RNA–Protein interactions for RNA: ENST00000535707.5

CD4-204, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-204ENST00000535707 UBR2Q8IWV8 1755 aa11.5□□□□□ -0.57
CD4-204ENST00000535707 CHL1O00533 1208 aa11.5□□□□□ -0.57
CD4-204ENST00000535707 PRIM1P49642 420 aaKnown RBP11.5□□□□□ -0.57
CD4-204ENST00000535707 GOLGA2Q08379 1002 aa11.5□□□□□ -0.57
CD4-204ENST00000535707 SMARCC1Q92922 1105 aaPredicted RBP11.5□□□□□ -0.57
CD4-204ENST00000535707 SOS1Q07889 1333 aaPredicted RBP11.5□□□□□ -0.57
CD4-204ENST00000535707 TESPA1A2RU30 521 aaPredicted RBP11.49□□□□□ -0.57
CD4-204ENST00000535707 E9PSI1 815 aa11.49□□□□□ -0.57
CD4-204ENST00000535707 SEMA3EO15041 775 aa11.49□□□□□ -0.57
CD4-204ENST00000535707 E2F4Q16254 413 aa11.49□□□□□ -0.57
CD4-204ENST00000535707 NFATC2IPQ8NCF5 419 aa11.49□□□□□ -0.57
CD4-204ENST00000535707 MYH16Q9H6N6 1097 aa11.49□□□□□ -0.57
CD4-204ENST00000535707 TNS1Q9HBL0 1735 aaKnown RBP11.49□□□□□ -0.57
CD4-204ENST00000535707 BTAF1O14981 1849 aa11.49□□□□□ -0.57
CD4-204ENST00000535707 BTBD11A6QL63 1104 aa11.48□□□□□ -0.57
CD4-204ENST00000535707 PLSCR1O15162 318 aa11.48□□□□□ -0.57
CD4-204ENST00000535707 DCTN1Q14203 1278 aa11.48□□□□□ -0.57
CD4-204ENST00000535707 TRMT2AQ8IZ69 625 aaKnown RBP11.48□□□□□ -0.57
CD4-204ENST00000535707 PIGBQ92521 554 aa11.48□□□□□ -0.57
CD4-204ENST00000535707 CHMP4AQ9BY43 222 aa11.48□□□□□ -0.57
CD4-204ENST00000535707 LY75O60449 1722 aa11.47□□□□□ -0.57
CD4-204ENST00000535707 HEG1Q9ULI3 1381 aa11.47□□□□□ -0.57
CD4-204ENST00000535707 ZNF790Q6PG37 636 aa11.47□□□□□ -0.57
CD4-204ENST00000535707 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
CD4-204ENST00000535707 PODXL2Q9NZ53 605 aa11.47□□□□□ -0.57
CD4-204ENST00000535707 KCPQ6ZWJ8 1503 aa11.46□□□□□ -0.57
CD4-204ENST00000535707 KCNQ2O43526 872 aa11.46□□□□□ -0.57
CD4-204ENST00000535707 HOXB7P09629 217 aa11.46□□□□□ -0.57
CD4-204ENST00000535707 SLFN5Q08AF3 891 aa11.46□□□□□ -0.57
CD4-204ENST00000535707 TTC5Q8N0Z6 440 aa11.46□□□□□ -0.57
CD4-204ENST00000535707 SYTL4Q96C24 671 aaPredicted RBP11.46□□□□□ -0.57
CD4-204ENST00000535707 THUMPD2Q9BTF0 503 aaKnown RBP11.46□□□□□ -0.57
CD4-204ENST00000535707 ATG3Q9NT62 314 aa11.46□□□□□ -0.57
CD4-204ENST00000535707 TSPYL4Q9UJ04 414 aa11.46□□□□□ -0.57
CD4-204ENST00000535707 CT47B1P0C2W7 299 aaPredicted RBP11.45□□□□□ -0.58
CD4-204ENST00000535707 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
CD4-204ENST00000535707 FAM182BQ5T319 152 aa11.45□□□□□ -0.58
CD4-204ENST00000535707 ACSBG1Q96GR2 724 aa11.45□□□□□ -0.58
CD4-204ENST00000535707 FMNL2Q96PY5 1086 aa11.45□□□□□ -0.58
CD4-204ENST00000535707 TEX13AQ9BXU3 409 aaPredicted RBP11.45□□□□□ -0.58
CD4-204ENST00000535707 PALLDQ8WX93 1383 aa11.44□□□□□ -0.58
CD4-204ENST00000535707 FANCIQ9NVI1 1328 aa11.44□□□□□ -0.58
CD4-204ENST00000535707 ZMYND10O75800 440 aa11.44□□□□□ -0.58
CD4-204ENST00000535707 TRIM37O94972 964 aa11.44□□□□□ -0.58
CD4-204ENST00000535707 SLC27A3Q5K4L6 730 aa11.44□□□□□ -0.58
CD4-204ENST00000535707 ZNF428Q96B54 188 aa11.44□□□□□ -0.58
CD4-204ENST00000535707 MFRPQ9BY79 579 aa11.44□□□□□ -0.58
CD4-204ENST00000535707 MBIPQ9NS73 344 aa11.44□□□□□ -0.58
CD4-204ENST00000535707 SALL2Q9Y467 1007 aaPredicted RBP11.44□□□□□ -0.58
CD4-204ENST00000535707 EIF4A1P60842 406 aaKnown RBP11.43□□□□□ -0.58
CD4-204ENST00000535707 SF3B2Q13435 895 aaKnown RBP11.43□□□□□ -0.58
CD4-204ENST00000535707 ASAP1Q9ULH1 1129 aa11.43□□□□□ -0.58
CD4-204ENST00000535707 LAMB4A4D0S4 1761 aa11.43□□□□□ -0.58
CD4-204ENST00000535707 C5P01031 1676 aa11.43□□□□□ -0.58
CD4-204ENST00000535707 SNRPA1P09661 255 aaKnown RBP11.42□□□□□ -0.58
CD4-204ENST00000535707 DUSP27Q5VZP5 1158 aa11.42□□□□□ -0.58
CD4-204ENST00000535707 ERBB4Q15303 1308 aa11.41□□□□□ -0.58
CD4-204ENST00000535707 COL5A3P25940 1745 aaPredicted RBP11.41□□□□□ -0.58
CD4-204ENST00000535707 TJP1Q07157 1748 aa11.41□□□□□ -0.58
CD4-204ENST00000535707 LOC102724428A0A0B4J2F2 783 aa11.41□□□□□ -0.58
CD4-204ENST00000535707 GIGYF1O75420 1035 aaPredicted RBP11.41□□□□□ -0.58
CD4-204ENST00000535707 APBA3O96018 575 aa11.41□□□□□ -0.58
CD4-204ENST00000535707 BAG6P46379 1132 aa11.41□□□□□ -0.58
CD4-204ENST00000535707 SIK1P57059 783 aa11.41□□□□□ -0.58
CD4-204ENST00000535707 SMYD5Q6GMV2 418 aa11.41□□□□□ -0.58
CD4-204ENST00000535707 ZNF496Q96IT1 587 aaPredicted RBP11.41□□□□□ -0.58
CD4-204ENST00000535707 LAS1LQ9Y4W2 734 aaKnown RBP11.41□□□□□ -0.58
CD4-204ENST00000535707 RREB1Q92766 1687 aa11.4□□□□□ -0.58
CD4-204ENST00000535707 SLC39A6Q13433 755 aa11.4□□□□□ -0.58
CD4-204ENST00000535707 PTF1AQ7RTS3 328 aa11.4□□□□□ -0.58
CD4-204ENST00000535707 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
CD4-204ENST00000535707 EP400Q96L91 3159 aa11.39□□□□□ -0.59
CD4-204ENST00000535707 UPF1Q92900 1129 aaKnown RBP eCLIP11.39□□□□□ -0.59
CD4-204ENST00000535707 TSR2Q969E8 191 aaKnown RBP11.39□□□□□ -0.59
CD4-204ENST00000535707 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
CD4-204ENST00000535707 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
CD4-204ENST00000535707 TAF1LQ8IZX4 1826 aa11.38□□□□□ -0.59
CD4-204ENST00000535707 KCNQ3O43525 872 aa11.38□□□□□ -0.59
CD4-204ENST00000535707 PPP1R37O75864 691 aa11.38□□□□□ -0.59
CD4-204ENST00000535707 STARD3NLO95772 234 aa11.38□□□□□ -0.59
CD4-204ENST00000535707 EXOSC9Q06265 439 aaKnown RBP11.38□□□□□ -0.59
CD4-204ENST00000535707 TXNRD1Q16881 649 aa11.38□□□□□ -0.59
CD4-204ENST00000535707 TWISTNBQ3B726 338 aaPredicted RBP11.38□□□□□ -0.59
CD4-204ENST00000535707 RC3H1Q5TC82 1133 aaKnown RBP11.38□□□□□ -0.59
CD4-204ENST00000535707 CAMKK2Q96RR4 588 aa11.38□□□□□ -0.59
CD4-204ENST00000535707 CCNL1Q9UK58 526 aaPredicted RBP11.38□□□□□ -0.59
CD4-204ENST00000535707 CNTNAP4Q9C0A0 1308 aa11.37□□□□□ -0.59
CD4-204ENST00000535707 SENP3-EIF4A1A0A087X0R7 540 aa11.37□□□□□ -0.59
CD4-204ENST00000535707 PTCD1O75127 700 aaKnown RBP11.37□□□□□ -0.59
CD4-204ENST00000535707 ATP6V1AP38606 617 aa11.37□□□□□ -0.59
CD4-204ENST00000535707 ILDR2Q71H61 639 aa11.37□□□□□ -0.59
CD4-204ENST00000535707 C8orf58Q8NAV2 365 aa11.37□□□□□ -0.59
CD4-204ENST00000535707 YTHDC1Q96MU7 727 aaKnown RBP11.37□□□□□ -0.59
CD4-204ENST00000535707 SLC4A9Q96Q91 983 aa11.37□□□□□ -0.59
CD4-204ENST00000535707 RBM42Q9BTD8 480 aaKnown RBP11.37□□□□□ -0.59
CD4-204ENST00000535707 PCDHB8Q9UN66 801 aa11.37□□□□□ -0.59
CD4-204ENST00000535707 PCDHB13Q9Y5F0 798 aa11.37□□□□□ -0.59
CD4-204ENST00000535707 C4BP0C0L5 1744 aa11.36□□□□□ -0.59
CD4-204ENST00000535707 VAMP4O75379 141 aa11.36□□□□□ -0.59
CD4-204ENST00000535707 CYP19A1P11511 503 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms