RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 CCDC87Q9NVE4 849 aa21.64■■□□□ 1.05
RDX-214ENST00000533678 RUNDC1Q96C34 613 aa21.63■■□□□ 1.05
RDX-214ENST00000533678 LMOD3Q0VAK6 560 aa21.62■■□□□ 1.05
RDX-214ENST00000533678 MSL1Q68DK7 614 aa21.62■■□□□ 1.05
RDX-214ENST00000533678 SMIM5Q71RC9 77 aa21.62■■□□□ 1.05
RDX-214ENST00000533678 C4AP0C0L4 1744 aa21.61■■□□□ 1.05
RDX-214ENST00000533678 ANP32CO43423 234 aa21.61■■□□□ 1.05
RDX-214ENST00000533678 NLGN1Q8N2Q7 840 aa21.61■■□□□ 1.05
RDX-214ENST00000533678 ADAMTS8Q9UP79 889 aa21.61■■□□□ 1.05
RDX-214ENST00000533678 TMPOP42166 694 aaKnown RBP21.6■■□□□ 1.05
RDX-214ENST00000533678 RIPK4P57078 832 aa21.6■■□□□ 1.05
RDX-214ENST00000533678 SOS1Q07889 1333 aaPredicted RBP21.58■■□□□ 1.05
RDX-214ENST00000533678 KCNQ3O43525 872 aa21.58■■□□□ 1.05
RDX-214ENST00000533678 KDM3BQ7LBC6 1761 aa21.57■■□□□ 1.04
RDX-214ENST00000533678 SNRPA1P09661 255 aaKnown RBP21.57■■□□□ 1.04
RDX-214ENST00000533678 CCDC146Q8IYE0 955 aa21.57■■□□□ 1.04
RDX-214ENST00000533678 NLGN2Q8NFZ4 835 aa21.57■■□□□ 1.04
RDX-214ENST00000533678 GYS1P13807 737 aa21.56■■□□□ 1.04
RDX-214ENST00000533678 BABAM1Q9NWV8 329 aa21.56■■□□□ 1.04
RDX-214ENST00000533678 ZBTB1Q9Y2K1 713 aa21.56■■□□□ 1.04
RDX-214ENST00000533678 CD2APQ9Y5K6 639 aa21.56■■□□□ 1.04
RDX-214ENST00000533678 USP42Q9H9J4 1324 aaKnown RBP21.55■■□□□ 1.04
RDX-214ENST00000533678 A0A087WZG4 1122 aa21.55■■□□□ 1.04
RDX-214ENST00000533678 ZPR1O75312 459 aa21.54■■□□□ 1.04
RDX-214ENST00000533678 COL15A1P39059 1388 aa21.53■■□□□ 1.04
RDX-214ENST00000533678 MMP10P09238 476 aa21.53■■□□□ 1.04
RDX-214ENST00000533678 CANXP27824 592 aaKnown RBP21.53■■□□□ 1.04
RDX-214ENST00000533678 IL6STP40189 918 aaPredicted RBP21.53■■□□□ 1.04
RDX-214ENST00000533678 EIF5P55010 431 aaKnown RBP21.53■■□□□ 1.04
RDX-214ENST00000533678 THUMPD2Q9BTF0 503 aaKnown RBP21.53■■□□□ 1.04
RDX-214ENST00000533678 NARFQ9UHQ1 456 aa21.53■■□□□ 1.04
RDX-214ENST00000533678 CEP350Q5VT06 3117 aa21.52■■□□□ 1.04
RDX-214ENST00000533678 MIS18AQ9NYP9 233 aa21.52■■□□□ 1.04
RDX-214ENST00000533678 NPM2Q86SE8 214 aaKnown RBP21.51■■□□□ 1.03
RDX-214ENST00000533678 USP16Q9Y5T5 823 aa21.51■■□□□ 1.03
RDX-214ENST00000533678 ATP10DQ9P241 1426 aa21.5■■□□□ 1.03
RDX-214ENST00000533678 YBX3P16989 372 aaKnown RBP eCLIP21.5■■□□□ 1.03
RDX-214ENST00000533678 NEUROD2Q15784 382 aa21.5■■□□□ 1.03
RDX-214ENST00000533678 IFFO2Q5TF58 517 aa21.5■■□□□ 1.03
RDX-214ENST00000533678 SRP68Q9UHB9 627 aaKnown RBP21.5■■□□□ 1.03
RDX-214ENST00000533678 RRP7AQ9Y3A4 280 aaKnown RBP21.5■■□□□ 1.03
RDX-214ENST00000533678 LAMB4A4D0S4 1761 aa21.5■■□□□ 1.03
RDX-214ENST00000533678 EIF4A1P60842 406 aaKnown RBP21.49■■□□□ 1.03
RDX-214ENST00000533678 USPL1Q5W0Q7 1092 aa21.49■■□□□ 1.03
RDX-214ENST00000533678 TRIM35Q9UPQ4 493 aa21.49■■□□□ 1.03
RDX-214ENST00000533678 PARP3Q9Y6F1 533 aa21.49■■□□□ 1.03
RDX-214ENST00000533678 KIF13BQ9NQT8 1826 aa21.48■■□□□ 1.03
RDX-214ENST00000533678 A1BGP04217 495 aa21.48■■□□□ 1.03
RDX-214ENST00000533678 FKBP8Q14318 412 aa21.48■■□□□ 1.03
RDX-214ENST00000533678 MRS2Q9HD23 443 aa21.48■■□□□ 1.03
RDX-214ENST00000533678 TSPYL4Q9UJ04 414 aa21.48■■□□□ 1.03
RDX-214ENST00000533678 GRIN3BO60391 1043 aa21.47■■□□□ 1.03
RDX-214ENST00000533678 CCDC184Q52MB2 194 aa21.47■■□□□ 1.03
RDX-214ENST00000533678 PRAMEF22A3QJZ6 481 aa21.46■■□□□ 1.03
RDX-214ENST00000533678 TM4SF1P30408 202 aa21.46■■□□□ 1.03
RDX-214ENST00000533678 APAF1O14727 1248 aa21.45■■□□□ 1.02
RDX-214ENST00000533678 CALD1Q05682 793 aaKnown RBP21.44■■□□□ 1.02
RDX-214ENST00000533678 CHL1O00533 1208 aa21.43■■□□□ 1.02
RDX-214ENST00000533678 TGFB2P61812 414 aa21.43■■□□□ 1.02
RDX-214ENST00000533678 BCL2L12Q9HB09 334 aa21.43■■□□□ 1.02
RDX-214ENST00000533678 ZNF330Q9Y3S2 320 aaPredicted RBP21.43■■□□□ 1.02
RDX-214ENST00000533678 ADCY9O60503 1353 aa21.43■■□□□ 1.02
RDX-214ENST00000533678 SCN7AQ01118 1682 aa21.43■■□□□ 1.02
RDX-214ENST00000533678 RGL2O15211 777 aa21.42■■□□□ 1.02
RDX-214ENST00000533678 C10orf71Q711Q0 1435 aa21.42■■□□□ 1.02
RDX-214ENST00000533678 TBC1D2BQ9UPU7 963 aa21.42■■□□□ 1.02
RDX-214ENST00000533678 POLRMTO00411 1230 aaKnown RBP21.41■■□□□ 1.02
RDX-214ENST00000533678 DDR1Q08345 913 aa21.41■■□□□ 1.02
RDX-214ENST00000533678 NCBP3Q53F19 620 aaKnown RBP21.41■■□□□ 1.02
RDX-214ENST00000533678 DIEXFQ68CQ4 756 aaKnown RBP21.41■■□□□ 1.02
RDX-214ENST00000533678 DZIP3Q86Y13 1208 aaKnown RBP21.41■■□□□ 1.02
RDX-214ENST00000533678 BCORQ6W2J9 1755 aa21.41■■□□□ 1.02
RDX-214ENST00000533678 ERBB4Q15303 1308 aa21.4■■□□□ 1.02
RDX-214ENST00000533678 NBPF26B4DH59 902 aa21.4■■□□□ 1.02
RDX-214ENST00000533678 NFIXQ14938 502 aa21.4■■□□□ 1.02
RDX-214ENST00000533678 NBPF10Q6P3W6 841 aaKnown RBP21.4■■□□□ 1.02
RDX-214ENST00000533678 NBPF15Q8N660 670 aa21.4■■□□□ 1.02
RDX-214ENST00000533678 CFAP44Q96MT7 982 aa21.4■■□□□ 1.02
RDX-214ENST00000533678 AFDNP55196 1824 aaKnown RBP21.39■■□□□ 1.02
RDX-214ENST00000533678 CAMTA2O94983 1202 aa21.39■■□□□ 1.01
RDX-214ENST00000533678 CLEC4GQ6UXB4 293 aa21.39■■□□□ 1.01
RDX-214ENST00000533678 NRXN2Q9P2S2 1712 aa21.38■■□□□ 1.01
RDX-214ENST00000533678 GPBP1L1Q9HC44 474 aaPredicted RBP21.38■■□□□ 1.01
RDX-214ENST00000533678 ZNF652Q9Y2D9 606 aa21.38■■□□□ 1.01
RDX-214ENST00000533678 LAS1LQ9Y4W2 734 aaKnown RBP21.38■■□□□ 1.01
RDX-214ENST00000533678 PIP4K2AP48426 406 aaPredicted RBP21.37■■□□□ 1.01
RDX-214ENST00000533678 CCDC27Q2M243 656 aa21.37■■□□□ 1.01
RDX-214ENST00000533678 IFT57Q9NWB7 429 aa21.37■■□□□ 1.01
RDX-214ENST00000533678 KIAA1551Q9HCM1 1747 aa21.37■■□□□ 1.01
RDX-214ENST00000533678 SERPINB2P05120 415 aa21.36■■□□□ 1.01
RDX-214ENST00000533678 GNAI1P63096 354 aa21.36■■□□□ 1.01
RDX-214ENST00000533678 N4BP2Q86UW6 1770 aaPredicted RBP21.36■■□□□ 1.01
RDX-214ENST00000533678 PXDNLA1KZ92 1463 aa21.35■■□□□ 1.01
RDX-214ENST00000533678 HOXB7P09629 217 aa21.35■■□□□ 1.01
RDX-214ENST00000533678 ZNF853P0CG23 659 aa21.35■■□□□ 1.01
RDX-214ENST00000533678 TBC1D9BQ66K14 1250 aa21.35■■□□□ 1.01
RDX-214ENST00000533678 SETDB2Q96T68 719 aa21.35■■□□□ 1.01
RDX-214ENST00000533678 ZNF526Q8TF50 670 aaPredicted RBP21.34■■□□□ 1.01
RDX-214ENST00000533678 CARMIL3Q8ND23 1372 aa21.34■■□□□ 1.01
RDX-214ENST00000533678 ERVV-1B6SEH8 477 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms