RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 AKT1S1Q96B36 256 aa20.14■□□□□ 0.81
CTTN-215ENST00000533931 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
CTTN-215ENST00000533931 CDCA7LQ96GN5 454 aa20.14■□□□□ 0.81
CTTN-215ENST00000533931 CCDC87Q9NVE4 849 aa20.14■□□□□ 0.81
CTTN-215ENST00000533931 CRKLP46109 303 aaKnown RBP20.13■□□□□ 0.81
CTTN-215ENST00000533931 C8orf58Q8NAV2 365 aa20.13■□□□□ 0.81
CTTN-215ENST00000533931 STK32BQ9NY57 414 aa20.13■□□□□ 0.81
CTTN-215ENST00000533931 KCNQ4P56696 695 aa20.12■□□□□ 0.81
CTTN-215ENST00000533931 EXOSC9Q06265 439 aaKnown RBP20.12■□□□□ 0.81
CTTN-215ENST00000533931 TWISTNBQ3B726 338 aaPredicted RBP20.12■□□□□ 0.81
CTTN-215ENST00000533931 AK7Q96M32 723 aa20.12■□□□□ 0.81
CTTN-215ENST00000533931 USP16Q9Y5T5 823 aa20.12■□□□□ 0.81
CTTN-215ENST00000533931 ADRA2BP18089 450 aa20.11■□□□□ 0.81
CTTN-215ENST00000533931 SLC15A2Q16348 729 aa20.11■□□□□ 0.81
CTTN-215ENST00000533931 KRT24Q2M2I5 525 aa20.11■□□□□ 0.81
CTTN-215ENST00000533931 INTS5Q6P9B9 1019 aaKnown RBP20.11■□□□□ 0.81
CTTN-215ENST00000533931 FLAD1Q8NFF5 587 aa20.11■□□□□ 0.81
CTTN-215ENST00000533931 PRAMEF22A3QJZ6 481 aa20.1■□□□□ 0.81
CTTN-215ENST00000533931 RPS6KA4O75676 772 aa20.1■□□□□ 0.81
CTTN-215ENST00000533931 SSFA2P28290 1259 aa20.1■□□□□ 0.81
CTTN-215ENST00000533931 IL6STP40189 918 aaPredicted RBP20.1■□□□□ 0.81
CTTN-215ENST00000533931 HDGFL1Q5TGJ6 251 aa20.1■□□□□ 0.81
CTTN-215ENST00000533931 QSER1Q2KHR3 1735 aa20.1■□□□□ 0.81
CTTN-215ENST00000533931 ZNF827Q17R98 1081 aa20.09■□□□□ 0.81
CTTN-215ENST00000533931 CCDC30Q5VVM6 783 aa20.09■□□□□ 0.81
CTTN-215ENST00000533931 ANO8Q9HCE9 1232 aaPredicted RBP20.09■□□□□ 0.81
CTTN-215ENST00000533931 VAMP4O75379 141 aa20.08■□□□□ 0.81
CTTN-215ENST00000533931 TSPYL6Q8N831 410 aa20.08■□□□□ 0.81
CTTN-215ENST00000533931 DBF4Q9UBU7 674 aaPredicted RBP20.08■□□□□ 0.81
CTTN-215ENST00000533931 RTCBQ9Y3I0 505 aaKnown RBP20.08■□□□□ 0.81
CTTN-215ENST00000533931 GNPATO15228 680 aa20.07■□□□□ 0.8
CTTN-215ENST00000533931 DDX21Q9NR30 783 aaKnown RBP eCLIP20.07■□□□□ 0.8
CTTN-215ENST00000533931 ZBTB1Q9Y2K1 713 aa20.07■□□□□ 0.8
CTTN-215ENST00000533931 A0A087WZG4 1122 aa20.06■□□□□ 0.8
CTTN-215ENST00000533931 RGL2O15211 777 aa20.06■□□□□ 0.8
CTTN-215ENST00000533931 EIF5P55010 431 aaKnown RBP20.06■□□□□ 0.8
CTTN-215ENST00000533931 YTHDC1Q96MU7 727 aaKnown RBP20.06■□□□□ 0.8
CTTN-215ENST00000533931 TFCP2L1Q9NZI6 479 aa20.06■□□□□ 0.8
CTTN-215ENST00000533931 NBPF26B4DH59 902 aa20.05■□□□□ 0.8
CTTN-215ENST00000533931 ELL2O00472 640 aaPredicted RBP20.05■□□□□ 0.8
CTTN-215ENST00000533931 A1BGP04217 495 aa20.05■□□□□ 0.8
CTTN-215ENST00000533931 EIF2S2P20042 333 aaKnown RBP20.05■□□□□ 0.8
CTTN-215ENST00000533931 NBPF10Q6P3W6 841 aaKnown RBP20.05■□□□□ 0.8
CTTN-215ENST00000533931 NBPF15Q8N660 670 aa20.05■□□□□ 0.8
CTTN-215ENST00000533931 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
CTTN-215ENST00000533931 PDIA6Q15084 440 aa20.04■□□□□ 0.8
CTTN-215ENST00000533931 STK31Q9BXU1 1019 aa20.04■□□□□ 0.8
CTTN-215ENST00000533931 HYPKQ9NX55 129 aa20.04■□□□□ 0.8
CTTN-215ENST00000533931 MYH14Q7Z406 1995 aaKnown RBP20.04■□□□□ 0.8
CTTN-215ENST00000533931 COL15A1P39059 1388 aa20.04■□□□□ 0.8
CTTN-215ENST00000533931 CANXP27824 592 aaKnown RBP20.03■□□□□ 0.8
CTTN-215ENST00000533931 ALDH1L2Q3SY69 923 aa20.03■□□□□ 0.8
CTTN-215ENST00000533931 TRAPPC3LQ5T215 181 aa20.03■□□□□ 0.8
CTTN-215ENST00000533931 LRP10Q7Z4F1 713 aa20.03■□□□□ 0.8
CTTN-215ENST00000533931 NPM2Q86SE8 214 aaKnown RBP20.03■□□□□ 0.8
CTTN-215ENST00000533931 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.8
CTTN-215ENST00000533931 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.02■□□□□ 0.8
CTTN-215ENST00000533931 CHPF2Q9P2E5 772 aa20.02■□□□□ 0.8
CTTN-215ENST00000533931 SLC16A10Q8TF71 515 aa20.01■□□□□ 0.79
CTTN-215ENST00000533931 BRPF1P55201 1214 aaPredicted RBP19.99■□□□□ 0.79
CTTN-215ENST00000533931 AMIGO3Q86WK7 504 aa19.99■□□□□ 0.79
CTTN-215ENST00000533931 ARHGEF1Q92888 912 aaKnown RBP19.99■□□□□ 0.79
CTTN-215ENST00000533931 NARFQ9UHQ1 456 aa19.99■□□□□ 0.79
CTTN-215ENST00000533931 TUBGCP6Q96RT7 1819 aa19.99■□□□□ 0.79
CTTN-215ENST00000533931 RFC4P35249 363 aa19.98■□□□□ 0.79
CTTN-215ENST00000533931 COL23A1Q86Y22 540 aaPredicted RBP19.98■□□□□ 0.79
CTTN-215ENST00000533931 NECTIN2Q92692 538 aa19.98■□□□□ 0.79
CTTN-215ENST00000533931 USP42Q9H9J4 1324 aaKnown RBP19.98■□□□□ 0.79
CTTN-215ENST00000533931 ERVV-1B6SEH8 477 aa19.97■□□□□ 0.79
CTTN-215ENST00000533931 MYL6BP14649 208 aa19.97■□□□□ 0.79
CTTN-215ENST00000533931 PROSER3Q2NL68 480 aa19.97■□□□□ 0.79
CTTN-215ENST00000533931 CASZ1Q86V15 1759 aa19.97■□□□□ 0.79
CTTN-215ENST00000533931 C4AP0C0L4 1744 aa19.96■□□□□ 0.79
CTTN-215ENST00000533931 PHF14O94880 888 aa19.96■□□□□ 0.79
CTTN-215ENST00000533931 SLC4A2P04920 1241 aa19.96■□□□□ 0.79
CTTN-215ENST00000533931 R3HDM1Q15032 1099 aaKnown RBP19.96■□□□□ 0.79
CTTN-215ENST00000533931 KIF6Q6ZMV9 814 aa19.96■□□□□ 0.79
CTTN-215ENST00000533931 DZIP3Q86Y13 1208 aaKnown RBP19.96■□□□□ 0.79
CTTN-215ENST00000533931 SCN7AQ01118 1682 aa19.96■□□□□ 0.79
CTTN-215ENST00000533931 ZPR1O75312 459 aa19.95■□□□□ 0.78
CTTN-215ENST00000533931 DDX58O95786 925 aaKnown RBP19.95■□□□□ 0.78
CTTN-215ENST00000533931 PIP4K2AP48426 406 aaPredicted RBP19.95■□□□□ 0.78
CTTN-215ENST00000533931 RARSP54136 660 aaKnown RBP19.95■□□□□ 0.78
CTTN-215ENST00000533931 CLEC4GQ6UXB4 293 aa19.95■□□□□ 0.78
CTTN-215ENST00000533931 SSH1Q8WYL5 1049 aa19.95■□□□□ 0.78
CTTN-215ENST00000533931 CACNA1FO60840 1977 aa19.95■□□□□ 0.78
CTTN-215ENST00000533931 MAP3K15Q6ZN16 1313 aa19.95■□□□□ 0.78
CTTN-215ENST00000533931 COPS6Q7L5N1 327 aa19.94■□□□□ 0.78
CTTN-215ENST00000533931 XAGE3Q8WTP9 111 aa19.94■□□□□ 0.78
CTTN-215ENST00000533931 ZNF652Q9Y2D9 606 aa19.94■□□□□ 0.78
CTTN-215ENST00000533931 ZNF330Q9Y3S2 320 aaPredicted RBP19.94■□□□□ 0.78
CTTN-215ENST00000533931 CAMTA2O94983 1202 aa19.93■□□□□ 0.78
CTTN-215ENST00000533931 ANXA1P04083 346 aa19.93■□□□□ 0.78
CTTN-215ENST00000533931 MRPL50Q8N5N7 158 aaKnown RBP19.93■□□□□ 0.78
CTTN-215ENST00000533931 PLBD2Q8NHP8 589 aa19.93■□□□□ 0.78
CTTN-215ENST00000533931 SMC4Q9NTJ3 1288 aa19.93■□□□□ 0.78
CTTN-215ENST00000533931 PTPRCP08575 1304 aa19.93■□□□□ 0.78
CTTN-215ENST00000533931 KIF16BQ96L93 1317 aa19.93■□□□□ 0.78
CTTN-215ENST00000533931 BCORQ6W2J9 1755 aa19.93■□□□□ 0.78
CTTN-215ENST00000533931 FLIIQ13045 1269 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms