RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 CDC42BPAQ5VT25 1732 aa8.31□□□□□ -1.08
ATM-224ENST00000534625 DIP2CQ9Y2E4 1556 aa8.31□□□□□ -1.08
ATM-224ENST00000534625 PRKCSHP14314 528 aaPredicted RBP8.3□□□□□ -1.08
ATM-224ENST00000534625 VWA5B2Q8N398 1253 aa8.3□□□□□ -1.08
ATM-224ENST00000534625 ZNF777Q9ULD5 760 aaPredicted RBP8.3□□□□□ -1.08
ATM-224ENST00000534625 SETD1BQ9UPS6 1966 aaKnown RBP8.3□□□□□ -1.08
ATM-224ENST00000534625 ARHGEF15O94989 841 aa8.29□□□□□ -1.08
ATM-224ENST00000534625 HNRNPMP52272 730 aaKnown RBP eCLIP8.29□□□□□ -1.08
ATM-224ENST00000534625 REREQ9P2R6 1566 aa8.29□□□□□ -1.08
ATM-224ENST00000534625 ITSN2Q9NZM3 1697 aa8.29□□□□□ -1.08
ATM-224ENST00000534625 ABCA6Q8N139 1617 aa8.29□□□□□ -1.08
ATM-224ENST00000534625 KIDINS220Q9ULH0 1771 aa8.28□□□□□ -1.08
ATM-224ENST00000534625 SLC35F4A4IF30 521 aa8.28□□□□□ -1.08
ATM-224ENST00000534625 GIGYF1O75420 1035 aaPredicted RBP8.28□□□□□ -1.08
ATM-224ENST00000534625 SLURP2P0DP57 97 aa8.28□□□□□ -1.08
ATM-224ENST00000534625 RELBQ01201 579 aa8.28□□□□□ -1.08
ATM-224ENST00000534625 FBXO41Q8TF61 875 aa8.28□□□□□ -1.08
ATM-224ENST00000534625 CFDP1Q9UEE9 299 aaPredicted RBP8.28□□□□□ -1.08
ATM-224ENST00000534625 PCDHB9Q9Y5E1 797 aa8.28□□□□□ -1.08
ATM-224ENST00000534625 DNMT3AQ9Y6K1 912 aaPredicted RBP8.28□□□□□ -1.08
ATM-224ENST00000534625 AGLP35573 1532 aa8.28□□□□□ -1.08
ATM-224ENST00000534625 KIAA1107Q9UPP5 1409 aa8.28□□□□□ -1.08
ATM-224ENST00000534625 SAMD9LQ8IVG5 1584 aa8.27□□□□□ -1.09
ATM-224ENST00000534625 MTUS2Q5JR59 1369 aa8.27□□□□□ -1.09
ATM-224ENST00000534625 CCNB3Q8WWL7 1395 aa8.27□□□□□ -1.09
ATM-224ENST00000534625 CDC14CA4D256 554 aa8.27□□□□□ -1.09
ATM-224ENST00000534625 CTSOP43234 321 aaPredicted RBP8.27□□□□□ -1.09
ATM-224ENST00000534625 NR1H3Q13133 447 aa8.27□□□□□ -1.09
ATM-224ENST00000534625 SEPT12Q8IYM1 358 aa8.27□□□□□ -1.09
ATM-224ENST00000534625 CEP162Q5TB80 1403 aa8.27□□□□□ -1.09
ATM-224ENST00000534625 SPAG9O60271 1321 aaKnown RBP8.27□□□□□ -1.09
ATM-224ENST00000534625 SYCP2Q9BX26 1530 aa8.26□□□□□ -1.09
ATM-224ENST00000534625 ADH1AP07327 375 aa8.26□□□□□ -1.09
ATM-224ENST00000534625 ITGA6P23229 1130 aa8.26□□□□□ -1.09
ATM-224ENST00000534625 MARSP56192 900 aaKnown RBP8.26□□□□□ -1.09
ATM-224ENST00000534625 INSM2Q96T92 566 aaPredicted RBP8.26□□□□□ -1.09
ATM-224ENST00000534625 ZNF395Q9H8N7 513 aaPredicted RBP8.26□□□□□ -1.09
ATM-224ENST00000534625 NDUFB9Q9Y6M9 179 aa8.26□□□□□ -1.09
ATM-224ENST00000534625 ZNF644Q9H582 1327 aaPredicted RBP8.26□□□□□ -1.09
ATM-224ENST00000534625 SV2AQ7L0J3 742 aa8.25□□□□□ -1.09
ATM-224ENST00000534625 PLEKHH2Q8IVE3 1493 aa8.25□□□□□ -1.09
ATM-224ENST00000534625 LOC105371045A0A1W2PR82 267 aa8.24□□□□□ -1.09
ATM-224ENST00000534625 IGHA1P01876 353 aa8.24□□□□□ -1.09
ATM-224ENST00000534625 PTGIRP43119 386 aa8.24□□□□□ -1.09
ATM-224ENST00000534625 ESF1Q9H501 851 aaKnown RBP8.24□□□□□ -1.09
ATM-224ENST00000534625 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
ATM-224ENST00000534625 PREX1Q8TCU6 1659 aa8.24□□□□□ -1.09
ATM-224ENST00000534625 UHRF1BP1Q6BDS2 1440 aa8.23□□□□□ -1.09
ATM-224ENST00000534625 FOXD4L5Q5VV16 416 aaPredicted RBP8.23□□□□□ -1.09
ATM-224ENST00000534625 RNF217Q8TC41 542 aa8.23□□□□□ -1.09
ATM-224ENST00000534625 MBD5Q9P267 1494 aa8.23□□□□□ -1.09
ATM-224ENST00000534625 C3P01024 1663 aa8.23□□□□□ -1.09
ATM-224ENST00000534625 ATP7AQ04656 1500 aa8.23□□□□□ -1.09
ATM-224ENST00000534625 TIAM1Q13009 1591 aa8.22□□□□□ -1.09
ATM-224ENST00000534625 CNTLNQ9NXG0 1405 aa8.22□□□□□ -1.09
ATM-224ENST00000534625 KANK3Q6NY19 840 aa8.22□□□□□ -1.09
ATM-224ENST00000534625 LYPD4Q6UWN0 246 aa8.22□□□□□ -1.09
ATM-224ENST00000534625 EHBP1L1Q8N3D4 1523 aa8.22□□□□□ -1.09
ATM-224ENST00000534625 ZMYM3Q14202 1370 aa8.22□□□□□ -1.09
ATM-224ENST00000534625 A2MP01023 1474 aa8.21□□□□□ -1.09
ATM-224ENST00000534625 STRCQ7RTU9 1775 aa8.21□□□□□ -1.1
ATM-224ENST00000534625 SCARF2Q96GP6 870 aaPredicted RBP8.21□□□□□ -1.1
ATM-224ENST00000534625 POLMQ9NP87 494 aaPredicted RBP8.21□□□□□ -1.1
ATM-224ENST00000534625 TBC1D2BQ9UPU7 963 aa8.21□□□□□ -1.1
ATM-224ENST00000534625 PLXNC1O60486 1568 aa8.21□□□□□ -1.1
ATM-224ENST00000534625 INO80Q9ULG1 1556 aaPredicted RBP8.21□□□□□ -1.1
ATM-224ENST00000534625 SUPT6HQ7KZ85 1726 aaKnown RBP8.2□□□□□ -1.1
ATM-224ENST00000534625 ADAMTS2O95450 1211 aa8.2□□□□□ -1.1
ATM-224ENST00000534625 MCCD1P59942 119 aaPredicted RBP8.2□□□□□ -1.1
ATM-224ENST00000534625 ERVK-9P63128 1117 aa8.2□□□□□ -1.1
ATM-224ENST00000534625 FOXK2Q01167 660 aa8.2□□□□□ -1.1
ATM-224ENST00000534625 GGT6Q6P531 493 aa8.2□□□□□ -1.1
ATM-224ENST00000534625 RTEL1-TNFRSF6BF6WH68 1400 aa8.2□□□□□ -1.1
ATM-224ENST00000534625 NCOA2Q15596 1464 aa8.19□□□□□ -1.1
ATM-224ENST00000534625 SENP3-EIF4A1A0A087X0R7 540 aa8.19□□□□□ -1.1
ATM-224ENST00000534625 SCTRP47872 440 aa8.19□□□□□ -1.1
ATM-224ENST00000534625 IRF5Q13568 498 aa8.19□□□□□ -1.1
ATM-224ENST00000534625 NPATQ14207 1427 aa8.19□□□□□ -1.1
ATM-224ENST00000534625 MROH2AA6NES4 1674 aa8.18□□□□□ -1.1
ATM-224ENST00000534625 APBB1O00213 710 aa8.18□□□□□ -1.1
ATM-224ENST00000534625 CC2D2BQ6DHV5 1058 aa8.18□□□□□ -1.1
ATM-224ENST00000534625 CCDC125Q86Z20 511 aa8.18□□□□□ -1.1
ATM-224ENST00000534625 DHX29Q7Z478 1369 aaKnown RBP8.18□□□□□ -1.1
ATM-224ENST00000534625 VPS8Q8N3P4 1428 aa8.18□□□□□ -1.1
ATM-224ENST00000534625 KANK4Q5T7N3 995 aaPredicted RBP8.17□□□□□ -1.1
ATM-224ENST00000534625 RNF20Q5VTR2 975 aa8.17□□□□□ -1.1
ATM-224ENST00000534625 ZNF330Q9Y3S2 320 aaPredicted RBP8.17□□□□□ -1.1
ATM-224ENST00000534625 PTPRTO14522 1441 aa8.17□□□□□ -1.1
ATM-224ENST00000534625 PTPRKQ15262 1439 aa8.17□□□□□ -1.1
ATM-224ENST00000534625 ADGBQ8N7X0 1667 aa8.17□□□□□ -1.1
ATM-224ENST00000534625 ATP5J2-PTCD1G3V325 749 aa8.16□□□□□ -1.1
ATM-224ENST00000534625 CELA2BP08218 269 aaPredicted RBP8.16□□□□□ -1.1
ATM-224ENST00000534625 RNF144AP50876 292 aaPredicted RBP8.16□□□□□ -1.1
ATM-224ENST00000534625 CLTCQ00610 1675 aaKnown RBP8.16□□□□□ -1.1
ATM-224ENST00000534625 SRSF11Q05519 484 aaKnown RBP8.16□□□□□ -1.1
ATM-224ENST00000534625 CAMSAP2Q08AD1 1489 aa8.16□□□□□ -1.1
ATM-224ENST00000534625 NCOA1Q15788 1441 aa8.16□□□□□ -1.1
ATM-224ENST00000534625 CCDC141Q6ZP82 1450 aa8.16□□□□□ -1.1
ATM-224ENST00000534625 LRRC9Q6ZRR7 1453 aa8.16□□□□□ -1.1
ATM-224ENST00000534625 CCDC85AQ96PX6 553 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms