RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
CLIP1-207ENST00000536634 VSIG8P0DPA2 414 aa10.58□□□□□ -0.72
CLIP1-207ENST00000536634 ANKMY2Q8IV38 441 aa10.58□□□□□ -0.72
CLIP1-207ENST00000536634 IRF7Q92985 503 aa10.58□□□□□ -0.72
CLIP1-207ENST00000536634 M0R2N6 131 aa10.57□□□□□ -0.72
CLIP1-207ENST00000536634 SEC13P55735 322 aa10.57□□□□□ -0.72
CLIP1-207ENST00000536634 RIPOR1Q6ZS17 1223 aa10.57□□□□□ -0.72
CLIP1-207ENST00000536634 SLC9A9Q8IVB4 645 aa10.57□□□□□ -0.72
CLIP1-207ENST00000536634 GPR161Q8N6U8 529 aaKnown RBP10.57□□□□□ -0.72
CLIP1-207ENST00000536634 NIFKQ9BYG3 293 aaKnown RBP10.57□□□□□ -0.72
CLIP1-207ENST00000536634 CDC14CA4D256 554 aa10.56□□□□□ -0.72
CLIP1-207ENST00000536634 LGR5O75473 907 aa10.56□□□□□ -0.72
CLIP1-207ENST00000536634 GMPRP36959 345 aa10.56□□□□□ -0.72
CLIP1-207ENST00000536634 VWA5B2Q8N398 1253 aa10.56□□□□□ -0.72
CLIP1-207ENST00000536634 ZDHHC1Q8WTX9 485 aa10.56□□□□□ -0.72
CLIP1-207ENST00000536634 NANOS1Q8WY41 292 aaKnown RBP10.56□□□□□ -0.72
CLIP1-207ENST00000536634 TSPAN10Q9H1Z9 355 aaPredicted RBP10.56□□□□□ -0.72
CLIP1-207ENST00000536634 GPAMQ9HCL2 828 aa10.56□□□□□ -0.72
CLIP1-207ENST00000536634 RBM19Q9Y4C8 960 aaKnown RBP10.56□□□□□ -0.72
CLIP1-207ENST00000536634 PARP3Q9Y6F1 533 aa10.56□□□□□ -0.72
CLIP1-207ENST00000536634 DCAF1Q9Y4B6 1507 aa10.55□□□□□ -0.72
CLIP1-207ENST00000536634 A0A1B0GTH6 734 aa10.55□□□□□ -0.72
CLIP1-207ENST00000536634 F11P03951 625 aa10.55□□□□□ -0.72
CLIP1-207ENST00000536634 MSX1P28360 303 aa10.55□□□□□ -0.72
CLIP1-207ENST00000536634 CABP1Q9NZU7 370 aa10.55□□□□□ -0.72
CLIP1-207ENST00000536634 DBN1Q16643 649 aa10.54□□□□□ -0.72
CLIP1-207ENST00000536634 ZNF837Q96EG3 531 aaPredicted RBP10.54□□□□□ -0.72
CLIP1-207ENST00000536634 THBS1P07996 1170 aa10.53□□□□□ -0.72
CLIP1-207ENST00000536634 TRIM22Q8IYM9 498 aa10.53□□□□□ -0.72
CLIP1-207ENST00000536634 ZMIZ1Q9ULJ6 1067 aa10.53□□□□□ -0.72
CLIP1-207ENST00000536634 NOVA2Q9UNW9 492 aaKnown RBP10.53□□□□□ -0.72
CLIP1-207ENST00000536634 C21orf2O43822 256 aa10.52□□□□□ -0.73
CLIP1-207ENST00000536634 ATP4AP20648 1035 aa10.52□□□□□ -0.73
CLIP1-207ENST00000536634 SH3PXD2AQ5TCZ1 1133 aa10.52□□□□□ -0.73
CLIP1-207ENST00000536634 SV2AQ7L0J3 742 aa10.52□□□□□ -0.73
CLIP1-207ENST00000536634 GAS2L2Q8NHY3 880 aa10.52□□□□□ -0.73
CLIP1-207ENST00000536634 PBXIP1Q96AQ6 731 aa10.52□□□□□ -0.73
CLIP1-207ENST00000536634 TEAD4Q15561 434 aa10.51□□□□□ -0.73
CLIP1-207ENST00000536634 STK32AQ8WU08 396 aa10.51□□□□□ -0.73
CLIP1-207ENST00000536634 AIDAQ96BJ3 306 aa10.51□□□□□ -0.73
CLIP1-207ENST00000536634 RUBCNLQ9H714 662 aa10.51□□□□□ -0.73
CLIP1-207ENST00000536634 NOS2P35228 1153 aa10.5□□□□□ -0.73
CLIP1-207ENST00000536634 TXLNAP40222 546 aa10.5□□□□□ -0.73
CLIP1-207ENST00000536634 FAM200AQ8TCP9 573 aa10.5□□□□□ -0.73
CLIP1-207ENST00000536634 L3MBTL2Q969R5 705 aa10.5□□□□□ -0.73
CLIP1-207ENST00000536634 HINFPQ9BQA5 517 aa10.5□□□□□ -0.73
CLIP1-207ENST00000536634 ATG7O95352 703 aa10.49□□□□□ -0.73
CLIP1-207ENST00000536634 KRT76Q01546 638 aa10.49□□□□□ -0.73
CLIP1-207ENST00000536634 NUCKS1Q9H1E3 243 aaKnown RBP10.49□□□□□ -0.73
CLIP1-207ENST00000536634 H7C1W4 665 aa10.48□□□□□ -0.73
CLIP1-207ENST00000536634 GPR25O00155 361 aa10.48□□□□□ -0.73
CLIP1-207ENST00000536634 EML1O00423 815 aa10.48□□□□□ -0.73
CLIP1-207ENST00000536634 PSMA6P60900 246 aaKnown RBP10.48□□□□□ -0.73
CLIP1-207ENST00000536634 ELOAQ14241 798 aaKnown RBP10.48□□□□□ -0.73
CLIP1-207ENST00000536634 NBPF1Q3BBV0 1214 aa10.48□□□□□ -0.73
CLIP1-207ENST00000536634 RNFT1Q5M7Z0 435 aa10.48□□□□□ -0.73
CLIP1-207ENST00000536634 SCG3Q8WXD2 468 aaKnown RBP10.48□□□□□ -0.73
CLIP1-207ENST00000536634 GTPBP3Q969Y2 492 aaKnown RBP10.48□□□□□ -0.73
CLIP1-207ENST00000536634 ZNF232Q9UNY5 417 aa10.48□□□□□ -0.73
CLIP1-207ENST00000536634 SERTM1A2A2V5 107 aa10.47□□□□□ -0.73
CLIP1-207ENST00000536634 PPP1R12BO60237 982 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-207ENST00000536634 GMCL1Q96IK5 515 aa10.47□□□□□ -0.73
CLIP1-207ENST00000536634 COL25A1Q9BXS0 654 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-207ENST00000536634 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.73
CLIP1-207ENST00000536634 CSB-PGBD3P0DP91 1061 aa10.46□□□□□ -0.73
CLIP1-207ENST00000536634 UBAP2LQ14157 1087 aaKnown RBP10.46□□□□□ -0.73
CLIP1-207ENST00000536634 POTEAQ6S8J7 498 aa10.46□□□□□ -0.73
CLIP1-207ENST00000536634 PGBD3Q8N328 593 aa10.46□□□□□ -0.73
CLIP1-207ENST00000536634 KLRG1Q96E93 195 aa10.46□□□□□ -0.73
CLIP1-207ENST00000536634 CRISPLD1Q9H336 500 aa10.46□□□□□ -0.73
CLIP1-207ENST00000536634 ZDHHC3Q9NYG2 299 aa10.46□□□□□ -0.73
CLIP1-207ENST00000536634 ATAD2Q6PL18 1390 aa10.46□□□□□ -0.74
CLIP1-207ENST00000536634 FAM69CQ0P6D2 419 aa10.45□□□□□ -0.74
CLIP1-207ENST00000536634 GAS6Q14393 721 aa10.45□□□□□ -0.74
CLIP1-207ENST00000536634 TMEM164Q5U3C3 297 aa10.45□□□□□ -0.74
CLIP1-207ENST00000536634 C1orf216Q8TAB5 229 aa10.45□□□□□ -0.74
CLIP1-207ENST00000536634 CHMP7Q8WUX9 453 aaPredicted RBP10.45□□□□□ -0.74
CLIP1-207ENST00000536634 ARID3AQ99856 593 aa10.45□□□□□ -0.74
CLIP1-207ENST00000536634 TATP17735 454 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-207ENST00000536634 HCN4Q9Y3Q4 1203 aa10.44□□□□□ -0.74
CLIP1-207ENST00000536634 ACIN1Q9UKV3 1341 aaKnown RBP10.43□□□□□ -0.74
CLIP1-207ENST00000536634 WEE1P30291 646 aa10.43□□□□□ -0.74
CLIP1-207ENST00000536634 HIRAP54198 1017 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-207ENST00000536634 ARSJQ5FYB0 599 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-207ENST00000536634 CNTNAP3BQ96NU0 1288 aa10.43□□□□□ -0.74
CLIP1-207ENST00000536634 ZIC5Q96T25 663 aa10.43□□□□□ -0.74
CLIP1-207ENST00000536634 C2orf49Q9BVC5 232 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-207ENST00000536634 CNTNAP3Q9BZ76 1288 aa10.43□□□□□ -0.74
CLIP1-207ENST00000536634 A0A1W2PNR3 127 aa10.42□□□□□ -0.74
CLIP1-207ENST00000536634 IGFBP4P22692 258 aa10.42□□□□□ -0.74
CLIP1-207ENST00000536634 LBRQ14739 615 aaKnown RBP10.42□□□□□ -0.74
CLIP1-207ENST00000536634 EFHC2Q5JST6 749 aa10.42□□□□□ -0.74
CLIP1-207ENST00000536634 C7orf43Q8WVR3 580 aa10.42□□□□□ -0.74
CLIP1-207ENST00000536634 CHMP3Q9Y3E7 222 aa10.42□□□□□ -0.74
CLIP1-207ENST00000536634 CUX2O14529 1486 aa10.42□□□□□ -0.74
CLIP1-207ENST00000536634 FOXR1Q6PIV2 292 aa10.41□□□□□ -0.74
CLIP1-207ENST00000536634 STAG2Q8N3U4 1231 aa10.41□□□□□ -0.74
CLIP1-207ENST00000536634 PRIMPOLQ96LW4 560 aa10.41□□□□□ -0.74
CLIP1-207ENST00000536634 PHACTR1Q9C0D0 580 aa10.41□□□□□ -0.74
CLIP1-207ENST00000536634 LORP23490 312 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms