RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 PTCD1O75127 700 aaKnown RBP14.04□□□□□ -0.16
UBE3B-205ENST00000535900 ADRA2BP18089 450 aa14.04□□□□□ -0.16
UBE3B-205ENST00000535900 NEUROD2Q15784 382 aa14.04□□□□□ -0.16
UBE3B-205ENST00000535900 AKAP4Q5JQC9 854 aa14.04□□□□□ -0.16
UBE3B-205ENST00000535900 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
UBE3B-205ENST00000535900 RTF1Q92541 710 aaKnown RBP14.04□□□□□ -0.16
UBE3B-205ENST00000535900 SLC4A9Q96Q91 983 aa14.04□□□□□ -0.16
UBE3B-205ENST00000535900 TRIM35Q9UPQ4 493 aa14.04□□□□□ -0.16
UBE3B-205ENST00000535900 C10orf71Q711Q0 1435 aa14.04□□□□□ -0.16
UBE3B-205ENST00000535900 N4BP2Q86UW6 1770 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-205ENST00000535900 RFC4P35249 363 aa14.03□□□□□ -0.16
UBE3B-205ENST00000535900 RRP7AQ9Y3A4 280 aaKnown RBP14.03□□□□□ -0.16
UBE3B-205ENST00000535900 PXDNLA1KZ92 1463 aa14.03□□□□□ -0.16
UBE3B-205ENST00000535900 DLG5Q8TDM6 1919 aa14.02□□□□□ -0.16
UBE3B-205ENST00000535900 ADCY9O60503 1353 aa14.02□□□□□ -0.17
UBE3B-205ENST00000535900 RC3H1Q5TC82 1133 aaKnown RBP14.02□□□□□ -0.17
UBE3B-205ENST00000535900 MYH16Q9H6N6 1097 aa14.02□□□□□ -0.17
UBE3B-205ENST00000535900 SALL2Q9Y467 1007 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-205ENST00000535900 MYH14Q7Z406 1995 aaKnown RBP14.02□□□□□ -0.17
UBE3B-205ENST00000535900 RPS6KA4O75676 772 aa14.01□□□□□ -0.17
UBE3B-205ENST00000535900 NLGN1Q8N2Q7 840 aa14.01□□□□□ -0.17
UBE3B-205ENST00000535900 ARHGEF1Q92888 912 aaKnown RBP14.01□□□□□ -0.17
UBE3B-205ENST00000535900 BABAM1Q9NWV8 329 aa14.01□□□□□ -0.17
UBE3B-205ENST00000535900 CRKLP46109 303 aaKnown RBP14□□□□□ -0.17
UBE3B-205ENST00000535900 GNAI1P63096 354 aa14□□□□□ -0.17
UBE3B-205ENST00000535900 SLFN5Q08AF3 891 aa14□□□□□ -0.17
UBE3B-205ENST00000535900 TRMT2AQ8IZ69 625 aaKnown RBP14□□□□□ -0.17
UBE3B-205ENST00000535900 NFATC2IPQ8NCF5 419 aa14□□□□□ -0.17
UBE3B-205ENST00000535900 GPBP1L1Q9HC44 474 aaPredicted RBP14□□□□□ -0.17
UBE3B-205ENST00000535900 CCDC87Q9NVE4 849 aa14□□□□□ -0.17
UBE3B-205ENST00000535900 ADAMTS7Q9UKP4 1686 aa14□□□□□ -0.17
UBE3B-205ENST00000535900 GYS1P13807 737 aa13.99□□□□□ -0.17
UBE3B-205ENST00000535900 ZNF526Q8TF50 670 aaPredicted RBP13.99□□□□□ -0.17
UBE3B-205ENST00000535900 IFT57Q9NWB7 429 aa13.99□□□□□ -0.17
UBE3B-205ENST00000535900 PARP3Q9Y6F1 533 aa13.99□□□□□ -0.17
UBE3B-205ENST00000535900 BRCA1P38398 1863 aaKnown RBP13.99□□□□□ -0.17
UBE3B-205ENST00000535900 CEMIPQ8WUJ3 1361 aa13.98□□□□□ -0.17
UBE3B-205ENST00000535900 CFAP44Q96MT7 982 aa13.98□□□□□ -0.17
UBE3B-205ENST00000535900 SLC52A2Q9HAB3 445 aa13.98□□□□□ -0.17
UBE3B-205ENST00000535900 KCPQ6ZWJ8 1503 aa13.98□□□□□ -0.17
UBE3B-205ENST00000535900 USP42Q9H9J4 1324 aaKnown RBP13.97□□□□□ -0.17
UBE3B-205ENST00000535900 UBR2Q8IWV8 1755 aa13.97□□□□□ -0.17
UBE3B-205ENST00000535900 CT47B1P0C2W7 299 aaPredicted RBP13.97□□□□□ -0.17
UBE3B-205ENST00000535900 TGFB2P61812 414 aa13.97□□□□□ -0.17
UBE3B-205ENST00000535900 SRP68Q9UHB9 627 aaKnown RBP13.97□□□□□ -0.17
UBE3B-205ENST00000535900 BCS1LQ9Y276 419 aa13.97□□□□□ -0.17
UBE3B-205ENST00000535900 RNMTO43148 476 aaKnown RBP13.96□□□□□ -0.17
UBE3B-205ENST00000535900 ZNF853P0CG23 659 aa13.96□□□□□ -0.17
UBE3B-205ENST00000535900 DUSP27Q5VZP5 1158 aa13.96□□□□□ -0.17
UBE3B-205ENST00000535900 ARFGEF1Q9Y6D6 1849 aa13.95□□□□□ -0.18
UBE3B-205ENST00000535900 DNAJC10Q8IXB1 793 aa13.95□□□□□ -0.18
UBE3B-205ENST00000535900 IL17REQ8NFR9 667 aa13.95□□□□□ -0.18
UBE3B-205ENST00000535900 COL15A1P39059 1388 aa13.95□□□□□ -0.18
UBE3B-205ENST00000535900 A0A0G2JLW4 131 aa13.94□□□□□ -0.18
UBE3B-205ENST00000535900 CHL1O00533 1208 aa13.94□□□□□ -0.18
UBE3B-205ENST00000535900 TEFQ10587 303 aa13.94□□□□□ -0.18
UBE3B-205ENST00000535900 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
UBE3B-205ENST00000535900 TAF7Q15545 349 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-205ENST00000535900 MCM10Q7L590 875 aa13.94□□□□□ -0.18
UBE3B-205ENST00000535900 CDCA7LQ96GN5 454 aa13.94□□□□□ -0.18
UBE3B-205ENST00000535900 LGR6Q9HBX8 967 aa13.94□□□□□ -0.18
UBE3B-205ENST00000535900 SOS1Q07889 1333 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-205ENST00000535900 ZPR1O75312 459 aa13.93□□□□□ -0.18
UBE3B-205ENST00000535900 DPEP1P16444 411 aa13.93□□□□□ -0.18
UBE3B-205ENST00000535900 FKBP8Q14318 412 aa13.93□□□□□ -0.18
UBE3B-205ENST00000535900 TTC5Q8N0Z6 440 aa13.93□□□□□ -0.18
UBE3B-205ENST00000535900 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
UBE3B-205ENST00000535900 SIPA1L3O60292 1781 aaPredicted RBP13.93□□□□□ -0.18
UBE3B-205ENST00000535900 SCN7AQ01118 1682 aa13.92□□□□□ -0.18
UBE3B-205ENST00000535900 DDR1Q08345 913 aa13.92□□□□□ -0.18
UBE3B-205ENST00000535900 DCTN1Q14203 1278 aa13.92□□□□□ -0.18
UBE3B-205ENST00000535900 INTS5Q6P9B9 1019 aaKnown RBP13.92□□□□□ -0.18
UBE3B-205ENST00000535900 CHMP4AQ9BY43 222 aa13.92□□□□□ -0.18
UBE3B-205ENST00000535900 FANCIQ9NVI1 1328 aa13.91□□□□□ -0.18
UBE3B-205ENST00000535900 USPL1Q5W0Q7 1092 aa13.91□□□□□ -0.18
UBE3B-205ENST00000535900 THUMPD2Q9BTF0 503 aaKnown RBP13.91□□□□□ -0.18
UBE3B-205ENST00000535900 SPINK5Q9NQ38 1064 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-205ENST00000535900 ZBTB1Q9Y2K1 713 aa13.91□□□□□ -0.18
UBE3B-205ENST00000535900 AFDNP55196 1824 aaKnown RBP13.91□□□□□ -0.18
UBE3B-205ENST00000535900 CYP19A1P11511 503 aaPredicted RBP13.9□□□□□ -0.18
UBE3B-205ENST00000535900 ARHGAP27Q6ZUM4 889 aa13.9□□□□□ -0.18
UBE3B-205ENST00000535900 MBIPQ9NS73 344 aa13.9□□□□□ -0.18
UBE3B-205ENST00000535900 NRXN2Q9P2S2 1712 aa13.9□□□□□ -0.18
UBE3B-205ENST00000535900 DLEC1Q9Y238 1755 aa13.89□□□□□ -0.19
UBE3B-205ENST00000535900 POLRMTO00411 1230 aaKnown RBP13.89□□□□□ -0.19
UBE3B-205ENST00000535900 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
UBE3B-205ENST00000535900 PIM2Q9P1W9 311 aa13.89□□□□□ -0.19
UBE3B-205ENST00000535900 TSPYL4Q9UJ04 414 aa13.89□□□□□ -0.19
UBE3B-205ENST00000535900 LAS1LQ9Y4W2 734 aaKnown RBP13.89□□□□□ -0.19
UBE3B-205ENST00000535900 CANXP27824 592 aaKnown RBP13.88□□□□□ -0.19
UBE3B-205ENST00000535900 DALRD3Q5D0E6 543 aaKnown RBP13.88□□□□□ -0.19
UBE3B-205ENST00000535900 BTBD11A6QL63 1104 aa13.87□□□□□ -0.19
UBE3B-205ENST00000535900 HOXB7P09629 217 aa13.87□□□□□ -0.19
UBE3B-205ENST00000535900 CHRNA5P30532 468 aa13.87□□□□□ -0.19
UBE3B-205ENST00000535900 NARFQ9UHQ1 456 aa13.87□□□□□ -0.19
UBE3B-205ENST00000535900 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
UBE3B-205ENST00000535900 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
UBE3B-205ENST00000535900 STARD3NLO95772 234 aa13.86□□□□□ -0.19
UBE3B-205ENST00000535900 TSR2Q969E8 191 aaKnown RBP13.86□□□□□ -0.19
UBE3B-205ENST00000535900 ZNF330Q9Y3S2 320 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms