RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 TTLL6Q8N841 843 aa11.68□□□□□ -0.54
CLIP1-206ENST00000535290 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
CLIP1-206ENST00000535290 NCAPD2Q15021 1401 aa11.68□□□□□ -0.54
CLIP1-206ENST00000535290 DDNO94850 711 aaPredicted RBP11.67□□□□□ -0.54
CLIP1-206ENST00000535290 ERFEQ4G0M1 354 aa11.67□□□□□ -0.54
CLIP1-206ENST00000535290 POTEHQ6S545 545 aa11.67□□□□□ -0.54
CLIP1-206ENST00000535290 EYA1Q99502 592 aa11.67□□□□□ -0.54
CLIP1-206ENST00000535290 KIF24Q5T7B8 1368 aa11.67□□□□□ -0.54
CLIP1-206ENST00000535290 TONSLQ96HA7 1378 aa11.67□□□□□ -0.54
CLIP1-206ENST00000535290 TMEM88BA6NKF7 163 aa11.66□□□□□ -0.54
CLIP1-206ENST00000535290 PTCD1O75127 700 aaKnown RBP11.66□□□□□ -0.54
CLIP1-206ENST00000535290 ITGBL1O95965 494 aaPredicted RBP11.66□□□□□ -0.54
CLIP1-206ENST00000535290 SLC4A2P04920 1241 aa11.66□□□□□ -0.54
CLIP1-206ENST00000535290 NEUROD1Q13562 356 aa11.66□□□□□ -0.54
CLIP1-206ENST00000535290 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.54
CLIP1-206ENST00000535290 ERVV-2B6SEH9 535 aa11.65□□□□□ -0.54
CLIP1-206ENST00000535290 NFIXQ14938 502 aa11.65□□□□□ -0.54
CLIP1-206ENST00000535290 USPL1Q5W0Q7 1092 aa11.65□□□□□ -0.54
CLIP1-206ENST00000535290 C2CD5Q86YS7 1000 aa11.65□□□□□ -0.54
CLIP1-206ENST00000535290 TESK2Q96S53 571 aa11.65□□□□□ -0.54
CLIP1-206ENST00000535290 PDE4DIPQ5VU43 2346 aa11.64□□□□□ -0.55
CLIP1-206ENST00000535290 PPM1GO15355 546 aaPredicted RBP11.64□□□□□ -0.55
CLIP1-206ENST00000535290 INTS5Q6P9B9 1019 aaKnown RBP11.64□□□□□ -0.55
CLIP1-206ENST00000535290 LDHDQ86WU2 507 aa11.64□□□□□ -0.55
CLIP1-206ENST00000535290 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
CLIP1-206ENST00000535290 ZNF219Q9P2Y4 722 aaPredicted RBP11.64□□□□□ -0.55
CLIP1-206ENST00000535290 RASSF10A6NK89 507 aa11.63□□□□□ -0.55
CLIP1-206ENST00000535290 ZPR1O75312 459 aa11.63□□□□□ -0.55
CLIP1-206ENST00000535290 MAP2K1Q02750 393 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-206ENST00000535290 WDR33Q9C0J8 1336 aaKnown RBP11.62□□□□□ -0.55
CLIP1-206ENST00000535290 H0YIN7 160 aa11.62□□□□□ -0.55
CLIP1-206ENST00000535290 C21orf2O43822 256 aa11.62□□□□□ -0.55
CLIP1-206ENST00000535290 SERPINB2P05120 415 aa11.62□□□□□ -0.55
CLIP1-206ENST00000535290 CABP4P57796 275 aa11.62□□□□□ -0.55
CLIP1-206ENST00000535290 DEFB115Q30KQ5 88 aa11.62□□□□□ -0.55
CLIP1-206ENST00000535290 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
CLIP1-206ENST00000535290 COL5A3P25940 1745 aaPredicted RBP11.62□□□□□ -0.55
CLIP1-206ENST00000535290 TIAM2Q8IVF5 1701 aa11.62□□□□□ -0.55
CLIP1-206ENST00000535290 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
CLIP1-206ENST00000535290 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
CLIP1-206ENST00000535290 CARMIL3Q8ND23 1372 aa11.61□□□□□ -0.55
CLIP1-206ENST00000535290 ZNF831Q5JPB2 1677 aa11.61□□□□□ -0.55
CLIP1-206ENST00000535290 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
CLIP1-206ENST00000535290 ST20-MTHFSA0A0A6YYL1 179 aa11.6□□□□□ -0.55
CLIP1-206ENST00000535290 IQCA1LA6NCM1 817 aa11.6□□□□□ -0.55
CLIP1-206ENST00000535290 EAPPQ56P03 285 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-206ENST00000535290 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-206ENST00000535290 HSP90AB1P08238 724 aaKnown RBP11.59□□□□□ -0.55
CLIP1-206ENST00000535290 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
CLIP1-206ENST00000535290 NFATC2IPQ8NCF5 419 aa11.59□□□□□ -0.55
CLIP1-206ENST00000535290 ZNF622Q969S3 477 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■□□□□ 10.3
CLIP1-206ENST00000535290 L3MBTL3Q96JM7 780 aaPredicted RBP11.59□□□□□ -0.55
CLIP1-206ENST00000535290 TAOK3Q9H2K8 898 aa11.59□□□□□ -0.55
CLIP1-206ENST00000535290 TSKSQ9UJT2 592 aa11.59□□□□□ -0.55
CLIP1-206ENST00000535290 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
CLIP1-206ENST00000535290 CCDC88AQ3V6T2 1871 aa11.58□□□□□ -0.56
CLIP1-206ENST00000535290 MAP1SQ66K74 1059 aaPredicted RBP11.58□□□□□ -0.56
CLIP1-206ENST00000535290 CNTROBQ8N137 903 aa11.58□□□□□ -0.56
CLIP1-206ENST00000535290 MCOLN1Q9GZU1 580 aa11.58□□□□□ -0.56
CLIP1-206ENST00000535290 NARFQ9UHQ1 456 aa11.58□□□□□ -0.56
CLIP1-206ENST00000535290 ABT1Q9ULW3 272 aaKnown RBP11.58□□□□□ -0.56
CLIP1-206ENST00000535290 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
CLIP1-206ENST00000535290 LTBP3Q9NS15 1303 aa11.58□□□□□ -0.56
CLIP1-206ENST00000535290 ADAMTS7Q9UKP4 1686 aa11.57□□□□□ -0.56
CLIP1-206ENST00000535290 EIF4A2Q14240 407 aaKnown RBP11.57□□□□□ -0.56
CLIP1-206ENST00000535290 ZNF530Q6P9A1 599 aaPredicted RBP11.57□□□□□ -0.56
CLIP1-206ENST00000535290 BICDL1Q6ZP65 573 aa11.57□□□□□ -0.56
CLIP1-206ENST00000535290 CCDC24Q8N4L8 307 aa11.57□□□□□ -0.56
CLIP1-206ENST00000535290 CARD14Q9BXL6 1004 aa11.57□□□□□ -0.56
CLIP1-206ENST00000535290 MTHFSP49914 203 aa11.56□□□□□ -0.56
CLIP1-206ENST00000535290 CAPNS2Q96L46 248 aa11.56□□□□□ -0.56
CLIP1-206ENST00000535290 BEGAINQ9BUH8 593 aa11.56□□□□□ -0.56
CLIP1-206ENST00000535290 POLKQ9UBT6 870 aa11.56□□□□□ -0.56
CLIP1-206ENST00000535290 CYP19A1P11511 503 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-206ENST00000535290 EPHX2P34913 555 aa11.55□□□□□ -0.56
CLIP1-206ENST00000535290 FMR1Q06787 632 aaKnown RBP eCLIP11.55□□□□□ -0.56
CLIP1-206ENST00000535290 GRM1Q13255 1194 aa11.55□□□□□ -0.56
CLIP1-206ENST00000535290 PLEKHO1Q53GL0 409 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-206ENST00000535290 GPR101Q96P66 508 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-206ENST00000535290 HACL1Q9UJ83 578 aa11.55□□□□□ -0.56
CLIP1-206ENST00000535290 ZNF541Q9H0D2 1346 aa11.55□□□□□ -0.56
CLIP1-206ENST00000535290 AFDNP55196 1824 aaKnown RBP11.54□□□□□ -0.56
CLIP1-206ENST00000535290 CYP4F22Q6NT55 531 aa11.54□□□□□ -0.56
CLIP1-206ENST00000535290 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
CLIP1-206ENST00000535290 BRIP1Q9BX63 1249 aa11.54□□□□□ -0.56
CLIP1-206ENST00000535290 ZBTB1Q9Y2K1 713 aa11.54□□□□□ -0.56
CLIP1-206ENST00000535290 NRXN2Q9P2S2 1712 aa11.54□□□□□ -0.56
CLIP1-206ENST00000535290 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
CLIP1-206ENST00000535290 COL15A1P39059 1388 aa11.54□□□□□ -0.56
CLIP1-206ENST00000535290 PDE6BP35913 854 aa11.53□□□□□ -0.56
CLIP1-206ENST00000535290 DDX21Q9NR30 783 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLIP1-206ENST00000535290 TJP1Q07157 1748 aa11.52□□□□□ -0.56
CLIP1-206ENST00000535290 SLC24A1O60721 1099 aa11.52□□□□□ -0.57
CLIP1-206ENST00000535290 AOC2O75106 756 aa11.52□□□□□ -0.57
CLIP1-206ENST00000535290 TBC1D9BQ66K14 1250 aa11.52□□□□□ -0.57
CLIP1-206ENST00000535290 PRR5LQ6MZQ0 368 aa11.52□□□□□ -0.57
CLIP1-206ENST00000535290 PRPF40BQ6NWY9 871 aaKnown RBP11.52□□□□□ -0.57
CLIP1-206ENST00000535290 PNMA8AQ86V59 439 aaPredicted RBP11.52□□□□□ -0.57
CLIP1-206ENST00000535290 PDZRN3Q9UPQ7 1066 aa11.52□□□□□ -0.57
CLIP1-206ENST00000535290 RNF123Q5XPI4 1314 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms