RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 THUMPD2Q9BTF0 503 aaKnown RBP18.91■□□□□ 0.62
MSRB3-206ENST00000535664 FHDC1Q9C0D6 1143 aaPredicted RBP18.91■□□□□ 0.62
MSRB3-206ENST00000535664 CICQ96RK0 1608 aaPredicted RBP18.9■□□□□ 0.62
MSRB3-206ENST00000535664 CRKLP46109 303 aaKnown RBP18.9■□□□□ 0.62
MSRB3-206ENST00000535664 SLC39A6Q13433 755 aa18.9■□□□□ 0.62
MSRB3-206ENST00000535664 DUSP27Q5VZP5 1158 aa18.9■□□□□ 0.62
MSRB3-206ENST00000535664 FMNL2Q96PY5 1086 aa18.9■□□□□ 0.62
MSRB3-206ENST00000535664 COL24A1Q17RW2 1714 aa18.9■□□□□ 0.62
MSRB3-206ENST00000535664 TUBGCP6Q96RT7 1819 aa18.89■□□□□ 0.61
MSRB3-206ENST00000535664 E9PSI1 815 aa18.89■□□□□ 0.61
MSRB3-206ENST00000535664 DCTN1Q14203 1278 aa18.89■□□□□ 0.61
MSRB3-206ENST00000535664 CCDC87Q9NVE4 849 aa18.89■□□□□ 0.61
MSRB3-206ENST00000535664 UBR3Q6ZT12 1888 aa18.88■□□□□ 0.61
MSRB3-206ENST00000535664 TAF7Q15545 349 aaPredicted RBP18.88■□□□□ 0.61
MSRB3-206ENST00000535664 MCM10Q7L590 875 aa18.88■□□□□ 0.61
MSRB3-206ENST00000535664 DNAJC10Q8IXB1 793 aa18.88■□□□□ 0.61
MSRB3-206ENST00000535664 ARHGEF1Q92888 912 aaKnown RBP18.88■□□□□ 0.61
MSRB3-206ENST00000535664 VIRMAQ69YN4 1812 aaKnown RBP18.88■□□□□ 0.61
MSRB3-206ENST00000535664 ZNF853P0CG23 659 aa18.87■□□□□ 0.61
MSRB3-206ENST00000535664 CYP19A1P11511 503 aaPredicted RBP18.87■□□□□ 0.61
MSRB3-206ENST00000535664 CD2APQ9Y5K6 639 aa18.87■□□□□ 0.61
MSRB3-206ENST00000535664 COL5A3P25940 1745 aaPredicted RBP18.86■□□□□ 0.61
MSRB3-206ENST00000535664 HEG1Q9ULI3 1381 aa18.86■□□□□ 0.61
MSRB3-206ENST00000535664 INTS5Q6P9B9 1019 aaKnown RBP18.86■□□□□ 0.61
MSRB3-206ENST00000535664 SIPA1L3O60292 1781 aaPredicted RBP18.86■□□□□ 0.61
MSRB3-206ENST00000535664 KCPQ6ZWJ8 1503 aa18.85■□□□□ 0.61
MSRB3-206ENST00000535664 CALD1Q05682 793 aaKnown RBP18.85■□□□□ 0.61
MSRB3-206ENST00000535664 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
MSRB3-206ENST00000535664 AMIGO3Q86WK7 504 aa18.85■□□□□ 0.61
MSRB3-206ENST00000535664 ZNF496Q96IT1 587 aaPredicted RBP18.85■□□□□ 0.61
MSRB3-206ENST00000535664 IFT57Q9NWB7 429 aa18.85■□□□□ 0.61
MSRB3-206ENST00000535664 FANCIQ9NVI1 1328 aa18.84■□□□□ 0.61
MSRB3-206ENST00000535664 A0A087WZG4 1122 aa18.84■□□□□ 0.61
MSRB3-206ENST00000535664 MSL1Q68DK7 614 aa18.84■□□□□ 0.61
MSRB3-206ENST00000535664 ZPR1O75312 459 aa18.83■□□□□ 0.6
MSRB3-206ENST00000535664 SNRPA1P09661 255 aaKnown RBP18.83■□□□□ 0.6
MSRB3-206ENST00000535664 MYH16Q9H6N6 1097 aa18.83■□□□□ 0.6
MSRB3-206ENST00000535664 BABAM1Q9NWV8 329 aa18.83■□□□□ 0.6
MSRB3-206ENST00000535664 GNAI1P63096 354 aa18.82■□□□□ 0.6
MSRB3-206ENST00000535664 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
MSRB3-206ENST00000535664 KDM3BQ7LBC6 1761 aa18.81■□□□□ 0.6
MSRB3-206ENST00000535664 UBR2Q8IWV8 1755 aa18.81■□□□□ 0.6
MSRB3-206ENST00000535664 SOS1Q07889 1333 aaPredicted RBP18.81■□□□□ 0.6
MSRB3-206ENST00000535664 TJP1Q07157 1748 aa18.81■□□□□ 0.6
MSRB3-206ENST00000535664 CHL1O00533 1208 aa18.81■□□□□ 0.6
MSRB3-206ENST00000535664 GYS1P13807 737 aa18.81■□□□□ 0.6
MSRB3-206ENST00000535664 KLHL34Q8N239 644 aa18.81■□□□□ 0.6
MSRB3-206ENST00000535664 TSR2Q969E8 191 aaKnown RBP18.81■□□□□ 0.6
MSRB3-206ENST00000535664 USP42Q9H9J4 1324 aaKnown RBP18.8■□□□□ 0.6
MSRB3-206ENST00000535664 IL6STP40189 918 aaPredicted RBP18.8■□□□□ 0.6
MSRB3-206ENST00000535664 PARP3Q9Y6F1 533 aa18.8■□□□□ 0.6
MSRB3-206ENST00000535664 MMP10P09238 476 aa18.79■□□□□ 0.6
MSRB3-206ENST00000535664 SMIM5Q71RC9 77 aa18.79■□□□□ 0.6
MSRB3-206ENST00000535664 MBIPQ9NS73 344 aa18.79■□□□□ 0.6
MSRB3-206ENST00000535664 NARFQ9UHQ1 456 aa18.79■□□□□ 0.6
MSRB3-206ENST00000535664 EIF5P55010 431 aaKnown RBP18.78■□□□□ 0.6
MSRB3-206ENST00000535664 ZBTB1Q9Y2K1 713 aa18.78■□□□□ 0.6
MSRB3-206ENST00000535664 CANXP27824 592 aaKnown RBP18.77■□□□□ 0.6
MSRB3-206ENST00000535664 COL15A1P39059 1388 aa18.77■□□□□ 0.6
MSRB3-206ENST00000535664 MYH14Q7Z406 1995 aaKnown RBP18.77■□□□□ 0.59
MSRB3-206ENST00000535664 GPR162Q16538 588 aa18.76■□□□□ 0.59
MSRB3-206ENST00000535664 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
MSRB3-206ENST00000535664 RGL2O15211 777 aa18.75■□□□□ 0.59
MSRB3-206ENST00000535664 KCNQ3O43525 872 aa18.75■□□□□ 0.59
MSRB3-206ENST00000535664 GRIN3BO60391 1043 aa18.75■□□□□ 0.59
MSRB3-206ENST00000535664 TGFB2P61812 414 aa18.75■□□□□ 0.59
MSRB3-206ENST00000535664 EXOSC9Q06265 439 aaKnown RBP18.75■□□□□ 0.59
MSRB3-206ENST00000535664 USPL1Q5W0Q7 1092 aa18.74■□□□□ 0.59
MSRB3-206ENST00000535664 TM4SF1P30408 202 aa18.73■□□□□ 0.59
MSRB3-206ENST00000535664 MIS18AQ9NYP9 233 aa18.73■□□□□ 0.59
MSRB3-206ENST00000535664 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
MSRB3-206ENST00000535664 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
MSRB3-206ENST00000535664 A1BGP04217 495 aa18.72■□□□□ 0.59
MSRB3-206ENST00000535664 EIF4A1P60842 406 aaKnown RBP18.72■□□□□ 0.59
MSRB3-206ENST00000535664 FKBP8Q14318 412 aa18.72■□□□□ 0.59
MSRB3-206ENST00000535664 SRP68Q9UHB9 627 aaKnown RBP18.72■□□□□ 0.59
MSRB3-206ENST00000535664 RNF123Q5XPI4 1314 aa18.72■□□□□ 0.59
MSRB3-206ENST00000535664 GIGYF1O75420 1035 aaPredicted RBP18.71■□□□□ 0.59
MSRB3-206ENST00000535664 CT47B1P0C2W7 299 aaPredicted RBP18.71■□□□□ 0.59
MSRB3-206ENST00000535664 NLGN2Q8NFZ4 835 aa18.71■□□□□ 0.59
MSRB3-206ENST00000535664 RCAN3Q9UKA8 241 aa18.71■□□□□ 0.59
MSRB3-206ENST00000535664 C4AP0C0L4 1744 aa18.7■□□□□ 0.58
MSRB3-206ENST00000535664 C8orf58Q8NAV2 365 aa18.7■□□□□ 0.58
MSRB3-206ENST00000535664 ZNF652Q9Y2D9 606 aa18.7■□□□□ 0.58
MSRB3-206ENST00000535664 ERBB4Q15303 1308 aa18.7■□□□□ 0.58
MSRB3-206ENST00000535664 CLEC4GQ6UXB4 293 aa18.69■□□□□ 0.58
MSRB3-206ENST00000535664 TSPYL6Q8N831 410 aa18.69■□□□□ 0.58
MSRB3-206ENST00000535664 KRT24Q2M2I5 525 aa18.68■□□□□ 0.58
MSRB3-206ENST00000535664 ZNF330Q9Y3S2 320 aaPredicted RBP18.68■□□□□ 0.58
MSRB3-206ENST00000535664 POLRMTO00411 1230 aaKnown RBP18.67■□□□□ 0.58
MSRB3-206ENST00000535664 VAMP4O75379 141 aa18.67■□□□□ 0.58
MSRB3-206ENST00000535664 YY1P25490 414 aa18.67■□□□□ 0.58
MSRB3-206ENST00000535664 NFIXQ14938 502 aa18.67■□□□□ 0.58
MSRB3-206ENST00000535664 DZIP3Q86Y13 1208 aaKnown RBP18.67■□□□□ 0.58
MSRB3-206ENST00000535664 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
MSRB3-206ENST00000535664 CHMP4AQ9BY43 222 aa18.67■□□□□ 0.58
MSRB3-206ENST00000535664 PDZRN3Q9UPQ7 1066 aa18.67■□□□□ 0.58
MSRB3-206ENST00000535664 C10orf71Q711Q0 1435 aa18.66■□□□□ 0.58
MSRB3-206ENST00000535664 RARSP54136 660 aaKnown RBP18.66■□□□□ 0.58
MSRB3-206ENST00000535664 SETDB2Q96T68 719 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms