RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TTLL6Q8N841 843 aa13.78□□□□□ -0.2
CPSF7-217ENST00000537162 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
CPSF7-217ENST00000537162 ADAMTS7Q9UKP4 1686 aa13.78□□□□□ -0.2
CPSF7-217ENST00000537162 TM4SF1P30408 202 aa13.77□□□□□ -0.21
CPSF7-217ENST00000537162 AMPHP49418 695 aa13.77□□□□□ -0.21
CPSF7-217ENST00000537162 ZNF831Q5JPB2 1677 aa13.77□□□□□ -0.21
CPSF7-217ENST00000537162 NRXN2Q9P2S2 1712 aa13.77□□□□□ -0.21
CPSF7-217ENST00000537162 USP42Q9H9J4 1324 aaKnown RBP13.76□□□□□ -0.21
CPSF7-217ENST00000537162 NKX1-1Q15270 411 aaPredicted RBP13.76□□□□□ -0.21
CPSF7-217ENST00000537162 RC3H1Q5TC82 1133 aaKnown RBP13.76□□□□□ -0.21
CPSF7-217ENST00000537162 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
CPSF7-217ENST00000537162 TMOD3Q9NYL9 352 aa13.76□□□□□ -0.21
CPSF7-217ENST00000537162 CNTNAP4Q9C0A0 1308 aa13.75□□□□□ -0.21
CPSF7-217ENST00000537162 IQCA1LA6NCM1 817 aa13.75□□□□□ -0.21
CPSF7-217ENST00000537162 CARMIL3Q8ND23 1372 aa13.74□□□□□ -0.21
CPSF7-217ENST00000537162 C21orf2O43822 256 aa13.74□□□□□ -0.21
CPSF7-217ENST00000537162 ECE1P42892 770 aa13.74□□□□□ -0.21
CPSF7-217ENST00000537162 FXR1P51114 621 aaKnown RBP eCLIP13.74□□□□□ -0.21
CPSF7-217ENST00000537162 GCC1Q96CN9 775 aa13.74□□□□□ -0.21
CPSF7-217ENST00000537162 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
CPSF7-217ENST00000537162 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
CPSF7-217ENST00000537162 C2CD5Q86YS7 1000 aa13.73□□□□□ -0.21
CPSF7-217ENST00000537162 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
CPSF7-217ENST00000537162 CST9Q5W186 159 aa13.72□□□□□ -0.21
CPSF7-217ENST00000537162 COL11A2P13942 1736 aaPredicted RBP13.72□□□□□ -0.21
CPSF7-217ENST00000537162 SMG6Q86US8 1419 aaKnown RBP13.72□□□□□ -0.21
CPSF7-217ENST00000537162 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
CPSF7-217ENST00000537162 TRPM7Q96QT4 1865 aa13.72□□□□□ -0.21
CPSF7-217ENST00000537162 ZNF541Q9H0D2 1346 aa13.71□□□□□ -0.21
CPSF7-217ENST00000537162 EPHX2P34913 555 aa13.71□□□□□ -0.21
CPSF7-217ENST00000537162 MAP2K2P36507 400 aa13.71□□□□□ -0.21
CPSF7-217ENST00000537162 RRS1Q15050 365 aaKnown RBP13.71□□□□□ -0.21
CPSF7-217ENST00000537162 CACNA1SQ13698 1873 aa13.71□□□□□ -0.21
CPSF7-217ENST00000537162 CA12O43570 354 aa13.7□□□□□ -0.22
CPSF7-217ENST00000537162 SLC12A5Q9H2X9 1139 aa13.7□□□□□ -0.22
CPSF7-217ENST00000537162 HACL1Q9UJ83 578 aa13.7□□□□□ -0.22
CPSF7-217ENST00000537162 USPL1Q5W0Q7 1092 aa13.69□□□□□ -0.22
CPSF7-217ENST00000537162 TLL2Q9Y6L7 1015 aa13.69□□□□□ -0.22
CPSF7-217ENST00000537162 RNF123Q5XPI4 1314 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 LTBP3Q9NS15 1303 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 TJP1Q07157 1748 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 TRAF5O00463 557 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 CRKLP46109 303 aaKnown RBP13.68□□□□□ -0.22
CPSF7-217ENST00000537162 NFIXQ14938 502 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 CIAPIN1Q6FI81 312 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 NBPF15Q8N660 670 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 ZIC5Q96T25 663 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 TAOK3Q9H2K8 898 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 A0A1W2PP64 1363 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 RTL1A6NKG5 1358 aa13.68□□□□□ -0.22
CPSF7-217ENST00000537162 SLX4Q8IY92 1834 aa13.67□□□□□ -0.22
CPSF7-217ENST00000537162 H0YIN7 160 aa13.67□□□□□ -0.22
CPSF7-217ENST00000537162 BRPF1P55201 1214 aaPredicted RBP13.67□□□□□ -0.22
CPSF7-217ENST00000537162 TMC1Q8TDI8 760 aa13.67□□□□□ -0.22
CPSF7-217ENST00000537162 HSP90AB2PQ58FF8 381 aa13.66□□□□□ -0.22
CPSF7-217ENST00000537162 HDGFL2Q7Z4V5 671 aaPredicted RBP13.66□□□□□ -0.22
CPSF7-217ENST00000537162 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■□□□□ 9.3
CPSF7-217ENST00000537162 SERPINB2P05120 415 aa13.65□□□□□ -0.22
CPSF7-217ENST00000537162 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
CPSF7-217ENST00000537162 COG3Q96JB2 828 aa13.64□□□□□ -0.23
CPSF7-217ENST00000537162 SZT2Q5T011 3432 aa13.64□□□□□ -0.23
CPSF7-217ENST00000537162 SCN11AQ9UI33 1791 aa13.63□□□□□ -0.23
CPSF7-217ENST00000537162 PHKG2P15735 406 aa13.63□□□□□ -0.23
CPSF7-217ENST00000537162 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
CPSF7-217ENST00000537162 BCL2L12Q9HB09 334 aa13.63□□□□□ -0.23
CPSF7-217ENST00000537162 SAPCD2Q86UD0 394 aa13.62□□□□□ -0.23
CPSF7-217ENST00000537162 CCDC24Q8N4L8 307 aa13.62□□□□□ -0.23
CPSF7-217ENST00000537162 SPG7Q9UQ90 795 aa13.62□□□□□ -0.23
CPSF7-217ENST00000537162 NCAPD2Q15021 1401 aa13.62□□□□□ -0.23
CPSF7-217ENST00000537162 INSRP06213 1382 aa13.61□□□□□ -0.23
CPSF7-217ENST00000537162 RAB3GAP2Q9H2M9 1393 aa13.61□□□□□ -0.23
CPSF7-217ENST00000537162 ARFGEF2Q9Y6D5 1785 aa13.61□□□□□ -0.23
CPSF7-217ENST00000537162 PTCD1O75127 700 aaKnown RBP13.61□□□□□ -0.23
CPSF7-217ENST00000537162 SLC17A8Q8NDX2 589 aa13.61□□□□□ -0.23
CPSF7-217ENST00000537162 HPS5Q9UPZ3 1129 aa13.61□□□□□ -0.23
CPSF7-217ENST00000537162 MKI67P46013 3256 aaKnown RBP13.6□□□□□ -0.23
CPSF7-217ENST00000537162 ZPR1O75312 459 aa13.6□□□□□ -0.23
CPSF7-217ENST00000537162 A0A0C4DFX4 3053 aa13.59□□□□□ -0.23
CPSF7-217ENST00000537162 KCNA4P22459 653 aa13.59□□□□□ -0.23
CPSF7-217ENST00000537162 IFNL2Q8IZJ0 200 aa13.59□□□□□ -0.23
CPSF7-217ENST00000537162 ZNF277Q9NRM2 450 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-217ENST00000537162 TERF2IPQ9NYB0 399 aa13.58□□□□□ -0.24
CPSF7-217ENST00000537162 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
CPSF7-217ENST00000537162 BICDL1Q6ZP65 573 aa13.57□□□□□ -0.24
CPSF7-217ENST00000537162 SOS1Q07889 1333 aaPredicted RBP13.57□□□□□ -0.24
CPSF7-217ENST00000537162 CELF2O95319 508 aaKnown RBP13.56□□□□□ -0.24
CPSF7-217ENST00000537162 EPS15P42566 896 aa13.56□□□□□ -0.24
CPSF7-217ENST00000537162 OLFM4Q6UX06 510 aa13.56□□□□□ -0.24
CPSF7-217ENST00000537162 CTU1Q7Z7A3 348 aaKnown RBP13.56□□□□□ -0.24
CPSF7-217ENST00000537162 NARFQ9UHQ1 456 aa13.56□□□□□ -0.24
CPSF7-217ENST00000537162 FZD9O00144 591 aa13.55□□□□□ -0.24
CPSF7-217ENST00000537162 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-217ENST00000537162 COL4A5P29400 1685 aa13.55□□□□□ -0.24
CPSF7-217ENST00000537162 FLT4P35916 1363 aa13.55□□□□□ -0.24
CPSF7-217ENST00000537162 BCORQ6W2J9 1755 aa13.55□□□□□ -0.24
CPSF7-217ENST00000537162 ERVV-2B6SEH9 535 aa13.54□□□□□ -0.24
CPSF7-217ENST00000537162 GPC2Q8N158 579 aa13.54□□□□□ -0.24
CPSF7-217ENST00000537162 C7orf43Q8WVR3 580 aa13.54□□□□□ -0.24
CPSF7-217ENST00000537162 HHIPL1Q96JK4 782 aa13.54□□□□□ -0.24
CPSF7-217ENST00000537162 BRIP1Q9BX63 1249 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms