RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 DKK1O94907 266 aa5.63□□□□□ -1.51
SNHG1-202ENST00000535689 ERCC3P19447 782 aa5.63□□□□□ -1.51
SNHG1-202ENST00000535689 CBLBQ13191 982 aa5.63□□□□□ -1.51
SNHG1-202ENST00000535689 TEAD4Q15561 434 aa5.63□□□□□ -1.51
SNHG1-202ENST00000535689 LYSMD3Q7Z3D4 306 aa5.63□□□□□ -1.51
SNHG1-202ENST00000535689 ABTB2Q8N961 1025 aa5.63□□□□□ -1.51
SNHG1-202ENST00000535689 ZFAND3Q9H8U3 227 aa5.63□□□□□ -1.51
SNHG1-202ENST00000535689 ZNF232Q9UNY5 417 aa5.63□□□□□ -1.51
SNHG1-202ENST00000535689 ITGAEP38570 1179 aa5.62□□□□□ -1.51
SNHG1-202ENST00000535689 FAM69CQ0P6D2 419 aa5.62□□□□□ -1.51
SNHG1-202ENST00000535689 C1orf53Q5VUE5 145 aa5.62□□□□□ -1.51
SNHG1-202ENST00000535689 TAS1R3Q7RTX0 852 aa5.62□□□□□ -1.51
SNHG1-202ENST00000535689 SLC9A9Q8IVB4 645 aa5.62□□□□□ -1.51
SNHG1-202ENST00000535689 TTC16Q8NEE8 873 aa5.62□□□□□ -1.51
SNHG1-202ENST00000535689 CHMP7Q8WUX9 453 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-202ENST00000535689 ATP13A2Q9NQ11 1180 aa5.62□□□□□ -1.51
SNHG1-202ENST00000535689 TTLL8A6PVC2 850 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 SPATA31C2B4DYI2 1134 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 FAM13AO94988 1023 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 IL2RAP01589 272 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 RPLP1P05386 114 aaKnown RBP5.61□□□□□ -1.51
SNHG1-202ENST00000535689 PCSK2P16519 638 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 NOS2P35228 1153 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 HIRAP54198 1017 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-202ENST00000535689 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.61□□□□□ -1.51
SNHG1-202ENST00000535689 TMCO4Q5TGY1 634 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 TRIM46Q7Z4K8 759 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 TNS4Q8IZW8 715 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 ZNF395Q9H8N7 513 aaPredicted RBP5.61□□□□□ -1.51
SNHG1-202ENST00000535689 RAB6BQ9NRW1 208 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 ZDHHC3Q9NYG2 299 aa5.61□□□□□ -1.51
SNHG1-202ENST00000535689 A0A1B0GTH6 734 aa5.6□□□□□ -1.51
SNHG1-202ENST00000535689 SNRPBP14678 240 aaKnown RBP5.6□□□□□ -1.51
SNHG1-202ENST00000535689 BRD2P25440 801 aaKnown RBP5.6□□□□□ -1.51
SNHG1-202ENST00000535689 FGD1P98174 961 aa5.6□□□□□ -1.51
SNHG1-202ENST00000535689 C16orf46Q6P387 395 aa5.6□□□□□ -1.51
SNHG1-202ENST00000535689 TXNDC2Q86VQ3 553 aa5.6□□□□□ -1.51
SNHG1-202ENST00000535689 PGBD3Q8N328 593 aa5.6□□□□□ -1.51
SNHG1-202ENST00000535689 GMCL1Q96IK5 515 aa5.6□□□□□ -1.51
SNHG1-202ENST00000535689 PRIMPOLQ96LW4 560 aa5.6□□□□□ -1.51
SNHG1-202ENST00000535689 C2orf49Q9BVC5 232 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-202ENST00000535689 GRIP2Q9C0E4 1043 aa5.6□□□□□ -1.51
SNHG1-202ENST00000535689 TSPAN10Q9H1Z9 355 aaPredicted RBP5.6□□□□□ -1.51
SNHG1-202ENST00000535689 GJA3Q9Y6H8 435 aa5.6□□□□□ -1.51
SNHG1-202ENST00000535689 IVNS1ABPQ9Y6Y0 642 aa5.6□□□□□ -1.51
SNHG1-202ENST00000535689 H7C1W4 665 aa5.59□□□□□ -1.51
SNHG1-202ENST00000535689 EPHA4P54764 986 aa5.59□□□□□ -1.51
SNHG1-202ENST00000535689 FOXK2Q01167 660 aa5.59□□□□□ -1.51
SNHG1-202ENST00000535689 FKBP4Q02790 459 aaKnown RBP eCLIP5.59□□□□□ -1.51
SNHG1-202ENST00000535689 LBRQ14739 615 aaKnown RBP5.59□□□□□ -1.51
SNHG1-202ENST00000535689 OCLNQ16625 522 aa5.59□□□□□ -1.51
SNHG1-202ENST00000535689 C6orf118Q5T5N4 469 aa5.59□□□□□ -1.51
SNHG1-202ENST00000535689 GLYCTKQ8IVS8 523 aa5.59□□□□□ -1.51
SNHG1-202ENST00000535689 L3MBTL2Q969R5 705 aa5.59□□□□□ -1.51
SNHG1-202ENST00000535689 ZNF775Q96BV0 537 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-202ENST00000535689 AGBL1Q96MI9 1066 aa5.59□□□□□ -1.51
SNHG1-202ENST00000535689 HRH3Q9Y5N1 445 aa5.59□□□□□ -1.51
SNHG1-202ENST00000535689 PDS5BQ9NTI5 1447 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 C11orf95C9JLR9 678 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-202ENST00000535689 MAN1A2O60476 641 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 ABL1P00519 1130 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 NEFLP07196 543 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 EPB42P16452 691 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 RTN1Q16799 776 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 CCDC27Q2M243 656 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 C11orf91Q3C1V1 193 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 SND1Q7KZF4 910 aaKnown RBP eCLIP5.58□□□□□ -1.52
SNHG1-202ENST00000535689 AIDAQ96BJ3 306 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 MYO19Q96H55 970 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 INSM2Q96T92 566 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-202ENST00000535689 FHDC1Q9C0D6 1143 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-202ENST00000535689 GZF1Q9H116 711 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-202ENST00000535689 TIMMDC1Q9NPL8 285 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 PODXL2Q9NZ53 605 aa5.58□□□□□ -1.52
SNHG1-202ENST00000535689 C21orf2O43822 256 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 USP5P45974 858 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 AAMPQ13685 434 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 EFHC2Q5JST6 749 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 NBPF10Q6P3W6 841 aaKnown RBP5.57□□□□□ -1.52
SNHG1-202ENST00000535689 FIGNL1Q6PIW4 674 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 BICDL1Q6ZP65 573 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 ZSCAN29Q8IWY8 852 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-202ENST00000535689 HELQQ8TDG4 1101 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 CITED4Q96RK1 184 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 C11orf16Q9NQ32 467 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 BIN2Q9UBW5 565 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-202ENST00000535689 SMARCA2P51531 1590 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 LAMC3Q9Y6N6 1575 aa5.57□□□□□ -1.52
SNHG1-202ENST00000535689 SOBPA7XYQ1 873 aa5.56□□□□□ -1.52
SNHG1-202ENST00000535689 TRIM26Q12899 539 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-202ENST00000535689 PDE3BQ13370 1112 aa5.56□□□□□ -1.52
SNHG1-202ENST00000535689 FKBP5Q13451 457 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-202ENST00000535689 FOXR1Q6PIV2 292 aa5.56□□□□□ -1.52
SNHG1-202ENST00000535689 POTEAQ6S8J7 498 aa5.56□□□□□ -1.52
SNHG1-202ENST00000535689 RHPN1Q8TCX5 695 aa5.56□□□□□ -1.52
SNHG1-202ENST00000535689 PURBQ96QR8 312 aaKnown RBP5.56□□□□□ -1.52
SNHG1-202ENST00000535689 STIM2Q9P246 746 aa5.56□□□□□ -1.52
SNHG1-202ENST00000535689 IQSEC3Q9UPP2 1182 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-202ENST00000535689 DYRK1BQ9Y463 629 aa5.56□□□□□ -1.52
SNHG1-202ENST00000535689 SOS2Q07890 1332 aaPredicted RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms