RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 MYRIPQ8NFW9 859 aa16.13■□□□□ 0.17
HDAC4-214ENST00000535493 PIBF1Q8WXW3 757 aa16.13■□□□□ 0.17
HDAC4-214ENST00000535493 CASTP20810 708 aaKnown RBP16.13■□□□□ 0.17
HDAC4-214ENST00000535493 EYA1Q99502 592 aa16.13■□□□□ 0.17
HDAC4-214ENST00000535493 CAMK4Q16566 473 aa16.12■□□□□ 0.17
HDAC4-214ENST00000535493 ADCK5Q3MIX3 580 aa16.12■□□□□ 0.17
HDAC4-214ENST00000535493 FERMT3Q86UX7 667 aa16.12■□□□□ 0.17
HDAC4-214ENST00000535493 NECAB1Q8N987 351 aa16.12■□□□□ 0.17
HDAC4-214ENST00000535493 PYCARDQ9ULZ3 195 aa16.12■□□□□ 0.17
HDAC4-214ENST00000535493 VPS37CA5D8V6 355 aaPredicted RBP16.12■□□□□ 0.17
HDAC4-214ENST00000535493 SRGAP3O43295 1099 aa16.12■□□□□ 0.17
HDAC4-214ENST00000535493 NBPF7P0C2Y1 421 aaPredicted RBP16.12■□□□□ 0.17
HDAC4-214ENST00000535493 SMC3Q9UQE7 1217 aa16.12■□□□□ 0.17
HDAC4-214ENST00000535493 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
HDAC4-214ENST00000535493 AMPHP49418 695 aa16.11■□□□□ 0.17
HDAC4-214ENST00000535493 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
HDAC4-214ENST00000535493 TCEANC2Q96MN5 208 aa16.11■□□□□ 0.17
HDAC4-214ENST00000535493 STAP2Q9UGK3 403 aa16.11■□□□□ 0.17
HDAC4-214ENST00000535493 RIMS1Q86UR5 1692 aaKnown RBP16.11■□□□□ 0.17
HDAC4-214ENST00000535493 A2ML1A8K2U0 1454 aa16.11■□□□□ 0.17
HDAC4-214ENST00000535493 SOS1Q07889 1333 aaPredicted RBP16.1■□□□□ 0.17
HDAC4-214ENST00000535493 KDM4AO75164 1064 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 CCDC30Q5VVM6 783 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 PI4K2BQ8TCG2 481 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.1■□□□□ 0.17
HDAC4-214ENST00000535493 SGSM2O43147 1006 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 GJB2P29033 226 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 RHPN1Q8TCX5 695 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 IGSF3O75054 1194 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 F13A1P00488 732 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 PTH1RQ03431 593 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 TTC14Q96N46 770 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 KCNF1Q9H3M0 494 aa16.1■□□□□ 0.17
HDAC4-214ENST00000535493 UBE2HP62256 183 aa16.09■□□□□ 0.17
HDAC4-214ENST00000535493 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
HDAC4-214ENST00000535493 LSG1Q9H089 658 aaKnown RBP16.09■□□□□ 0.17
HDAC4-214ENST00000535493 ATP2B3Q16720 1220 aa16.09■□□□□ 0.17
HDAC4-214ENST00000535493 PPP4R3BQ5MIZ7 849 aa16.09■□□□□ 0.17
HDAC4-214ENST00000535493 PRPF40BQ6NWY9 871 aaKnown RBP16.09■□□□□ 0.17
HDAC4-214ENST00000535493 LIMCH1Q9UPQ0 1083 aa16.09■□□□□ 0.17
HDAC4-214ENST00000535493 RAD50Q92878 1312 aa16.08■□□□□ 0.17
HDAC4-214ENST00000535493 FAM184AQ8NB25 1140 aa16.08■□□□□ 0.16
HDAC4-214ENST00000535493 IL17REQ8NFR9 667 aa16.08■□□□□ 0.16
HDAC4-214ENST00000535493 JAKMIP1Q96N16 626 aaKnown RBP16.08■□□□□ 0.16
HDAC4-214ENST00000535493 CCDC94Q9BW85 323 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-214ENST00000535493 DLC1Q96QB1 1528 aa16.08■□□□□ 0.16
HDAC4-214ENST00000535493 ROBO2Q9HCK4 1378 aa16.07■□□□□ 0.16
HDAC4-214ENST00000535493 OS9Q13438 667 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-214ENST00000535493 HDGFL1Q5TGJ6 251 aa16.07■□□□□ 0.16
HDAC4-214ENST00000535493 CKAP2LQ8IYA6 745 aa16.07■□□□□ 0.16
HDAC4-214ENST00000535493 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
HDAC4-214ENST00000535493 SLC26A8Q96RN1 970 aa16.07■□□□□ 0.16
HDAC4-214ENST00000535493 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
HDAC4-214ENST00000535493 KIF3AQ9Y496 699 aa16.06■□□□□ 0.16
HDAC4-214ENST00000535493 LUZP1Q86V48 1076 aa16.06■□□□□ 0.16
HDAC4-214ENST00000535493 SSH3Q8TE77 659 aa16.06■□□□□ 0.16
HDAC4-214ENST00000535493 HYPKQ9NX55 129 aa16.06■□□□□ 0.16
HDAC4-214ENST00000535493 MTMR6Q9Y217 621 aa16.06■□□□□ 0.16
HDAC4-214ENST00000535493 TAF7Q15545 349 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-214ENST00000535493 UVSSAQ2YD98 709 aa16.05■□□□□ 0.16
HDAC4-214ENST00000535493 TFIP11Q9UBB9 837 aaKnown RBP16.05■□□□□ 0.16
HDAC4-214ENST00000535493 PA2G4Q9UQ80 394 aaKnown RBP16.05■□□□□ 0.16
HDAC4-214ENST00000535493 NEO1Q92859 1461 aa16.05■□□□□ 0.16
HDAC4-214ENST00000535493 RIOK3O14730 519 aaKnown RBP16.05■□□□□ 0.16
HDAC4-214ENST00000535493 ST3GAL1Q11201 340 aa16.05■□□□□ 0.16
HDAC4-214ENST00000535493 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-214ENST00000535493 GNAT3A8MTJ3 354 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 PTGS1P23219 599 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 LRMPQ12912 555 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 ME3Q16798 604 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 TMEM87AQ8NBN3 555 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 FUCA2Q9BTY2 467 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 PI4KAP2A4QPH2 592 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 LIG1P18858 919 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 MTERF4Q7Z6M4 381 aaKnown RBP16.04■□□□□ 0.16
HDAC4-214ENST00000535493 CNTROBQ8N137 903 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 PI4KAP1Q8N8J0 262 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 PDRG1Q9NUG6 133 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 NRBP1Q9UHY1 535 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
HDAC4-214ENST00000535493 KCNQ3O43525 872 aa16.03■□□□□ 0.16
HDAC4-214ENST00000535493 DIAPH3Q9NSV4 1193 aa16.03■□□□□ 0.16
HDAC4-214ENST00000535493 ZSCAN20P17040 1043 aaPredicted RBP16.03■□□□□ 0.16
HDAC4-214ENST00000535493 STK3Q13188 491 aa16.03■□□□□ 0.16
HDAC4-214ENST00000535493 NGDNQ8NEJ9 315 aaKnown RBP16.03■□□□□ 0.16
HDAC4-214ENST00000535493 KIAA1524Q8TCG1 905 aa16.03■□□□□ 0.16
HDAC4-214ENST00000535493 PRIMPOLQ96LW4 560 aa16.03■□□□□ 0.16
HDAC4-214ENST00000535493 TAF6LQ9Y6J9 622 aa16.03■□□□□ 0.16
HDAC4-214ENST00000535493 PEAK1Q9H792 1746 aa16.03■□□□□ 0.16
HDAC4-214ENST00000535493 SSH2Q76I76 1423 aa16.03■□□□□ 0.16
HDAC4-214ENST00000535493 U2AF2P26368 475 aaKnown RBP eCLIP16.03■□□□□ 0.16
HDAC4-214ENST00000535493 CDC37L1Q7L3B6 337 aa16.03■□□□□ 0.16
HDAC4-214ENST00000535493 TTC6Q86TZ1 520 aa16.03■□□□□ 0.16
HDAC4-214ENST00000535493 SMAP1Q8IYB5 467 aaPredicted RBP16.03■□□□□ 0.16
HDAC4-214ENST00000535493 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.03■□□□□ 0.16
HDAC4-214ENST00000535493 CEP170BQ9Y4F5 1589 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-214ENST00000535493 NAA30Q147X3 362 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms