RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 SEC24BO95487 1268 aa11.04□□□□□ -0.64
LINC00958-207ENST00000534477 PPP1R15BQ5SWA1 713 aa11.04□□□□□ -0.64
LINC00958-207ENST00000534477 SMIM5Q71RC9 77 aa11.04□□□□□ -0.64
LINC00958-207ENST00000534477 AK7Q96M32 723 aa11.04□□□□□ -0.64
LINC00958-207ENST00000534477 C5P01031 1676 aa11.04□□□□□ -0.64
LINC00958-207ENST00000534477 TMC2Q8TDI7 906 aa11.03□□□□□ -0.64
LINC00958-207ENST00000534477 SPG7Q9UQ90 795 aa11.03□□□□□ -0.64
LINC00958-207ENST00000534477 MAP3K5Q99683 1374 aa11.03□□□□□ -0.64
LINC00958-207ENST00000534477 TOGARAM1Q9Y4F4 1720 aa11.02□□□□□ -0.65
LINC00958-207ENST00000534477 SLC39A7Q92504 469 aa11.02□□□□□ -0.65
LINC00958-207ENST00000534477 L3MBTL3Q96JM7 780 aaPredicted RBP11.02□□□□□ -0.65
LINC00958-207ENST00000534477 ITGB4P16144 1822 aa11.02□□□□□ -0.65
LINC00958-207ENST00000534477 MAP2P11137 1827 aaKnown RBP11.01□□□□□ -0.65
LINC00958-207ENST00000534477 CAMK2BQ13554 666 aa11.01□□□□□ -0.65
LINC00958-207ENST00000534477 PIGBQ92521 554 aa11.01□□□□□ -0.65
LINC00958-207ENST00000534477 SMARCC1Q92922 1105 aaPredicted RBP11.01□□□□□ -0.65
LINC00958-207ENST00000534477 EYA1Q99502 592 aa11.01□□□□□ -0.65
LINC00958-207ENST00000534477 TMEM121BQ9BXQ6 578 aaPredicted RBP11.01□□□□□ -0.65
LINC00958-207ENST00000534477 TMOD3Q9NYL9 352 aa11.01□□□□□ -0.65
LINC00958-207ENST00000534477 GIGYF1O75420 1035 aaPredicted RBP11□□□□□ -0.65
LINC00958-207ENST00000534477 YBX3P16989 372 aaKnown RBP eCLIP11□□□□□ -0.656e-9■□□□□ 9
LINC00958-207ENST00000534477 C4BP0C0L5 1744 aa11□□□□□ -0.65
LINC00958-207ENST00000534477 KIF24Q5T7B8 1368 aa11□□□□□ -0.65
LINC00958-207ENST00000534477 TAF1LQ8IZX4 1826 aa11□□□□□ -0.65
LINC00958-207ENST00000534477 PKD1L3Q7Z443 1732 aa10.99□□□□□ -0.65
LINC00958-207ENST00000534477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.99□□□□□ -0.65
LINC00958-207ENST00000534477 GNPATO15228 680 aa10.99□□□□□ -0.65
LINC00958-207ENST00000534477 AMIGO3Q86WK7 504 aa10.99□□□□□ -0.65
LINC00958-207ENST00000534477 FLAD1Q8NFF5 587 aa10.99□□□□□ -0.65
LINC00958-207ENST00000534477 ARIH1Q9Y4X5 557 aaPredicted RBP10.99□□□□□ -0.65
LINC00958-207ENST00000534477 LOC102724428A0A0B4J2F2 783 aa10.98□□□□□ -0.65
LINC00958-207ENST00000534477 ATP6V1AP38606 617 aa10.98□□□□□ -0.65
LINC00958-207ENST00000534477 SIK1P57059 783 aa10.98□□□□□ -0.65
LINC00958-207ENST00000534477 C1QTNF8P60827 252 aa10.98□□□□□ -0.65
LINC00958-207ENST00000534477 EIF4A2Q14240 407 aaKnown RBP10.98□□□□□ -0.65
LINC00958-207ENST00000534477 LINC00116Q8NCU8 138 aa10.98□□□□□ -0.65
LINC00958-207ENST00000534477 ZNF526Q8TF50 670 aaPredicted RBP10.98□□□□□ -0.65
LINC00958-207ENST00000534477 POLKQ9UBT6 870 aa10.98□□□□□ -0.65
LINC00958-207ENST00000534477 ASAP1Q9ULH1 1129 aa10.98□□□□□ -0.65
LINC00958-207ENST00000534477 WASHC2AQ641Q2 1341 aa10.98□□□□□ -0.65
LINC00958-207ENST00000534477 COL24A1Q17RW2 1714 aa10.98□□□□□ -0.65
LINC00958-207ENST00000534477 GRIN3BO60391 1043 aa10.97□□□□□ -0.65
LINC00958-207ENST00000534477 HSPA5P11021 654 aaKnown RBP10.97□□□□□ -0.65
LINC00958-207ENST00000534477 PHKG2P15735 406 aa10.97□□□□□ -0.65
LINC00958-207ENST00000534477 IFNL2Q8IZJ0 200 aa10.97□□□□□ -0.65
LINC00958-207ENST00000534477 CCER1Q8TC90 406 aaPredicted RBP10.97□□□□□ -0.65
LINC00958-207ENST00000534477 PANK3Q9H999 370 aa10.97□□□□□ -0.65
LINC00958-207ENST00000534477 ANKRD26Q9UPS8 1709 aa10.97□□□□□ -0.65
LINC00958-207ENST00000534477 C7P10643 843 aa10.96□□□□□ -0.65
LINC00958-207ENST00000534477 EIF4G2P78344 907 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC00958-207ENST00000534477 ITPK1Q13572 414 aa10.96□□□□□ -0.65
LINC00958-207ENST00000534477 IGSF1Q8N6C5 1336 aa10.95□□□□□ -0.66
LINC00958-207ENST00000534477 HMGB2P26583 209 aaKnown RBP10.95□□□□□ -0.66
LINC00958-207ENST00000534477 FOXK1P85037 733 aa10.95□□□□□ -0.66
LINC00958-207ENST00000534477 DSG2Q14126 1118 aa10.95□□□□□ -0.66
LINC00958-207ENST00000534477 LHX8Q68G74 356 aa10.95□□□□□ -0.66
LINC00958-207ENST00000534477 MORC1Q86VD1 984 aa10.95□□□□□ -0.66
LINC00958-207ENST00000534477 UBR3Q6ZT12 1888 aa10.95□□□□□ -0.66
LINC00958-207ENST00000534477 SEMA3EO15041 775 aa10.94□□□□□ -0.66
LINC00958-207ENST00000534477 CNGB1Q14028 1251 aaPredicted RBP10.94□□□□□ -0.66
LINC00958-207ENST00000534477 ZNF530Q6P9A1 599 aaPredicted RBP10.94□□□□□ -0.66
LINC00958-207ENST00000534477 ATG3Q9NT62 314 aa10.94□□□□□ -0.66
LINC00958-207ENST00000534477 METRNQ9UJH8 293 aa10.94□□□□□ -0.66
LINC00958-207ENST00000534477 TIMELESSQ9UNS1 1208 aa10.94□□□□□ -0.66
LINC00958-207ENST00000534477 COLQQ9Y215 455 aaPredicted RBP10.94□□□□□ -0.66
LINC00958-207ENST00000534477 CD2APQ9Y5K6 639 aa10.94□□□□□ -0.66
LINC00958-207ENST00000534477 ATP10DQ9P241 1426 aa10.93□□□□□ -0.66
LINC00958-207ENST00000534477 TESPA1A2RU30 521 aaPredicted RBP10.93□□□□□ -0.66
LINC00958-207ENST00000534477 SSFA2P28290 1259 aa10.93□□□□□ -0.66
LINC00958-207ENST00000534477 CABP4P57796 275 aa10.93□□□□□ -0.66
LINC00958-207ENST00000534477 PLEKHO1Q53GL0 409 aaPredicted RBP10.93□□□□□ -0.66
LINC00958-207ENST00000534477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC00958-207ENST00000534477 NCAPD2Q15021 1401 aa10.92□□□□□ -0.66
LINC00958-207ENST00000534477 C2orf72A6NCS6 295 aa10.92□□□□□ -0.66
LINC00958-207ENST00000534477 MMP10P09238 476 aa10.92□□□□□ -0.66
LINC00958-207ENST00000534477 C1orf141Q5JVX7 400 aa10.92□□□□□ -0.66
LINC00958-207ENST00000534477 AEBP1Q8IUX7 1158 aa10.92□□□□□ -0.66
LINC00958-207ENST00000534477 GPBP1L1Q9HC44 474 aaPredicted RBP10.92□□□□□ -0.66
LINC00958-207ENST00000534477 RTCBQ9Y3I0 505 aaKnown RBP10.92□□□□□ -0.66
LINC00958-207ENST00000534477 UTRNP46939 3433 aa10.91□□□□□ -0.66
LINC00958-207ENST00000534477 KIF3CO14782 793 aa10.91□□□□□ -0.66
LINC00958-207ENST00000534477 PTCD1O75127 700 aaKnown RBP10.91□□□□□ -0.66
LINC00958-207ENST00000534477 MTHFSP49914 203 aa10.91□□□□□ -0.66
LINC00958-207ENST00000534477 TRAPPC3LQ5T215 181 aa10.91□□□□□ -0.66
LINC00958-207ENST00000534477 SMYD5Q6GMV2 418 aa10.91□□□□□ -0.66
LINC00958-207ENST00000534477 CLSPNQ9HAW4 1339 aa10.9□□□□□ -0.66
LINC00958-207ENST00000534477 HSP90AB1P08238 724 aaKnown RBP10.9□□□□□ -0.66
LINC00958-207ENST00000534477 SULT6B1Q6IMI4 303 aa10.9□□□□□ -0.66
LINC00958-207ENST00000534477 DCAF5Q96JK2 942 aa10.9□□□□□ -0.66
LINC00958-207ENST00000534477 KNSTRNQ9Y448 316 aa10.9□□□□□ -0.66
LINC00958-207ENST00000534477 CICQ96RK0 1608 aaPredicted RBP10.89□□□□□ -0.67
LINC00958-207ENST00000534477 ERVV-2B6SEH9 535 aa10.89□□□□□ -0.67
LINC00958-207ENST00000534477 RFC4P35249 363 aa10.89□□□□□ -0.67
LINC00958-207ENST00000534477 C3orf67Q6ZVT6 689 aa10.89□□□□□ -0.67
LINC00958-207ENST00000534477 PLPP6Q8IY26 295 aa10.89□□□□□ -0.67
LINC00958-207ENST00000534477 BCS1LQ9Y276 419 aa10.89□□□□□ -0.67
LINC00958-207ENST00000534477 A0A0G2JLW4 131 aa10.88□□□□□ -0.67
LINC00958-207ENST00000534477 KDM6AO15550 1401 aaPredicted RBP10.88□□□□□ -0.67
LINC00958-207ENST00000534477 AMOTQ4VCS5 1084 aa10.88□□□□□ -0.67
LINC00958-207ENST00000534477 SLC4A9Q96Q91 983 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms