RNA–Protein interactions for RNA: ENST00000535239.5

MSRB3-205, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-205ENST00000535239 EIF5P55010 431 aaKnown RBP20.28■□□□□ 0.84
MSRB3-205ENST00000535239 DCTN1Q14203 1278 aa20.28■□□□□ 0.84
MSRB3-205ENST00000535239 GPR162Q16538 588 aa20.28■□□□□ 0.84
MSRB3-205ENST00000535239 KIF13BQ9NQT8 1826 aa20.27■□□□□ 0.84
MSRB3-205ENST00000535239 YY1P25490 414 aa20.27■□□□□ 0.84
MSRB3-205ENST00000535239 TM4SF1P30408 202 aa20.27■□□□□ 0.84
MSRB3-205ENST00000535239 SRP68Q9UHB9 627 aaKnown RBP20.27■□□□□ 0.84
MSRB3-205ENST00000535239 NARFQ9UHQ1 456 aa20.27■□□□□ 0.84
MSRB3-205ENST00000535239 COL15A1P39059 1388 aa20.26■□□□□ 0.83
MSRB3-205ENST00000535239 FKBP8Q14318 412 aa20.26■□□□□ 0.83
MSRB3-205ENST00000535239 MAPK8IP3Q9UPT6 1336 aa20.26■□□□□ 0.83
MSRB3-205ENST00000535239 ZPR1O75312 459 aa20.25■□□□□ 0.83
MSRB3-205ENST00000535239 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
MSRB3-205ENST00000535239 CHD4Q14839 1912 aa20.24■□□□□ 0.83
MSRB3-205ENST00000535239 GRIN3BO60391 1043 aa20.24■□□□□ 0.83
MSRB3-205ENST00000535239 IL6STP40189 918 aaPredicted RBP20.24■□□□□ 0.83
MSRB3-205ENST00000535239 TGFB2P61812 414 aa20.24■□□□□ 0.83
MSRB3-205ENST00000535239 USPL1Q5W0Q7 1092 aa20.24■□□□□ 0.83
MSRB3-205ENST00000535239 PARP3Q9Y6F1 533 aa20.24■□□□□ 0.83
MSRB3-205ENST00000535239 C10orf71Q711Q0 1435 aa20.24■□□□□ 0.83
MSRB3-205ENST00000535239 A0A087WZG4 1122 aa20.23■□□□□ 0.83
MSRB3-205ENST00000535239 SNRPA1P09661 255 aaKnown RBP20.23■□□□□ 0.83
MSRB3-205ENST00000535239 YBX3P16989 372 aaKnown RBP eCLIP20.23■□□□□ 0.83
MSRB3-205ENST00000535239 CANXP27824 592 aaKnown RBP20.23■□□□□ 0.83
MSRB3-205ENST00000535239 BCL2L12Q9HB09 334 aa20.22■□□□□ 0.83
MSRB3-205ENST00000535239 USP16Q9Y5T5 823 aa20.22■□□□□ 0.83
MSRB3-205ENST00000535239 DDR1Q08345 913 aa20.21■□□□□ 0.83
MSRB3-205ENST00000535239 KIAA1551Q9HCM1 1747 aa20.2■□□□□ 0.82
MSRB3-205ENST00000535239 POLRMTO00411 1230 aaKnown RBP20.2■□□□□ 0.82
MSRB3-205ENST00000535239 A1BGP04217 495 aa20.2■□□□□ 0.82
MSRB3-205ENST00000535239 TMPOP42166 694 aaKnown RBP20.2■□□□□ 0.82
MSRB3-205ENST00000535239 PXDNLA1KZ92 1463 aa20.19■□□□□ 0.82
MSRB3-205ENST00000535239 KDM3BQ7LBC6 1761 aa20.19■□□□□ 0.82
MSRB3-205ENST00000535239 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
MSRB3-205ENST00000535239 RIPK4P57078 832 aa20.19■□□□□ 0.82
MSRB3-205ENST00000535239 BABAM1Q9NWV8 329 aa20.19■□□□□ 0.82
MSRB3-205ENST00000535239 LMOD3Q0VAK6 560 aa20.18■□□□□ 0.82
MSRB3-205ENST00000535239 WDR43Q15061 677 aaKnown RBP eCLIP20.18■□□□□ 0.82
MSRB3-205ENST00000535239 PELP1Q8IZL8 1130 aaKnown RBP20.18■□□□□ 0.82
MSRB3-205ENST00000535239 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
MSRB3-205ENST00000535239 MIS18AQ9NYP9 233 aa20.18■□□□□ 0.82
MSRB3-205ENST00000535239 ADAMTS8Q9UP79 889 aa20.18■□□□□ 0.82
MSRB3-205ENST00000535239 PRAMEF22A3QJZ6 481 aa20.17■□□□□ 0.82
MSRB3-205ENST00000535239 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
MSRB3-205ENST00000535239 NFIXQ14938 502 aa20.17■□□□□ 0.82
MSRB3-205ENST00000535239 THUMPD2Q9BTF0 503 aaKnown RBP20.17■□□□□ 0.82
MSRB3-205ENST00000535239 NRXN2Q9P2S2 1712 aa20.16■□□□□ 0.82
MSRB3-205ENST00000535239 RGL2O15211 777 aa20.15■□□□□ 0.82
MSRB3-205ENST00000535239 GIGYF1O75420 1035 aaPredicted RBP20.15■□□□□ 0.82
MSRB3-205ENST00000535239 KCNA3P22001 575 aa20.15■□□□□ 0.82
MSRB3-205ENST00000535239 SCN7AQ01118 1682 aa20.14■□□□□ 0.81
MSRB3-205ENST00000535239 CAMTA2O94983 1202 aa20.14■□□□□ 0.81
MSRB3-205ENST00000535239 TBC1D2BQ9UPU7 963 aa20.14■□□□□ 0.81
MSRB3-205ENST00000535239 A0A0G2JLW4 131 aa20.13■□□□□ 0.81
MSRB3-205ENST00000535239 NBPF26B4DH59 902 aa20.13■□□□□ 0.81
MSRB3-205ENST00000535239 SERPINB2P05120 415 aa20.13■□□□□ 0.81
MSRB3-205ENST00000535239 NBPF10Q6P3W6 841 aaKnown RBP20.13■□□□□ 0.81
MSRB3-205ENST00000535239 CLEC4GQ6UXB4 293 aa20.13■□□□□ 0.81
MSRB3-205ENST00000535239 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
MSRB3-205ENST00000535239 NBPF15Q8N660 670 aa20.13■□□□□ 0.81
MSRB3-205ENST00000535239 N4BP2Q86UW6 1770 aaPredicted RBP20.13■□□□□ 0.81
MSRB3-205ENST00000535239 BRCA1P38398 1863 aaKnown RBP20.12■□□□□ 0.81
MSRB3-205ENST00000535239 AFDNP55196 1824 aaKnown RBP20.12■□□□□ 0.81
MSRB3-205ENST00000535239 DPEP1P16444 411 aa20.12■□□□□ 0.81
MSRB3-205ENST00000535239 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
MSRB3-205ENST00000535239 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
MSRB3-205ENST00000535239 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
MSRB3-205ENST00000535239 LAMB4A4D0S4 1761 aa20.12■□□□□ 0.81
MSRB3-205ENST00000535239 TBC1D9BQ66K14 1250 aa20.11■□□□□ 0.81
MSRB3-205ENST00000535239 ZNF784Q8NCA9 323 aaPredicted RBP20.11■□□□□ 0.81
MSRB3-205ENST00000535239 BCORQ6W2J9 1755 aa20.1■□□□□ 0.81
MSRB3-205ENST00000535239 PIP4K2AP48426 406 aaPredicted RBP20.09■□□□□ 0.81
MSRB3-205ENST00000535239 PIM2Q9P1W9 311 aa20.09■□□□□ 0.81
MSRB3-205ENST00000535239 TSPYL4Q9UJ04 414 aa20.09■□□□□ 0.81
MSRB3-205ENST00000535239 ZNF330Q9Y3S2 320 aaPredicted RBP20.09■□□□□ 0.81
MSRB3-205ENST00000535239 ERBB4Q15303 1308 aa20.08■□□□□ 0.81
MSRB3-205ENST00000535239 CHL1O00533 1208 aa20.08■□□□□ 0.81
MSRB3-205ENST00000535239 RRP7AQ9Y3A4 280 aaKnown RBP20.08■□□□□ 0.81
MSRB3-205ENST00000535239 CARMIL3Q8ND23 1372 aa20.08■□□□□ 0.8
MSRB3-205ENST00000535239 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
MSRB3-205ENST00000535239 BICDL1Q6ZP65 573 aa20.06■□□□□ 0.8
MSRB3-205ENST00000535239 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
MSRB3-205ENST00000535239 PDZRN3Q9UPQ7 1066 aa20.06■□□□□ 0.8
MSRB3-205ENST00000535239 BCS1LQ9Y276 419 aa20.06■□□□□ 0.8
MSRB3-205ENST00000535239 ARFGEF1Q9Y6D6 1849 aa20.05■□□□□ 0.8
MSRB3-205ENST00000535239 WWC3Q9ULE0 1092 aa20.05■□□□□ 0.8
MSRB3-205ENST00000535239 ZNF652Q9Y2D9 606 aa20.05■□□□□ 0.8
MSRB3-205ENST00000535239 ERVV-1B6SEH8 477 aa20.04■□□□□ 0.8
MSRB3-205ENST00000535239 CHRNA5P30532 468 aa20.04■□□□□ 0.8
MSRB3-205ENST00000535239 CCDC184Q52MB2 194 aa20.04■□□□□ 0.8
MSRB3-205ENST00000535239 PRR5LQ6MZQ0 368 aa20.04■□□□□ 0.8
MSRB3-205ENST00000535239 BRIP1Q9BX63 1249 aa20.04■□□□□ 0.8
MSRB3-205ENST00000535239 DALRD3Q5D0E6 543 aaKnown RBP20.03■□□□□ 0.8
MSRB3-205ENST00000535239 ADCY9O60503 1353 aa20.03■□□□□ 0.8
MSRB3-205ENST00000535239 APAF1O14727 1248 aa20.02■□□□□ 0.8
MSRB3-205ENST00000535239 LRP10Q7Z4F1 713 aa20.02■□□□□ 0.8
MSRB3-205ENST00000535239 CFAP44Q96MT7 982 aa20.02■□□□□ 0.8
MSRB3-205ENST00000535239 DLEC1Q9Y238 1755 aa20.02■□□□□ 0.8
MSRB3-205ENST00000535239 ANP32CO43423 234 aa20.01■□□□□ 0.79
MSRB3-205ENST00000535239 ZNF853P0CG23 659 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms