RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 NLRP2Q9NX02 1062 aa9.7□□□□□ -0.86
CPSF7-216ENST00000536548 PCDHB15Q9Y5E8 787 aa9.7□□□□□ -0.86
CPSF7-216ENST00000536548 KCPQ6ZWJ8 1503 aa9.7□□□□□ -0.86
CPSF7-216ENST00000536548 ESPNB1AK53 854 aa9.69□□□□□ -0.86
CPSF7-216ENST00000536548 NSD2O96028 1365 aa9.69□□□□□ -0.86
CPSF7-216ENST00000536548 ERBB3P21860 1342 aa9.69□□□□□ -0.86
CPSF7-216ENST00000536548 USP54Q70EL1 1684 aa9.69□□□□□ -0.86
CPSF7-216ENST00000536548 FTSJ3Q8IY81 847 aaKnown RBP9.69□□□□□ -0.86
CPSF7-216ENST00000536548 DZIP1LQ8IYY4 767 aaKnown RBP9.69□□□□□ -0.86
CPSF7-216ENST00000536548 DOT1LQ8TEK3 1739 aa9.69□□□□□ -0.86
CPSF7-216ENST00000536548 DDX19BQ9UMR2 479 aa9.69□□□□□ -0.86
CPSF7-216ENST00000536548 BCS1LQ9Y276 419 aa9.69□□□□□ -0.86
CPSF7-216ENST00000536548 C5P01031 1676 aa9.68□□□□□ -0.86
CPSF7-216ENST00000536548 KIF16BQ96L93 1317 aa9.68□□□□□ -0.86
CPSF7-216ENST00000536548 FOXN1O15353 648 aa9.68□□□□□ -0.86
CPSF7-216ENST00000536548 ANP32BQ92688 251 aaKnown RBP9.68□□□□□ -0.86
CPSF7-216ENST00000536548 PKNOX2Q96KN3 472 aa9.68□□□□□ -0.86
CPSF7-216ENST00000536548 CHMP4BQ9H444 224 aaKnown RBP9.68□□□□□ -0.86
CPSF7-216ENST00000536548 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
CPSF7-216ENST00000536548 KIAA1551Q9HCM1 1747 aa9.68□□□□□ -0.86
CPSF7-216ENST00000536548 QRICH2Q9H0J4 1663 aa9.67□□□□□ -0.86
CPSF7-216ENST00000536548 GOLGA6L22H0YM25 854 aa9.67□□□□□ -0.86
CPSF7-216ENST00000536548 RBM25P49756 843 aaKnown RBP9.67□□□□□ -0.86
CPSF7-216ENST00000536548 MFAP1P55081 439 aaKnown RBP9.67□□□□□ -0.86
CPSF7-216ENST00000536548 SRPK2P78362 688 aaKnown RBP9.67□□□□□ -0.86
CPSF7-216ENST00000536548 C9orf131Q5VYM1 1079 aa9.67□□□□□ -0.86
CPSF7-216ENST00000536548 SMC5Q8IY18 1101 aa9.67□□□□□ -0.86
CPSF7-216ENST00000536548 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
CPSF7-216ENST00000536548 GZF1Q9H116 711 aaPredicted RBP9.67□□□□□ -0.86
CPSF7-216ENST00000536548 CABP1Q9NZU7 370 aa9.67□□□□□ -0.86
CPSF7-216ENST00000536548 PKD1L3Q7Z443 1732 aa9.67□□□□□ -0.86
CPSF7-216ENST00000536548 NSD3Q9BZ95 1437 aa9.66□□□□□ -0.86
CPSF7-216ENST00000536548 ANKRD36BQ8N2N9 1353 aa9.66□□□□□ -0.86
CPSF7-216ENST00000536548 TAF1LQ8IZX4 1826 aa9.66□□□□□ -0.86
CPSF7-216ENST00000536548 A0A0G2JLW4 131 aa9.66□□□□□ -0.86
CPSF7-216ENST00000536548 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
CPSF7-216ENST00000536548 CCDC173Q0VFZ6 552 aa9.66□□□□□ -0.86
CPSF7-216ENST00000536548 SMC1BQ8NDV3 1235 aa9.66□□□□□ -0.86
CPSF7-216ENST00000536548 PUS7Q96PZ0 661 aaKnown RBP9.66□□□□□ -0.86
CPSF7-216ENST00000536548 CARD14Q9BXL6 1004 aa9.66□□□□□ -0.86
CPSF7-216ENST00000536548 NFAT5O94916 1531 aa9.66□□□□□ -0.86
CPSF7-216ENST00000536548 PXDNLA1KZ92 1463 aa9.66□□□□□ -0.86
CPSF7-216ENST00000536548 TOGARAM1Q9Y4F4 1720 aa9.65□□□□□ -0.86
CPSF7-216ENST00000536548 IL16Q14005 1332 aa9.65□□□□□ -0.86
CPSF7-216ENST00000536548 PHF14O94880 888 aa9.65□□□□□ -0.86
CPSF7-216ENST00000536548 RLBP1P12271 317 aa9.65□□□□□ -0.86
CPSF7-216ENST00000536548 MLLT1Q03111 559 aaPredicted RBP9.65□□□□□ -0.86
CPSF7-216ENST00000536548 KCNH5Q8NCM2 988 aa9.65□□□□□ -0.86
CPSF7-216ENST00000536548 ZNF692Q9BU19 519 aaPredicted RBP9.65□□□□□ -0.86
CPSF7-216ENST00000536548 PANK2Q9BZ23 570 aa9.65□□□□□ -0.86
CPSF7-216ENST00000536548 TNRC6CQ9HCJ0 1690 aaKnown RBP9.64□□□□□ -0.87
CPSF7-216ENST00000536548 IBTKQ9P2D0 1353 aaPredicted RBP9.64□□□□□ -0.87
CPSF7-216ENST00000536548 IPO8O15397 1037 aaKnown RBP9.64□□□□□ -0.87
CPSF7-216ENST00000536548 DDIT3P35638 169 aa9.64□□□□□ -0.87
CPSF7-216ENST00000536548 TERF1P54274 439 aa9.64□□□□□ -0.87
CPSF7-216ENST00000536548 ABHD8Q96I13 439 aa9.64□□□□□ -0.87
CPSF7-216ENST00000536548 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
CPSF7-216ENST00000536548 RAB3GAP1Q15042 981 aa9.63□□□□□ -0.87
CPSF7-216ENST00000536548 SPRYD3Q8NCJ5 442 aa9.63□□□□□ -0.87
CPSF7-216ENST00000536548 FLAD1Q8NFF5 587 aa9.63□□□□□ -0.87
CPSF7-216ENST00000536548 PRDM10Q9NQV6 1147 aa9.63□□□□□ -0.87
CPSF7-216ENST00000536548 SMC4Q9NTJ3 1288 aa9.63□□□□□ -0.87
CPSF7-216ENST00000536548 UBR3Q6ZT12 1888 aa9.63□□□□□ -0.87
CPSF7-216ENST00000536548 KIF13BQ9NQT8 1826 aa9.63□□□□□ -0.87
CPSF7-216ENST00000536548 LTN1O94822 1766 aa9.63□□□□□ -0.87
CPSF7-216ENST00000536548 BRCA1P38398 1863 aaKnown RBP9.62□□□□□ -0.87
CPSF7-216ENST00000536548 FCHSD2O94868 740 aa9.62□□□□□ -0.87
CPSF7-216ENST00000536548 NEUROD2Q15784 382 aa9.62□□□□□ -0.87
CPSF7-216ENST00000536548 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.62□□□□□ -0.87
CPSF7-216ENST00000536548 VSIG10Q8N0Z9 540 aa9.62□□□□□ -0.87
CPSF7-216ENST00000536548 ANKRD24Q8TF21 1146 aa9.62□□□□□ -0.87
CPSF7-216ENST00000536548 PPP1R9BQ96SB3 815 aa9.62□□□□□ -0.87
CPSF7-216ENST00000536548 MAP7D2Q96T17 732 aa9.62□□□□□ -0.87
CPSF7-216ENST00000536548 RRP7AQ9Y3A4 280 aaKnown RBP9.62□□□□□ -0.87
CPSF7-216ENST00000536548 C10orf71Q711Q0 1435 aa9.62□□□□□ -0.87
CPSF7-216ENST00000536548 C4BP0C0L5 1744 aa9.62□□□□□ -0.87
CPSF7-216ENST00000536548 PLEKHG2Q9H7P9 1386 aa9.62□□□□□ -0.87
CPSF7-216ENST00000536548 SBF1O95248 1867 aa9.62□□□□□ -0.87
CPSF7-216ENST00000536548 TTC21BQ7Z4L5 1316 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.61□□□□□ -0.87
CPSF7-216ENST00000536548 DPEP1P16444 411 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 LBX1P52954 281 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 NUCB1Q02818 461 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 HS1BP3Q53T59 392 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 BMP2KLQ5H9B9 411 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 ATF7IPQ6VMQ6 1270 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 CLEC17AQ6ZS10 378 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 TNPO1Q92973 898 aaKnown RBP9.61□□□□□ -0.87
CPSF7-216ENST00000536548 ZNF428Q96B54 188 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 PDCL3Q9H2J4 239 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 RNF181Q9P0P0 153 aa9.61□□□□□ -0.87
CPSF7-216ENST00000536548 CCDC85CA6NKD9 419 aa9.6□□□□□ -0.87
CPSF7-216ENST00000536548 ALDH1L2Q3SY69 923 aa9.6□□□□□ -0.87
CPSF7-216ENST00000536548 ZSCAN30Q86W11 494 aa9.6□□□□□ -0.87
CPSF7-216ENST00000536548 ITPRIPQ8IWB1 547 aa9.6□□□□□ -0.87
CPSF7-216ENST00000536548 BCL2L13Q9BXK5 485 aa9.6□□□□□ -0.87
CPSF7-216ENST00000536548 TNNQ9UQP3 1299 aa9.6□□□□□ -0.87
CPSF7-216ENST00000536548 ARFGEF1Q9Y6D6 1849 aa9.59□□□□□ -0.87
CPSF7-216ENST00000536548 K7ELQ4 463 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-216ENST00000536548 MMP10P09238 476 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms