RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 SNRPA1P09661 255 aaKnown RBP20.8■□□□□ 0.92
TSKU-204ENST00000533752 NLGN1Q8N2Q7 840 aa20.79■□□□□ 0.92
TSKU-204ENST00000533752 THUMPD2Q9BTF0 503 aaKnown RBP20.79■□□□□ 0.92
TSKU-204ENST00000533752 MRS2Q9HD23 443 aa20.79■□□□□ 0.92
TSKU-204ENST00000533752 ZBTB1Q9Y2K1 713 aa20.79■□□□□ 0.92
TSKU-204ENST00000533752 COL15A1P39059 1388 aa20.79■□□□□ 0.92
TSKU-204ENST00000533752 KDM3BQ7LBC6 1761 aa20.79■□□□□ 0.92
TSKU-204ENST00000533752 SYT17Q9BSW7 474 aa20.78■□□□□ 0.92
TSKU-204ENST00000533752 BABAM1Q9NWV8 329 aa20.78■□□□□ 0.92
TSKU-204ENST00000533752 RRP7AQ9Y3A4 280 aaKnown RBP20.78■□□□□ 0.92
TSKU-204ENST00000533752 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
TSKU-204ENST00000533752 A0A087WZG4 1122 aa20.76■□□□□ 0.91
TSKU-204ENST00000533752 DCAF8L1A6NGE4 600 aa20.76■□□□□ 0.91
TSKU-204ENST00000533752 NEUROD2Q15784 382 aa20.76■□□□□ 0.91
TSKU-204ENST00000533752 ZPR1O75312 459 aa20.75■□□□□ 0.91
TSKU-204ENST00000533752 GYS1P13807 737 aa20.75■□□□□ 0.91
TSKU-204ENST00000533752 CANXP27824 592 aaKnown RBP20.75■□□□□ 0.91
TSKU-204ENST00000533752 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
TSKU-204ENST00000533752 NPM2Q86SE8 214 aaKnown RBP20.75■□□□□ 0.91
TSKU-204ENST00000533752 KLHL34Q8N239 644 aa20.75■□□□□ 0.91
TSKU-204ENST00000533752 MIS18AQ9NYP9 233 aa20.75■□□□□ 0.91
TSKU-204ENST00000533752 TSPYL4Q9UJ04 414 aa20.75■□□□□ 0.91
TSKU-204ENST00000533752 IL6STP40189 918 aaPredicted RBP20.74■□□□□ 0.91
TSKU-204ENST00000533752 LAMB4A4D0S4 1761 aa20.73■□□□□ 0.91
TSKU-204ENST00000533752 MMP10P09238 476 aa20.73■□□□□ 0.91
TSKU-204ENST00000533752 EIF5P55010 431 aaKnown RBP20.73■□□□□ 0.91
TSKU-204ENST00000533752 NARFQ9UHQ1 456 aa20.73■□□□□ 0.91
TSKU-204ENST00000533752 TRIM35Q9UPQ4 493 aa20.73■□□□□ 0.91
TSKU-204ENST00000533752 CD2APQ9Y5K6 639 aa20.73■□□□□ 0.91
TSKU-204ENST00000533752 APAF1O14727 1248 aa20.72■□□□□ 0.91
TSKU-204ENST00000533752 EIF4A1P60842 406 aaKnown RBP20.72■□□□□ 0.91
TSKU-204ENST00000533752 CALD1Q05682 793 aaKnown RBP20.72■□□□□ 0.91
TSKU-204ENST00000533752 SRP68Q9UHB9 627 aaKnown RBP20.72■□□□□ 0.91
TSKU-204ENST00000533752 USP16Q9Y5T5 823 aa20.71■□□□□ 0.91
TSKU-204ENST00000533752 GIGYF1O75420 1035 aaPredicted RBP20.7■□□□□ 0.9
TSKU-204ENST00000533752 A1BGP04217 495 aa20.7■□□□□ 0.9
TSKU-204ENST00000533752 PARP3Q9Y6F1 533 aa20.7■□□□□ 0.9
TSKU-204ENST00000533752 PRAMEF22A3QJZ6 481 aa20.69■□□□□ 0.9
TSKU-204ENST00000533752 USPL1Q5W0Q7 1092 aa20.69■□□□□ 0.9
TSKU-204ENST00000533752 ZNF330Q9Y3S2 320 aaPredicted RBP20.69■□□□□ 0.9
TSKU-204ENST00000533752 FKBP8Q14318 412 aa20.68■□□□□ 0.9
TSKU-204ENST00000533752 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
TSKU-204ENST00000533752 CHL1O00533 1208 aa20.67■□□□□ 0.9
TSKU-204ENST00000533752 CFAP44Q96MT7 982 aa20.66■□□□□ 0.9
TSKU-204ENST00000533752 ERBB4Q15303 1308 aa20.66■□□□□ 0.9
TSKU-204ENST00000533752 C10orf71Q711Q0 1435 aa20.66■□□□□ 0.9
TSKU-204ENST00000533752 NCBP3Q53F19 620 aaKnown RBP20.65■□□□□ 0.9
TSKU-204ENST00000533752 NLGN2Q8NFZ4 835 aa20.65■□□□□ 0.9
TSKU-204ENST00000533752 CCDC27Q2M243 656 aa20.64■□□□□ 0.89
TSKU-204ENST00000533752 DZIP3Q86Y13 1208 aaKnown RBP20.64■□□□□ 0.89
TSKU-204ENST00000533752 IFT57Q9NWB7 429 aa20.64■□□□□ 0.89
TSKU-204ENST00000533752 LAS1LQ9Y4W2 734 aaKnown RBP20.64■□□□□ 0.89
TSKU-204ENST00000533752 RGL2O15211 777 aa20.63■□□□□ 0.89
TSKU-204ENST00000533752 BCL2L12Q9HB09 334 aa20.63■□□□□ 0.89
TSKU-204ENST00000533752 NBPF26B4DH59 902 aa20.62■□□□□ 0.89
TSKU-204ENST00000533752 POLRMTO00411 1230 aaKnown RBP20.62■□□□□ 0.89
TSKU-204ENST00000533752 TM4SF1P30408 202 aa20.62■□□□□ 0.89
TSKU-204ENST00000533752 GNAI1P63096 354 aa20.62■□□□□ 0.89
TSKU-204ENST00000533752 DDR1Q08345 913 aa20.62■□□□□ 0.89
TSKU-204ENST00000533752 NFIXQ14938 502 aa20.62■□□□□ 0.89
TSKU-204ENST00000533752 NBPF10Q6P3W6 841 aaKnown RBP20.62■□□□□ 0.89
TSKU-204ENST00000533752 NBPF15Q8N660 670 aa20.62■□□□□ 0.89
TSKU-204ENST00000533752 TBC1D2BQ9UPU7 963 aa20.62■□□□□ 0.89
TSKU-204ENST00000533752 ZNF652Q9Y2D9 606 aa20.62■□□□□ 0.89
TSKU-204ENST00000533752 KIF13BQ9NQT8 1826 aa20.62■□□□□ 0.89
TSKU-204ENST00000533752 BCORQ6W2J9 1755 aa20.62■□□□□ 0.89
TSKU-204ENST00000533752 CAMTA2O94983 1202 aa20.61■□□□□ 0.89
TSKU-204ENST00000533752 HOXB7P09629 217 aa20.61■□□□□ 0.89
TSKU-204ENST00000533752 PIP4K2AP48426 406 aaPredicted RBP20.61■□□□□ 0.89
TSKU-204ENST00000533752 ZNF853P0CG23 659 aa20.6■□□□□ 0.89
TSKU-204ENST00000533752 TGFB2P61812 414 aa20.6■□□□□ 0.89
TSKU-204ENST00000533752 CLEC4GQ6UXB4 293 aa20.6■□□□□ 0.89
TSKU-204ENST00000533752 CARMIL3Q8ND23 1372 aa20.59■□□□□ 0.89
TSKU-204ENST00000533752 GPR162Q16538 588 aa20.59■□□□□ 0.89
TSKU-204ENST00000533752 MBIPQ9NS73 344 aa20.59■□□□□ 0.89
TSKU-204ENST00000533752 FAM9BQ8IZU0 186 aa20.58■□□□□ 0.89
TSKU-204ENST00000533752 NGEFQ8N5V2 710 aa20.58■□□□□ 0.89
TSKU-204ENST00000533752 PXDNLA1KZ92 1463 aa20.57■□□□□ 0.88
TSKU-204ENST00000533752 TBC1D9BQ66K14 1250 aa20.57■□□□□ 0.88
TSKU-204ENST00000533752 KIF6Q6ZMV9 814 aa20.57■□□□□ 0.88
TSKU-204ENST00000533752 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
TSKU-204ENST00000533752 NRXN2Q9P2S2 1712 aa20.57■□□□□ 0.88
TSKU-204ENST00000533752 SERPINB2P05120 415 aa20.56■□□□□ 0.88
TSKU-204ENST00000533752 EIF2S2P20042 333 aaKnown RBP20.56■□□□□ 0.88
TSKU-204ENST00000533752 WWC1Q8IX03 1113 aa20.56■□□□□ 0.88
TSKU-204ENST00000533752 SETDB2Q96T68 719 aa20.56■□□□□ 0.88
TSKU-204ENST00000533752 IL16Q14005 1332 aa20.55■□□□□ 0.88
TSKU-204ENST00000533752 CCER2I3L3R5 266 aa20.55■□□□□ 0.88
TSKU-204ENST00000533752 GRIN3BO60391 1043 aa20.55■□□□□ 0.88
TSKU-204ENST00000533752 MYL6BP14649 208 aa20.55■□□□□ 0.88
TSKU-204ENST00000533752 BICDL1Q6ZP65 573 aa20.55■□□□□ 0.88
TSKU-204ENST00000533752 ERVV-1B6SEH8 477 aa20.54■□□□□ 0.88
TSKU-204ENST00000533752 CHMP4AQ9BY43 222 aa20.54■□□□□ 0.88
TSKU-204ENST00000533752 MAP3K15Q6ZN16 1313 aa20.53■□□□□ 0.88
TSKU-204ENST00000533752 KRT24Q2M2I5 525 aa20.53■□□□□ 0.88
TSKU-204ENST00000533752 HDGFL1Q5TGJ6 251 aa20.53■□□□□ 0.88
TSKU-204ENST00000533752 DUSP27Q5VZP5 1158 aa20.53■□□□□ 0.88
TSKU-204ENST00000533752 AFDNP55196 1824 aaKnown RBP20.53■□□□□ 0.88
TSKU-204ENST00000533752 KIAA1551Q9HCM1 1747 aa20.53■□□□□ 0.88
TSKU-204ENST00000533752 PDIA6Q15084 440 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms