RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 EIF4A1P60842 406 aaKnown RBP8.34□□□□□ -1.07
CDCA3-205ENST00000535871 EXOSC9Q06265 439 aaKnown RBP8.34□□□□□ -1.07
CDCA3-205ENST00000535871 DCTN1Q14203 1278 aa8.34□□□□□ -1.07
CDCA3-205ENST00000535871 TWISTNBQ3B726 338 aaPredicted RBP8.34□□□□□ -1.07
CDCA3-205ENST00000535871 ZNF790Q6PG37 636 aa8.34□□□□□ -1.07
CDCA3-205ENST00000535871 MPRIPQ6WCQ1 1025 aa8.34□□□□□ -1.07
CDCA3-205ENST00000535871 THUMPD2Q9BTF0 503 aaKnown RBP8.34□□□□□ -1.07
CDCA3-205ENST00000535871 LGR6Q9HBX8 967 aa8.34□□□□□ -1.07
CDCA3-205ENST00000535871 IBTKQ9P2D0 1353 aaPredicted RBP8.34□□□□□ -1.07
CDCA3-205ENST00000535871 RRP1P56182 461 aaKnown RBP8.33□□□□□ -1.08
CDCA3-205ENST00000535871 CABP4P57796 275 aa8.33□□□□□ -1.08
CDCA3-205ENST00000535871 CCDC30Q5VVM6 783 aa8.33□□□□□ -1.08
CDCA3-205ENST00000535871 TSR2Q969E8 191 aaKnown RBP8.33□□□□□ -1.08
CDCA3-205ENST00000535871 TEX13AQ9BXU3 409 aaPredicted RBP8.33□□□□□ -1.08
CDCA3-205ENST00000535871 PTPRCP08575 1304 aa8.32□□□□□ -1.08
CDCA3-205ENST00000535871 GLI3P10071 1580 aa8.32□□□□□ -1.08
CDCA3-205ENST00000535871 MNX1P50219 401 aaPredicted RBP8.32□□□□□ -1.08
CDCA3-205ENST00000535871 RBM6P78332 1123 aaKnown RBP8.32□□□□□ -1.08
CDCA3-205ENST00000535871 FMNL2Q96PY5 1086 aa8.32□□□□□ -1.08
CDCA3-205ENST00000535871 CHMP4BQ9H444 224 aaKnown RBP8.32□□□□□ -1.08
CDCA3-205ENST00000535871 SUPT16HQ9Y5B9 1047 aaKnown RBP8.32□□□□□ -1.08
CDCA3-205ENST00000535871 ZNF831Q5JPB2 1677 aa8.32□□□□□ -1.08
CDCA3-205ENST00000535871 UBR2Q8IWV8 1755 aa8.32□□□□□ -1.08
CDCA3-205ENST00000535871 PAPPAQ13219 1627 aa8.32□□□□□ -1.08
CDCA3-205ENST00000535871 CICQ96RK0 1608 aaPredicted RBP8.32□□□□□ -1.08
CDCA3-205ENST00000535871 GIGYF1O75420 1035 aaPredicted RBP8.31□□□□□ -1.08
CDCA3-205ENST00000535871 SNRPA1P09661 255 aaKnown RBP8.31□□□□□ -1.08
CDCA3-205ENST00000535871 TTC5Q8N0Z6 440 aa8.31□□□□□ -1.08
CDCA3-205ENST00000535871 C8orf58Q8NAV2 365 aa8.31□□□□□ -1.08
CDCA3-205ENST00000535871 NFATC2IPQ8NCF5 419 aa8.31□□□□□ -1.08
CDCA3-205ENST00000535871 DDX54Q8TDD1 881 aaKnown RBP8.31□□□□□ -1.08
CDCA3-205ENST00000535871 SMARCC1Q92922 1105 aaPredicted RBP8.31□□□□□ -1.08
CDCA3-205ENST00000535871 QTRT2Q9H974 415 aaKnown RBP8.31□□□□□ -1.08
CDCA3-205ENST00000535871 TMOD3Q9NYL9 352 aa8.31□□□□□ -1.08
CDCA3-205ENST00000535871 USP35Q9P2H5 1018 aa8.31□□□□□ -1.08
CDCA3-205ENST00000535871 CCDC9Q9Y3X0 531 aaKnown RBP8.31□□□□□ -1.08
CDCA3-205ENST00000535871 LAS1LQ9Y4W2 734 aaKnown RBP8.31□□□□□ -1.08
CDCA3-205ENST00000535871 FAM98CQ17RN3 349 aaKnown RBP8.3□□□□□ -1.08
CDCA3-205ENST00000535871 ZKSCAN2Q63HK3 967 aa8.3□□□□□ -1.08
CDCA3-205ENST00000535871 SSH1Q8WYL5 1049 aa8.3□□□□□ -1.08
CDCA3-205ENST00000535871 STK31Q9BXU1 1019 aa8.3□□□□□ -1.08
CDCA3-205ENST00000535871 SMC4Q9NTJ3 1288 aa8.3□□□□□ -1.08
CDCA3-205ENST00000535871 ATF7IPQ6VMQ6 1270 aa8.29□□□□□ -1.08
CDCA3-205ENST00000535871 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
CDCA3-205ENST00000535871 TSPYL6Q8N831 410 aa8.29□□□□□ -1.08
CDCA3-205ENST00000535871 MARCH10Q8NA82 808 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-205ENST00000535871 API5Q9BZZ5 524 aaKnown RBP8.29□□□□□ -1.08
CDCA3-205ENST00000535871 DBF4Q9UBU7 674 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-205ENST00000535871 ITGB4P16144 1822 aa8.29□□□□□ -1.08
CDCA3-205ENST00000535871 TOGARAM1Q9Y4F4 1720 aa8.29□□□□□ -1.08
CDCA3-205ENST00000535871 FAM196AQ6ZSG2 479 aa8.28□□□□□ -1.08
CDCA3-205ENST00000535871 PIGBQ92521 554 aa8.28□□□□□ -1.08
CDCA3-205ENST00000535871 DDX21Q9NR30 783 aaKnown RBP eCLIP8.28□□□□□ -1.08
CDCA3-205ENST00000535871 HYPKQ9NX55 129 aa8.28□□□□□ -1.08
CDCA3-205ENST00000535871 KCPQ6ZWJ8 1503 aa8.28□□□□□ -1.08
CDCA3-205ENST00000535871 PXDNLA1KZ92 1463 aa8.27□□□□□ -1.09
CDCA3-205ENST00000535871 SENP3-EIF4A1A0A087X0R7 540 aa8.27□□□□□ -1.09
CDCA3-205ENST00000535871 BCAR3O75815 825 aa8.27□□□□□ -1.09
CDCA3-205ENST00000535871 HDGFL1Q5TGJ6 251 aa8.27□□□□□ -1.09
CDCA3-205ENST00000535871 SEPT12Q8IYM1 358 aa8.27□□□□□ -1.09
CDCA3-205ENST00000535871 ZNF496Q96IT1 587 aaPredicted RBP8.27□□□□□ -1.09
CDCA3-205ENST00000535871 LAMB4A4D0S4 1761 aa8.27□□□□□ -1.09
CDCA3-205ENST00000535871 NHSQ6T4R5 1651 aa8.27□□□□□ -1.09
CDCA3-205ENST00000535871 ABCC4O15439 1325 aa8.27□□□□□ -1.09
CDCA3-205ENST00000535871 STARD3NLO95772 234 aa8.26□□□□□ -1.09
CDCA3-205ENST00000535871 RXRBP28702 533 aa8.26□□□□□ -1.09
CDCA3-205ENST00000535871 INTS3Q68E01 1043 aaKnown RBP8.26□□□□□ -1.09
CDCA3-205ENST00000535871 DZIP1LQ8IYY4 767 aaKnown RBP8.26□□□□□ -1.09
CDCA3-205ENST00000535871 ATG3Q9NT62 314 aa8.26□□□□□ -1.09
CDCA3-205ENST00000535871 MIS18AQ9NYP9 233 aa8.26□□□□□ -1.09
CDCA3-205ENST00000535871 RGS12O14924 1447 aa8.26□□□□□ -1.09
CDCA3-205ENST00000535871 DOT1LQ8TEK3 1739 aa8.26□□□□□ -1.09
CDCA3-205ENST00000535871 DDX58O95786 925 aaKnown RBP8.25□□□□□ -1.09
CDCA3-205ENST00000535871 TRIM27P14373 513 aa8.25□□□□□ -1.09
CDCA3-205ENST00000535871 CANXP27824 592 aaKnown RBP8.25□□□□□ -1.09
CDCA3-205ENST00000535871 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
CDCA3-205ENST00000535871 KRT27Q7Z3Y8 459 aa8.25□□□□□ -1.09
CDCA3-205ENST00000535871 ZNF467Q7Z7K2 595 aaPredicted RBP8.25□□□□□ -1.09
CDCA3-205ENST00000535871 FTSJ3Q8IY81 847 aaKnown RBP8.25□□□□□ -1.09
CDCA3-205ENST00000535871 ZC3H15Q8WU90 426 aaKnown RBP8.25□□□□□ -1.09
CDCA3-205ENST00000535871 AKT1S1Q96B36 256 aa8.25□□□□□ -1.09
CDCA3-205ENST00000535871 DDX19BQ9UMR2 479 aa8.25□□□□□ -1.09
CDCA3-205ENST00000535871 HDAC5Q9UQL6 1122 aa8.25□□□□□ -1.09
CDCA3-205ENST00000535871 ATP10DQ9P241 1426 aa8.24□□□□□ -1.09
CDCA3-205ENST00000535871 ELL2O00472 640 aaPredicted RBP8.24□□□□□ -1.09
CDCA3-205ENST00000535871 CCT4P50991 539 aaKnown RBP8.24□□□□□ -1.09
CDCA3-205ENST00000535871 FLIIQ13045 1269 aa8.24□□□□□ -1.09
CDCA3-205ENST00000535871 MVPQ14764 893 aaKnown RBP8.24□□□□□ -1.09
CDCA3-205ENST00000535871 ARHGEF1Q92888 912 aaKnown RBP8.24□□□□□ -1.09
CDCA3-205ENST00000535871 PPP4R2Q9NY27 417 aa8.24□□□□□ -1.09
CDCA3-205ENST00000535871 NOB1Q9ULX3 412 aaKnown RBP8.24□□□□□ -1.09
CDCA3-205ENST00000535871 N4BP2Q86UW6 1770 aaPredicted RBP8.24□□□□□ -1.09
CDCA3-205ENST00000535871 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
CDCA3-205ENST00000535871 KCNQ3O43525 872 aa8.23□□□□□ -1.09
CDCA3-205ENST00000535871 SLC39A6Q13433 755 aa8.23□□□□□ -1.09
CDCA3-205ENST00000535871 PDIA6Q15084 440 aa8.23□□□□□ -1.09
CDCA3-205ENST00000535871 KRT24Q2M2I5 525 aa8.23□□□□□ -1.09
CDCA3-205ENST00000535871 RC3H1Q5TC82 1133 aaKnown RBP8.23□□□□□ -1.09
CDCA3-205ENST00000535871 LRP10Q7Z4F1 713 aa8.23□□□□□ -1.09
CDCA3-205ENST00000535871 ASAP1Q9ULH1 1129 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms