RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 KCNQ3O43525 872 aa17.76■□□□□ 0.43
RPAIN-205ENST00000536255 RFC4P35249 363 aa17.76■□□□□ 0.43
RPAIN-205ENST00000536255 TAF7Q15545 349 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-205ENST00000536255 NEUROD2Q15784 382 aa17.76■□□□□ 0.43
RPAIN-205ENST00000536255 APAF1O14727 1248 aa17.75■□□□□ 0.43
RPAIN-205ENST00000536255 STARD3NLO95772 234 aa17.75■□□□□ 0.43
RPAIN-205ENST00000536255 TEX13AQ9BXU3 409 aaPredicted RBP17.75■□□□□ 0.43
RPAIN-205ENST00000536255 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
RPAIN-205ENST00000536255 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
RPAIN-205ENST00000536255 MIER1Q8N108 512 aa17.74■□□□□ 0.43
RPAIN-205ENST00000536255 THUMPD2Q9BTF0 503 aaKnown RBP17.74■□□□□ 0.43
RPAIN-205ENST00000536255 ZBTB1Q9Y2K1 713 aa17.74■□□□□ 0.43
RPAIN-205ENST00000536255 SOS1Q07889 1333 aaPredicted RBP17.73■□□□□ 0.43
RPAIN-205ENST00000536255 KLHL34Q8N239 644 aa17.73■□□□□ 0.43
RPAIN-205ENST00000536255 NLGN1Q8N2Q7 840 aa17.73■□□□□ 0.43
RPAIN-205ENST00000536255 GYS1P13807 737 aa17.72■□□□□ 0.43
RPAIN-205ENST00000536255 USP42Q9H9J4 1324 aaKnown RBP17.72■□□□□ 0.43
RPAIN-205ENST00000536255 COL15A1P39059 1388 aa17.71■□□□□ 0.43
RPAIN-205ENST00000536255 CANXP27824 592 aaKnown RBP17.71■□□□□ 0.43
RPAIN-205ENST00000536255 MIS18AQ9NYP9 233 aa17.71■□□□□ 0.43
RPAIN-205ENST00000536255 SRP68Q9UHB9 627 aaKnown RBP17.71■□□□□ 0.43
RPAIN-205ENST00000536255 MMP10P09238 476 aa17.7■□□□□ 0.42
RPAIN-205ENST00000536255 SNRPA1P09661 255 aaKnown RBP17.7■□□□□ 0.42
RPAIN-205ENST00000536255 CALD1Q05682 793 aaKnown RBP17.7■□□□□ 0.42
RPAIN-205ENST00000536255 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
RPAIN-205ENST00000536255 KDM3BQ7LBC6 1761 aa17.69■□□□□ 0.42
RPAIN-205ENST00000536255 DCAF8L1A6NGE4 600 aa17.69■□□□□ 0.42
RPAIN-205ENST00000536255 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
RPAIN-205ENST00000536255 TRIM35Q9UPQ4 493 aa17.69■□□□□ 0.42
RPAIN-205ENST00000536255 PRAMEF22A3QJZ6 481 aa17.68■□□□□ 0.42
RPAIN-205ENST00000536255 ZPR1O75312 459 aa17.68■□□□□ 0.42
RPAIN-205ENST00000536255 EIF5P55010 431 aaKnown RBP17.68■□□□□ 0.42
RPAIN-205ENST00000536255 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
RPAIN-205ENST00000536255 BABAM1Q9NWV8 329 aa17.68■□□□□ 0.42
RPAIN-205ENST00000536255 CD2APQ9Y5K6 639 aa17.68■□□□□ 0.42
RPAIN-205ENST00000536255 USP16Q9Y5T5 823 aa17.68■□□□□ 0.42
RPAIN-205ENST00000536255 A1BGP04217 495 aa17.67■□□□□ 0.42
RPAIN-205ENST00000536255 IL6STP40189 918 aaPredicted RBP17.67■□□□□ 0.42
RPAIN-205ENST00000536255 FKBP8Q14318 412 aa17.67■□□□□ 0.42
RPAIN-205ENST00000536255 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
RPAIN-205ENST00000536255 NARFQ9UHQ1 456 aa17.67■□□□□ 0.42
RPAIN-205ENST00000536255 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
RPAIN-205ENST00000536255 USPL1Q5W0Q7 1092 aa17.66■□□□□ 0.42
RPAIN-205ENST00000536255 TSPYL4Q9UJ04 414 aa17.66■□□□□ 0.42
RPAIN-205ENST00000536255 A0A087WZG4 1122 aa17.65■□□□□ 0.42
RPAIN-205ENST00000536255 ZNF330Q9Y3S2 320 aaPredicted RBP17.65■□□□□ 0.42
RPAIN-205ENST00000536255 PARP3Q9Y6F1 533 aa17.64■□□□□ 0.41
RPAIN-205ENST00000536255 GIGYF1O75420 1035 aaPredicted RBP17.63■□□□□ 0.41
RPAIN-205ENST00000536255 NPM2Q86SE8 214 aaKnown RBP17.63■□□□□ 0.41
RPAIN-205ENST00000536255 BCL2L12Q9HB09 334 aa17.63■□□□□ 0.41
RPAIN-205ENST00000536255 LAMB4A4D0S4 1761 aa17.63■□□□□ 0.41
RPAIN-205ENST00000536255 PIP4K2AP48426 406 aaPredicted RBP17.62■□□□□ 0.41
RPAIN-205ENST00000536255 DDR1Q08345 913 aa17.62■□□□□ 0.41
RPAIN-205ENST00000536255 WWC1Q8IX03 1113 aa17.62■□□□□ 0.41
RPAIN-205ENST00000536255 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
RPAIN-205ENST00000536255 LAS1LQ9Y4W2 734 aaKnown RBP17.62■□□□□ 0.41
RPAIN-205ENST00000536255 C10orf71Q711Q0 1435 aa17.62■□□□□ 0.41
RPAIN-205ENST00000536255 CHL1O00533 1208 aa17.61■□□□□ 0.41
RPAIN-205ENST00000536255 TM4SF1P30408 202 aa17.61■□□□□ 0.41
RPAIN-205ENST00000536255 GNAI1P63096 354 aa17.61■□□□□ 0.41
RPAIN-205ENST00000536255 IFT57Q9NWB7 429 aa17.61■□□□□ 0.41
RPAIN-205ENST00000536255 TBC1D2BQ9UPU7 963 aa17.61■□□□□ 0.41
RPAIN-205ENST00000536255 SCN7AQ01118 1682 aa17.61■□□□□ 0.41
RPAIN-205ENST00000536255 NBPF26B4DH59 902 aa17.6■□□□□ 0.41
RPAIN-205ENST00000536255 POLRMTO00411 1230 aaKnown RBP17.6■□□□□ 0.41
RPAIN-205ENST00000536255 NFIXQ14938 502 aa17.6■□□□□ 0.41
RPAIN-205ENST00000536255 GPR162Q16538 588 aa17.6■□□□□ 0.41
RPAIN-205ENST00000536255 NBPF10Q6P3W6 841 aaKnown RBP17.6■□□□□ 0.41
RPAIN-205ENST00000536255 NBPF15Q8N660 670 aa17.6■□□□□ 0.41
RPAIN-205ENST00000536255 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
RPAIN-205ENST00000536255 KIF13BQ9NQT8 1826 aa17.59■□□□□ 0.41
RPAIN-205ENST00000536255 DZIP3Q86Y13 1208 aaKnown RBP17.59■□□□□ 0.41
RPAIN-205ENST00000536255 PELP1Q8IZL8 1130 aaKnown RBP17.59■□□□□ 0.41
RPAIN-205ENST00000536255 GOLGB1Q14789 3259 aaKnown RBP17.58■□□□□ 0.41
RPAIN-205ENST00000536255 IL16Q14005 1332 aa17.58■□□□□ 0.4
RPAIN-205ENST00000536255 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.4
RPAIN-205ENST00000536255 CAMTA2O94983 1202 aa17.58■□□□□ 0.4
RPAIN-205ENST00000536255 WDR63Q8IWG1 891 aa17.58■□□□□ 0.4
RPAIN-205ENST00000536255 UTRNP46939 3433 aa17.58■□□□□ 0.4
RPAIN-205ENST00000536255 PXDNLA1KZ92 1463 aa17.57■□□□□ 0.4
RPAIN-205ENST00000536255 ZNF853P0CG23 659 aa17.57■□□□□ 0.4
RPAIN-205ENST00000536255 YBX3P16989 372 aaKnown RBP eCLIP17.56■□□□□ 0.41e-7■□□□□ 10.3
RPAIN-205ENST00000536255 TGFB2P61812 414 aa17.56■□□□□ 0.4
RPAIN-205ENST00000536255 TBC1D9BQ66K14 1250 aa17.56■□□□□ 0.4
RPAIN-205ENST00000536255 MBIPQ9NS73 344 aa17.56■□□□□ 0.4
RPAIN-205ENST00000536255 BCORQ6W2J9 1755 aa17.56■□□□□ 0.4
RPAIN-205ENST00000536255 ERBB4Q15303 1308 aa17.55■□□□□ 0.4
RPAIN-205ENST00000536255 BICDL1Q6ZP65 573 aa17.55■□□□□ 0.4
RPAIN-205ENST00000536255 KIAA1551Q9HCM1 1747 aa17.55■□□□□ 0.4
RPAIN-205ENST00000536255 SERPINB2P05120 415 aa17.54■□□□□ 0.4
RPAIN-205ENST00000536255 ZNF652Q9Y2D9 606 aa17.54■□□□□ 0.4
RPAIN-205ENST00000536255 NRXN2Q9P2S2 1712 aa17.54■□□□□ 0.4
RPAIN-205ENST00000536255 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
RPAIN-205ENST00000536255 RGL2O15211 777 aa17.53■□□□□ 0.4
RPAIN-205ENST00000536255 MYL6BP14649 208 aa17.53■□□□□ 0.4
RPAIN-205ENST00000536255 KRT24Q2M2I5 525 aa17.53■□□□□ 0.4
RPAIN-205ENST00000536255 CLEC4GQ6UXB4 293 aa17.53■□□□□ 0.4
RPAIN-205ENST00000536255 A0A0G2JLW4 131 aa17.52■□□□□ 0.4
RPAIN-205ENST00000536255 GRIN3BO60391 1043 aa17.52■□□□□ 0.4
RPAIN-205ENST00000536255 HOXB7P09629 217 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms