RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 SCNN1DP51172 638 aa6.98□□□□□ -1.29
BRCA2-205ENST00000533776 MAP7D1Q3KQU3 841 aa6.98□□□□□ -1.29
BRCA2-205ENST00000533776 LINC00114Q6XXX2 140 aa6.98□□□□□ -1.29
BRCA2-205ENST00000533776 PPARGC1BQ86YN6 1023 aaKnown RBP6.98□□□□□ -1.29
BRCA2-205ENST00000533776 INHAP05111 366 aa6.97□□□□□ -1.29
BRCA2-205ENST00000533776 SOX11P35716 441 aa6.97□□□□□ -1.29
BRCA2-205ENST00000533776 CFHR5Q9BXR6 569 aa6.97□□□□□ -1.29
BRCA2-205ENST00000533776 SERTAD1Q9UHV2 236 aa6.97□□□□□ -1.29
BRCA2-205ENST00000533776 PHF24Q9UPV7 400 aa6.97□□□□□ -1.29
BRCA2-205ENST00000533776 HOXB4P17483 251 aaPredicted RBP6.96□□□□□ -1.3
BRCA2-205ENST00000533776 MAP2K3P46734 347 aa6.96□□□□□ -1.3
BRCA2-205ENST00000533776 UBAP2LQ14157 1087 aaKnown RBP6.96□□□□□ -1.3
BRCA2-205ENST00000533776 EFHC2Q5JST6 749 aa6.96□□□□□ -1.3
BRCA2-205ENST00000533776 TBC1D9Q6ZT07 1266 aa6.96□□□□□ -1.3
BRCA2-205ENST00000533776 OXCT2Q9BYC2 517 aaPredicted RBP6.96□□□□□ -1.3
BRCA2-205ENST00000533776 SKIP12755 728 aa6.95□□□□□ -1.3
BRCA2-205ENST00000533776 LBRQ14739 615 aaKnown RBP6.95□□□□□ -1.3
BRCA2-205ENST00000533776 RSPO4Q2I0M5 234 aaPredicted RBP6.95□□□□□ -1.3
BRCA2-205ENST00000533776 ABHD17AQ96GS6 310 aa6.95□□□□□ -1.3
BRCA2-205ENST00000533776 POM121Q96HA1 1249 aa6.95□□□□□ -1.3
BRCA2-205ENST00000533776 TMEM229AB2RXF0 380 aa6.94□□□□□ -1.3
BRCA2-205ENST00000533776 SMTNP53814 917 aa6.94□□□□□ -1.3
BRCA2-205ENST00000533776 C1orf229Q6ZS94 237 aaPredicted RBP6.94□□□□□ -1.3
BRCA2-205ENST00000533776 AIDAQ96BJ3 306 aa6.94□□□□□ -1.3
BRCA2-205ENST00000533776 ARID1BQ8NFD5 2236 aaPredicted RBP6.94□□□□□ -1.3
BRCA2-205ENST00000533776 EML3Q32P44 896 aa6.93□□□□□ -1.3
BRCA2-205ENST00000533776 NKAPLQ5M9Q1 402 aa6.93□□□□□ -1.3
BRCA2-205ENST00000533776 WWC1Q8IX03 1113 aa6.93□□□□□ -1.3
BRCA2-205ENST00000533776 KLRG1Q96E93 195 aa6.93□□□□□ -1.3
BRCA2-205ENST00000533776 NIFKQ9BYG3 293 aaKnown RBP6.93□□□□□ -1.3
BRCA2-205ENST00000533776 CRISPLD1Q9H336 500 aa6.93□□□□□ -1.3
BRCA2-205ENST00000533776 ATXN7L1Q9ULK2 861 aaPredicted RBP6.93□□□□□ -1.3
BRCA2-205ENST00000533776 BNIP3LO60238 219 aa6.92□□□□□ -1.3
BRCA2-205ENST00000533776 BMP4P12644 408 aa6.92□□□□□ -1.3
BRCA2-205ENST00000533776 ATP4AP20648 1035 aa6.92□□□□□ -1.3
BRCA2-205ENST00000533776 FGFR3P22607 806 aa6.92□□□□□ -1.3
BRCA2-205ENST00000533776 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
BRCA2-205ENST00000533776 ALG2Q9H553 416 aa6.92□□□□□ -1.3
BRCA2-205ENST00000533776 RRAGCQ9HB90 399 aa6.92□□□□□ -1.3
BRCA2-205ENST00000533776 USP3Q9Y6I4 520 aa6.92□□□□□ -1.3
BRCA2-205ENST00000533776 RAD21O60216 631 aa6.91□□□□□ -1.3
BRCA2-205ENST00000533776 GTF2IP78347 998 aa6.91□□□□□ -1.3
BRCA2-205ENST00000533776 CTBSQ01459 385 aa6.91□□□□□ -1.3
BRCA2-205ENST00000533776 PSME1Q06323 249 aa6.91□□□□□ -1.3
BRCA2-205ENST00000533776 NDFIP2Q9NV92 336 aa6.91□□□□□ -1.3
BRCA2-205ENST00000533776 CABP1Q9NZU7 370 aa6.91□□□□□ -1.3
BRCA2-205ENST00000533776 NOD1Q9Y239 953 aa6.91□□□□□ -1.3
BRCA2-205ENST00000533776 PCDHGA11Q9Y5H2 935 aa6.91□□□□□ -1.3
BRCA2-205ENST00000533776 A6NJY4 79 aa6.9□□□□□ -1.3
BRCA2-205ENST00000533776 C2CD2LO14523 706 aa6.9□□□□□ -1.3
BRCA2-205ENST00000533776 YBX3P16989 372 aaKnown RBP eCLIP6.9□□□□□ -1.3
BRCA2-205ENST00000533776 NCOA4Q13772 614 aa6.9□□□□□ -1.3
BRCA2-205ENST00000533776 MTFR1Q15390 333 aa6.9□□□□□ -1.3
BRCA2-205ENST00000533776 NBPF1Q3BBV0 1214 aa6.9□□□□□ -1.3
BRCA2-205ENST00000533776 DEPDC4Q8N2C3 294 aa6.9□□□□□ -1.3
BRCA2-205ENST00000533776 SLC4A9Q96Q91 983 aa6.9□□□□□ -1.3
BRCA2-205ENST00000533776 ZCCHC2Q9C0B9 1178 aaKnown RBP6.9□□□□□ -1.3
BRCA2-205ENST00000533776 DNAAF2Q9NVR5 837 aaKnown RBP6.9□□□□□ -1.3
BRCA2-205ENST00000533776 GDF2Q9UK05 429 aaPredicted RBP6.9□□□□□ -1.3
BRCA2-205ENST00000533776 POM121CA8CG34 1229 aa6.89□□□□□ -1.31
BRCA2-205ENST00000533776 UBTFP17480 764 aaKnown RBP6.89□□□□□ -1.31
BRCA2-205ENST00000533776 ARSJQ5FYB0 599 aaPredicted RBP6.89□□□□□ -1.31
BRCA2-205ENST00000533776 FIGNL1Q6PIW4 674 aa6.89□□□□□ -1.31
BRCA2-205ENST00000533776 GOLGA6L1Q8N7Z2 621 aa6.89□□□□□ -1.31
BRCA2-205ENST00000533776 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.89□□□□□ -1.31
BRCA2-205ENST00000533776 C1orf216Q8TAB5 229 aa6.89□□□□□ -1.31
BRCA2-205ENST00000533776 EDARADDQ8WWZ3 215 aa6.89□□□□□ -1.31
BRCA2-205ENST00000533776 IQSEC3Q9UPP2 1182 aaPredicted RBP6.89□□□□□ -1.31
BRCA2-205ENST00000533776 PARP3Q9Y6F1 533 aa6.89□□□□□ -1.31
BRCA2-205ENST00000533776 A0A1W2PNR3 127 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 DCDC2BA2VCK2 349 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 USP17L5A8MUK1 530 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 CDK2AP1O14519 115 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 GNB5O14775 395 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 ATXN7O15265 892 aaPredicted RBP6.88□□□□□ -1.31
BRCA2-205ENST00000533776 TATP17735 454 aaPredicted RBP6.88□□□□□ -1.31
BRCA2-205ENST00000533776 GATA4P43694 442 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 NLRP8Q86W28 1048 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 ZNF295-AS1Q8N0V1 137 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 NFATC2IPQ8NCF5 419 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 ZNF358Q9NW07 568 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 GGA1Q9UJY5 639 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 PCDHGC4Q9Y5F7 938 aa6.88□□□□□ -1.31
BRCA2-205ENST00000533776 BACH1O14867 736 aa6.87□□□□□ -1.31
BRCA2-205ENST00000533776 AMPD1P23109 780 aa6.87□□□□□ -1.31
BRCA2-205ENST00000533776 SLCO4C1Q6ZQN7 724 aa6.87□□□□□ -1.31
BRCA2-205ENST00000533776 ADAMTS19Q8TE59 1207 aa6.87□□□□□ -1.31
BRCA2-205ENST00000533776 GJA3Q9Y6H8 435 aa6.87□□□□□ -1.31
BRCA2-205ENST00000533776 PIK3R2O00459 728 aa6.86□□□□□ -1.31
BRCA2-205ENST00000533776 KHNYNO15037 678 aaKnown RBP6.86□□□□□ -1.31
BRCA2-205ENST00000533776 LZTS3O60299 673 aaPredicted RBP6.86□□□□□ -1.31
BRCA2-205ENST00000533776 CD33P20138 364 aa6.86□□□□□ -1.31
BRCA2-205ENST00000533776 FLIIQ13045 1269 aa6.86□□□□□ -1.31
BRCA2-205ENST00000533776 LRP8Q14114 963 aa6.86□□□□□ -1.31
BRCA2-205ENST00000533776 BICDL1Q6ZP65 573 aa6.86□□□□□ -1.31
BRCA2-205ENST00000533776 ZIC5Q96T25 663 aa6.86□□□□□ -1.31
BRCA2-205ENST00000533776 ZDHHC3Q9NYG2 299 aa6.86□□□□□ -1.31
BRCA2-205ENST00000533776 NEURL1BA8MQ27 555 aa6.85□□□□□ -1.31
BRCA2-205ENST00000533776 DYRK3O43781 588 aa6.85□□□□□ -1.31
BRCA2-205ENST00000533776 MAPTP10636 758 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms