■■□□ 2.55
HMGA2-208ENST00000537429 SMIM5Q71RC9 77 aa30.95■■■□□ 2.55
HMGA2-208ENST00000537429 PTPRCP08575 1304 aa30.95■■■□□ 2.55
HMGA2-208ENST00000537429 SSFA2P28290 1259 aa30.94■■■□□ 2.54
HMGA2-208ENST00000537429 SLC15A2Q16348 729 aa30.94■■■□□ 2.54
HMGA2-208ENST00000537429 TTLL7Q6ZT98 887 aa30.94■■■□□ 2.54
HMGA2-208ENST00000537429 ARXQ96QS3 562 aa30.94■■■□□ 2.54
HMGA2-208ENST00000537429 FRAT1Q92837 279 aaPredicted RBP30.93■■■□□ 2.54
HMGA2-208ENST00000537429 PHF14O94880 888 aa30.93■■■□□ 2.54
HMGA2-208ENST00000537429 ADRA2BP18089 450 aa30.93■■■□□ 2.54
HMGA2-208ENST00000537429 FKBP5Q13451 457 aaPredicted RBP30.93■■■□□ 2.54
HMGA2-208ENST00000537429 ARHGAP45Q92619 1136 aa30.93■■■□□ 2.54
HMGA2-208ENST00000537429 A0A087WZG4 1122 aa30.92■■■□□ 2.54
HMGA2-208ENST00000537429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.92■■■□□ 2.54
HMGA2-208ENST00000537429 TRAPPC3LQ5T215 181 aa30.92■■■□□ 2.54
HMGA2-208ENST00000537429 DZIP3Q86Y13 1208 aaKnown RBP30.92■■■□□ 2.54
HMGA2-208ENST00000537429 TUBGCP6Q96RT7 1819 aa30.92■■■□□ 2.54
HMGA2-208ENST00000537429 IPO8O15397 1037 aaKnown RBP30.91■■■□□ 2.54
HMGA2-208ENST00000537429 ARHGEF1Q92888 912 aaKnown RBP30.91■■■□□ 2.54
HMGA2-208ENST00000537429 DDX58O95786 925 aaKnown RBP30.9■■■□□ 2.54
HMGA2-208ENST00000537429 ANKRD13DQ6ZTN6 518 aa30.9■■■□□ 2.54
HMGA2-208ENST00000537429 TBC1D2BQ9UPU7 963 aa30.9■■■□□ 2.54
HMGA2-208ENST00000537429 SOCS7O14512 581 aa30.89■■■□□ 2.54
HMGA2-208ENST00000537429 ZKSCAN2Q63HK3 967 aa30.89■■■□□ 2.54
HMGA2-208ENST00000537429 SUPT16HQ9Y5B9 1047 aaKnown RBP30.89■■■□□ 2.54
HMGA2-208ENST00000537429 RNF123Q5XPI4 1314 aa30.89■■■□□ 2.53
HMGA2-208ENST00000537429 KSR2Q6VAB6 950 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms