RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 GPR162Q16538 588 aa20.38■□□□□ 0.85
UBXN1-217ENST00000534176 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
UBXN1-217ENST00000534176 C4AP0C0L4 1744 aa20.38■□□□□ 0.85
UBXN1-217ENST00000534176 COL15A1P39059 1388 aa20.37■□□□□ 0.85
UBXN1-217ENST00000534176 ZNF316A6NFI3 1004 aaPredicted RBP20.37■□□□□ 0.85
UBXN1-217ENST00000534176 SNRPA1P09661 255 aaKnown RBP20.37■□□□□ 0.85
UBXN1-217ENST00000534176 IL6STP40189 918 aaPredicted RBP20.36■□□□□ 0.85
UBXN1-217ENST00000534176 BABAM1Q9NWV8 329 aa20.36■□□□□ 0.85
UBXN1-217ENST00000534176 NARFQ9UHQ1 456 aa20.36■□□□□ 0.85
UBXN1-217ENST00000534176 TGFB2P61812 414 aa20.35■□□□□ 0.85
UBXN1-217ENST00000534176 ZBTB1Q9Y2K1 713 aa20.35■□□□□ 0.85
UBXN1-217ENST00000534176 SMIM5Q71RC9 77 aa20.34■□□□□ 0.85
UBXN1-217ENST00000534176 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
UBXN1-217ENST00000534176 YY1P25490 414 aa20.33■□□□□ 0.85
UBXN1-217ENST00000534176 EIF5P55010 431 aaKnown RBP20.33■□□□□ 0.85
UBXN1-217ENST00000534176 NLGN2Q8NFZ4 835 aa20.33■□□□□ 0.85
UBXN1-217ENST00000534176 DLG5Q8TDM6 1919 aa20.33■□□□□ 0.84
UBXN1-217ENST00000534176 RGL2O15211 777 aa20.32■□□□□ 0.84
UBXN1-217ENST00000534176 CANXP27824 592 aaKnown RBP20.32■□□□□ 0.84
UBXN1-217ENST00000534176 RIPK4P57078 832 aa20.32■□□□□ 0.84
UBXN1-217ENST00000534176 DCTN1Q14203 1278 aa20.32■□□□□ 0.84
UBXN1-217ENST00000534176 KIF13BQ9NQT8 1826 aa20.3■□□□□ 0.84
UBXN1-217ENST00000534176 C10orf71Q711Q0 1435 aa20.3■□□□□ 0.84
UBXN1-217ENST00000534176 TMPOP42166 694 aaKnown RBP20.3■□□□□ 0.84
UBXN1-217ENST00000534176 USPL1Q5W0Q7 1092 aa20.3■□□□□ 0.84
UBXN1-217ENST00000534176 FKBP8Q14318 412 aa20.29■□□□□ 0.84
UBXN1-217ENST00000534176 SRP68Q9UHB9 627 aaKnown RBP20.29■□□□□ 0.84
UBXN1-217ENST00000534176 CHD4Q14839 1912 aa20.28■□□□□ 0.84
UBXN1-217ENST00000534176 TM4SF1P30408 202 aa20.28■□□□□ 0.84
UBXN1-217ENST00000534176 PELP1Q8IZL8 1130 aaKnown RBP20.28■□□□□ 0.84
UBXN1-217ENST00000534176 ANP32CO43423 234 aa20.27■□□□□ 0.84
UBXN1-217ENST00000534176 KCNQ3O43525 872 aa20.27■□□□□ 0.84
UBXN1-217ENST00000534176 ZNF652Q9Y2D9 606 aa20.27■□□□□ 0.84
UBXN1-217ENST00000534176 KDM3BQ7LBC6 1761 aa20.26■□□□□ 0.83
UBXN1-217ENST00000534176 CLEC4GQ6UXB4 293 aa20.26■□□□□ 0.83
UBXN1-217ENST00000534176 ADAMTS8Q9UP79 889 aa20.26■□□□□ 0.83
UBXN1-217ENST00000534176 USP16Q9Y5T5 823 aa20.26■□□□□ 0.83
UBXN1-217ENST00000534176 POLRMTO00411 1230 aaKnown RBP20.25■□□□□ 0.83
UBXN1-217ENST00000534176 CALD1Q05682 793 aaKnown RBP20.25■□□□□ 0.83
UBXN1-217ENST00000534176 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
UBXN1-217ENST00000534176 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
UBXN1-217ENST00000534176 ERBB4Q15303 1308 aa20.25■□□□□ 0.83
UBXN1-217ENST00000534176 GIGYF1O75420 1035 aaPredicted RBP20.24■□□□□ 0.83
UBXN1-217ENST00000534176 A1BGP04217 495 aa20.24■□□□□ 0.83
UBXN1-217ENST00000534176 EIF4A1P60842 406 aaKnown RBP20.24■□□□□ 0.83
UBXN1-217ENST00000534176 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
UBXN1-217ENST00000534176 LAMB4A4D0S4 1761 aa20.23■□□□□ 0.83
UBXN1-217ENST00000534176 NFIXQ14938 502 aa20.23■□□□□ 0.83
UBXN1-217ENST00000534176 DZIP3Q86Y13 1208 aaKnown RBP20.23■□□□□ 0.83
UBXN1-217ENST00000534176 PXDNLA1KZ92 1463 aa20.23■□□□□ 0.83
UBXN1-217ENST00000534176 SCN7AQ01118 1682 aa20.22■□□□□ 0.83
UBXN1-217ENST00000534176 CARMIL3Q8ND23 1372 aa20.22■□□□□ 0.83
UBXN1-217ENST00000534176 UTRNP46939 3433 aa20.22■□□□□ 0.83
UBXN1-217ENST00000534176 DDR1Q08345 913 aa20.22■□□□□ 0.83
UBXN1-217ENST00000534176 YBX3P16989 372 aaKnown RBP eCLIP20.21■□□□□ 0.83
UBXN1-217ENST00000534176 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
UBXN1-217ENST00000534176 BCL2L12Q9HB09 334 aa20.21■□□□□ 0.83
UBXN1-217ENST00000534176 MIS18AQ9NYP9 233 aa20.21■□□□□ 0.83
UBXN1-217ENST00000534176 SERPINB2P05120 415 aa20.2■□□□□ 0.82
UBXN1-217ENST00000534176 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
UBXN1-217ENST00000534176 THUMPD2Q9BTF0 503 aaKnown RBP20.2■□□□□ 0.82
UBXN1-217ENST00000534176 PIM2Q9P1W9 311 aa20.2■□□□□ 0.82
UBXN1-217ENST00000534176 TBC1D2BQ9UPU7 963 aa20.2■□□□□ 0.82
UBXN1-217ENST00000534176 NRXN2Q9P2S2 1712 aa20.19■□□□□ 0.82
UBXN1-217ENST00000534176 CAMTA2O94983 1202 aa20.19■□□□□ 0.82
UBXN1-217ENST00000534176 CHMP4AQ9BY43 222 aa20.19■□□□□ 0.82
UBXN1-217ENST00000534176 NEUROD2Q15784 382 aa20.18■□□□□ 0.82
UBXN1-217ENST00000534176 NCBP3Q53F19 620 aaKnown RBP20.18■□□□□ 0.82
UBXN1-217ENST00000534176 BCORQ6W2J9 1755 aa20.17■□□□□ 0.82
UBXN1-217ENST00000534176 ERVV-1B6SEH8 477 aa20.17■□□□□ 0.82
UBXN1-217ENST00000534176 CHL1O00533 1208 aa20.17■□□□□ 0.82
UBXN1-217ENST00000534176 HOXB7P09629 217 aa20.17■□□□□ 0.82
UBXN1-217ENST00000534176 A0A0G2JLW4 131 aa20.16■□□□□ 0.82
UBXN1-217ENST00000534176 PRAMEF22A3QJZ6 481 aa20.16■□□□□ 0.82
UBXN1-217ENST00000534176 NPHP1O15259 732 aa20.16■□□□□ 0.82
UBXN1-217ENST00000534176 DPEP1P16444 411 aa20.16■□□□□ 0.82
UBXN1-217ENST00000534176 PDE6BP35913 854 aa20.16■□□□□ 0.82
UBXN1-217ENST00000534176 CFAP44Q96MT7 982 aa20.16■□□□□ 0.82
UBXN1-217ENST00000534176 TRIM35Q9UPQ4 493 aa20.16■□□□□ 0.82
UBXN1-217ENST00000534176 RRP7AQ9Y3A4 280 aaKnown RBP20.16■□□□□ 0.82
UBXN1-217ENST00000534176 KIAA1551Q9HCM1 1747 aa20.16■□□□□ 0.82
UBXN1-217ENST00000534176 GOLGB1Q14789 3259 aaKnown RBP20.15■□□□□ 0.82
UBXN1-217ENST00000534176 NBPF26B4DH59 902 aa20.15■□□□□ 0.82
UBXN1-217ENST00000534176 ST5P78524 1137 aa20.15■□□□□ 0.82
UBXN1-217ENST00000534176 DALRD3Q5D0E6 543 aaKnown RBP20.15■□□□□ 0.82
UBXN1-217ENST00000534176 TBC1D9BQ66K14 1250 aa20.15■□□□□ 0.82
UBXN1-217ENST00000534176 NBPF10Q6P3W6 841 aaKnown RBP20.15■□□□□ 0.82
UBXN1-217ENST00000534176 KIF6Q6ZMV9 814 aa20.15■□□□□ 0.82
UBXN1-217ENST00000534176 NBPF15Q8N660 670 aa20.15■□□□□ 0.82
UBXN1-217ENST00000534176 BRIP1Q9BX63 1249 aa20.15■□□□□ 0.82
UBXN1-217ENST00000534176 BCS1LQ9Y276 419 aa20.15■□□□□ 0.82
UBXN1-217ENST00000534176 CNBD1Q8NA66 436 aa20.14■□□□□ 0.81
UBXN1-217ENST00000534176 AFDNP55196 1824 aaKnown RBP20.13■□□□□ 0.81
UBXN1-217ENST00000534176 N4BP2Q86UW6 1770 aaPredicted RBP20.13■□□□□ 0.81
UBXN1-217ENST00000534176 H0YIN7 160 aa20.13■□□□□ 0.81
UBXN1-217ENST00000534176 APAF1O14727 1248 aa20.13■□□□□ 0.81
UBXN1-217ENST00000534176 BICDL1Q6ZP65 573 aa20.13■□□□□ 0.81
UBXN1-217ENST00000534176 BRCA1P38398 1863 aaKnown RBP20.13■□□□□ 0.81
UBXN1-217ENST00000534176 KCNA3P22001 575 aa20.12■□□□□ 0.81
UBXN1-217ENST00000534176 GNAI1P63096 354 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms