RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 C1orf216Q8TAB5 229 aa10.64□□□□□ -0.71
VBP1-203ENST00000535916 ZCCHC2Q9C0B9 1178 aaKnown RBP10.64□□□□□ -0.71
VBP1-203ENST00000535916 UBTFP17480 764 aaKnown RBP10.63□□□□□ -0.71
VBP1-203ENST00000535916 ADAMTS19Q8TE59 1207 aa10.63□□□□□ -0.71
VBP1-203ENST00000535916 USP17L5A8MUK1 530 aa10.62□□□□□ -0.71
VBP1-203ENST00000535916 FOXK2Q01167 660 aa10.62□□□□□ -0.71
VBP1-203ENST00000535916 PSME1Q06323 249 aa10.62□□□□□ -0.71
VBP1-203ENST00000535916 FIGNL1Q6PIW4 674 aa10.62□□□□□ -0.71
VBP1-203ENST00000535916 GALNT6Q8NCL4 622 aa10.62□□□□□ -0.71
VBP1-203ENST00000535916 CABP1Q9NZU7 370 aa10.62□□□□□ -0.71
VBP1-203ENST00000535916 GDF2Q9UK05 429 aaPredicted RBP10.62□□□□□ -0.71
VBP1-203ENST00000535916 A0A1W2PNR3 127 aa10.61□□□□□ -0.71
VBP1-203ENST00000535916 LZTS3O60299 673 aaPredicted RBP10.61□□□□□ -0.71
VBP1-203ENST00000535916 SNRPNP63162 240 aaKnown RBP10.61□□□□□ -0.71
VBP1-203ENST00000535916 FLIIQ13045 1269 aa10.61□□□□□ -0.71
VBP1-203ENST00000535916 NBPF1Q3BBV0 1214 aa10.61□□□□□ -0.71
VBP1-203ENST00000535916 ARSJQ5FYB0 599 aaPredicted RBP10.61□□□□□ -0.71
VBP1-203ENST00000535916 NLRP8Q86W28 1048 aa10.61□□□□□ -0.71
VBP1-203ENST00000535916 GOLGA6L1Q8N7Z2 621 aa10.61□□□□□ -0.71
VBP1-203ENST00000535916 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
VBP1-203ENST00000535916 ZNF358Q9NW07 568 aa10.61□□□□□ -0.71
VBP1-203ENST00000535916 PCDHGC4Q9Y5F7 938 aa10.61□□□□□ -0.71
VBP1-203ENST00000535916 EDARADDQ8WWZ3 215 aa10.6□□□□□ -0.71
VBP1-203ENST00000535916 DCAF5Q96JK2 942 aa10.6□□□□□ -0.71
VBP1-203ENST00000535916 PSMG3-AS1Q96PY0 264 aa10.6□□□□□ -0.71
VBP1-203ENST00000535916 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
VBP1-203ENST00000535916 DCDC2BA2VCK2 349 aa10.59□□□□□ -0.71
VBP1-203ENST00000535916 BACH1O14867 736 aa10.59□□□□□ -0.71
VBP1-203ENST00000535916 ATXN7O15265 892 aaPredicted RBP10.59□□□□□ -0.71
VBP1-203ENST00000535916 ZDHHC3Q9NYG2 299 aa10.59□□□□□ -0.71
VBP1-203ENST00000535916 GGA1Q9UJY5 639 aa10.59□□□□□ -0.71
VBP1-203ENST00000535916 HCN2Q9UL51 889 aa10.59□□□□□ -0.71
VBP1-203ENST00000535916 TATP17735 454 aaPredicted RBP10.58□□□□□ -0.72
VBP1-203ENST00000535916 SLCO4C1Q6ZQN7 724 aa10.58□□□□□ -0.72
VBP1-203ENST00000535916 ZIC5Q96T25 663 aa10.58□□□□□ -0.72
VBP1-203ENST00000535916 SCHIP1Q9P0W5 487 aaPredicted RBP10.58□□□□□ -0.72
VBP1-203ENST00000535916 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.57□□□□□ -0.72
VBP1-203ENST00000535916 ZDHHC1Q8WTX9 485 aa10.57□□□□□ -0.72
VBP1-203ENST00000535916 UCN2Q96RP3 112 aa10.57□□□□□ -0.72
VBP1-203ENST00000535916 MAPTP10636 758 aaKnown RBP10.56□□□□□ -0.72
VBP1-203ENST00000535916 TXLNAP40222 546 aa10.56□□□□□ -0.72
VBP1-203ENST00000535916 EPHA4P54764 986 aa10.56□□□□□ -0.72
VBP1-203ENST00000535916 TNP2Q05952 138 aa10.56□□□□□ -0.72
VBP1-203ENST00000535916 PLA2G4EQ3MJ16 856 aa10.56□□□□□ -0.72
VBP1-203ENST00000535916 KRTAP9-2Q9BYQ4 174 aa10.56□□□□□ -0.72
VBP1-203ENST00000535916 RRAGCQ9HB90 399 aa10.56□□□□□ -0.72
VBP1-203ENST00000535916 KIAA1024Q9UPX6 916 aa10.56□□□□□ -0.72
VBP1-203ENST00000535916 KHNYNO15037 678 aaKnown RBP10.55□□□□□ -0.72
VBP1-203ENST00000535916 CD33P20138 364 aa10.55□□□□□ -0.72
VBP1-203ENST00000535916 TBCELQ5QJ74 424 aa10.55□□□□□ -0.72
VBP1-203ENST00000535916 HDGFL1Q5TGJ6 251 aa10.55□□□□□ -0.72
VBP1-203ENST00000535916 USP17L3A6NCW0 530 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 USP17L4A6NCW7 530 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 NEURL1BA8MQ27 555 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 ITGB2P05107 769 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 ARAFP10398 606 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 USP17L2Q6R6M4 530 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 SLC9A9Q8IVB4 645 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 PLEKHM2Q8IWE5 1019 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 TNS4Q8IZW8 715 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 MKL2Q9ULH7 1088 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 GJA3Q9Y6H8 435 aa10.54□□□□□ -0.72
VBP1-203ENST00000535916 EPXP11678 715 aa10.53□□□□□ -0.72
VBP1-203ENST00000535916 HOXB4P17483 251 aaPredicted RBP10.53□□□□□ -0.72
VBP1-203ENST00000535916 AMPD1P23109 780 aa10.53□□□□□ -0.72
VBP1-203ENST00000535916 CLDN10P78369 228 aa10.53□□□□□ -0.72
VBP1-203ENST00000535916 BICDL1Q6ZP65 573 aa10.53□□□□□ -0.72
VBP1-203ENST00000535916 TRIM50Q86XT4 487 aa10.53□□□□□ -0.72
VBP1-203ENST00000535916 TPCN2Q8NHX9 752 aa10.53□□□□□ -0.72
VBP1-203ENST00000535916 L3MBTL2Q969R5 705 aa10.53□□□□□ -0.72
VBP1-203ENST00000535916 ZBTB7BO15156 539 aaPredicted RBP10.52□□□□□ -0.73
VBP1-203ENST00000535916 ADAM23O75077 832 aa10.52□□□□□ -0.73
VBP1-203ENST00000535916 FAM157BP0CG42 384 aa10.52□□□□□ -0.73
VBP1-203ENST00000535916 TEAD4Q15561 434 aa10.52□□□□□ -0.73
VBP1-203ENST00000535916 KRTAP9-6A0A140TA67 174 aa10.51□□□□□ -0.73
VBP1-203ENST00000535916 ATP9BO43861 1147 aa10.51□□□□□ -0.73
VBP1-203ENST00000535916 NOS2P35228 1153 aa10.51□□□□□ -0.73
VBP1-203ENST00000535916 FAM182BQ5T319 152 aa10.51□□□□□ -0.73
VBP1-203ENST00000535916 CCDC102BQ68D86 513 aa10.51□□□□□ -0.73
VBP1-203ENST00000535916 KLF15Q9UIH9 416 aa10.51□□□□□ -0.73
VBP1-203ENST00000535916 ATP1A2P50993 1020 aa10.5□□□□□ -0.73
VBP1-203ENST00000535916 SH3PXD2AQ5TCZ1 1133 aa10.5□□□□□ -0.73
VBP1-203ENST00000535916 SAMD5Q5TGI4 173 aa10.5□□□□□ -0.73
VBP1-203ENST00000535916 CLUAP1Q96AJ1 413 aa10.5□□□□□ -0.73
VBP1-203ENST00000535916 BTBD6Q96KE9 485 aa10.5□□□□□ -0.73
VBP1-203ENST00000535916 STRN4Q9NRL3 753 aa10.5□□□□□ -0.73
VBP1-203ENST00000535916 ZNF232Q9UNY5 417 aa10.5□□□□□ -0.73
VBP1-203ENST00000535916 COL8A1P27658 744 aa10.49□□□□□ -0.73
VBP1-203ENST00000535916 LINC00114Q6XXX2 140 aa10.49□□□□□ -0.73
VBP1-203ENST00000535916 SPOCK3Q9BQ16 436 aa10.49□□□□□ -0.73
VBP1-203ENST00000535916 EML1O00423 815 aa10.48□□□□□ -0.73
VBP1-203ENST00000535916 MSTNO14793 375 aa10.48□□□□□ -0.73
VBP1-203ENST00000535916 EFSO43281 561 aa10.48□□□□□ -0.73
VBP1-203ENST00000535916 ADH6P28332 368 aa10.48□□□□□ -0.73
VBP1-203ENST00000535916 FCHSD1Q86WN1 690 aa10.48□□□□□ -0.73
VBP1-203ENST00000535916 OGFOD1Q8N543 542 aa10.48□□□□□ -0.73
VBP1-203ENST00000535916 MKRN1Q9UHC7 482 aaKnown RBP10.48□□□□□ -0.73
VBP1-203ENST00000535916 SERTM1A2A2V5 107 aa10.47□□□□□ -0.73
VBP1-203ENST00000535916 KRBA1A5PL33 1030 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms