RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 CICQ96RK0 1608 aaPredicted RBP15.34■□□□□ 0.05
COMMD9-208ENST00000533643 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.04
COMMD9-208ENST00000533643 CRKLP46109 303 aaKnown RBP15.33■□□□□ 0.04
COMMD9-208ENST00000533643 CCDC30Q5VVM6 783 aa15.33■□□□□ 0.04
COMMD9-208ENST00000533643 INTS5Q6P9B9 1019 aaKnown RBP15.33■□□□□ 0.04
COMMD9-208ENST00000533643 CHMP4AQ9BY43 222 aa15.33■□□□□ 0.04
COMMD9-208ENST00000533643 CCDC87Q9NVE4 849 aa15.33■□□□□ 0.04
COMMD9-208ENST00000533643 RGPD3A6NKT7 1758 aaPredicted RBP15.33■□□□□ 0.04
COMMD9-208ENST00000533643 RGPD4Q7Z3J3 1758 aa15.33■□□□□ 0.04
COMMD9-208ENST00000533643 NBPF26B4DH59 902 aa15.32■□□□□ 0.04
COMMD9-208ENST00000533643 RARSP54136 660 aaKnown RBP15.32■□□□□ 0.04
COMMD9-208ENST00000533643 PDIA6Q15084 440 aa15.32■□□□□ 0.04
COMMD9-208ENST00000533643 RC3H1Q5TC82 1133 aaKnown RBP15.32■□□□□ 0.04
COMMD9-208ENST00000533643 NBPF14Q5TI25 921 aa15.32■□□□□ 0.04
COMMD9-208ENST00000533643 NBPF10Q6P3W6 841 aaKnown RBP15.32■□□□□ 0.04
COMMD9-208ENST00000533643 NBPF15Q8N660 670 aa15.32■□□□□ 0.04
COMMD9-208ENST00000533643 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
COMMD9-208ENST00000533643 ZNF428Q96B54 188 aa15.32■□□□□ 0.04
COMMD9-208ENST00000533643 CHPF2Q9P2E5 772 aa15.32■□□□□ 0.04
COMMD9-208ENST00000533643 PIP4K2AP48426 406 aaPredicted RBP15.31■□□□□ 0.04
COMMD9-208ENST00000533643 PROSER3Q2NL68 480 aa15.31■□□□□ 0.04
COMMD9-208ENST00000533643 ALDH1L2Q3SY69 923 aa15.31■□□□□ 0.04
COMMD9-208ENST00000533643 ZBTB1Q9Y2K1 713 aa15.31■□□□□ 0.04
COMMD9-208ENST00000533643 ERBB4Q15303 1308 aa15.31■□□□□ 0.04
COMMD9-208ENST00000533643 CNTNAP4Q9C0A0 1308 aa15.31■□□□□ 0.04
COMMD9-208ENST00000533643 LAMB4A4D0S4 1761 aa15.3■□□□□ 0.04
COMMD9-208ENST00000533643 ANXA1P04083 346 aa15.3■□□□□ 0.04
COMMD9-208ENST00000533643 COL5A3P25940 1745 aaPredicted RBP15.3■□□□□ 0.04
COMMD9-208ENST00000533643 HMGB2P26583 209 aaKnown RBP15.3■□□□□ 0.04
COMMD9-208ENST00000533643 STK31Q9BXU1 1019 aa15.3■□□□□ 0.04
COMMD9-208ENST00000533643 DDX21Q9NR30 783 aaKnown RBP eCLIP15.3■□□□□ 0.04
COMMD9-208ENST00000533643 DBF4Q9UBU7 674 aaPredicted RBP15.3■□□□□ 0.04
COMMD9-208ENST00000533643 RCAN3Q9UKA8 241 aa15.3■□□□□ 0.04
COMMD9-208ENST00000533643 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
COMMD9-208ENST00000533643 CANXP27824 592 aaKnown RBP15.29■□□□□ 0.04
COMMD9-208ENST00000533643 LRP10Q7Z4F1 713 aa15.29■□□□□ 0.04
COMMD9-208ENST00000533643 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
COMMD9-208ENST00000533643 BCL2L13Q9BXK5 485 aa15.29■□□□□ 0.04
COMMD9-208ENST00000533643 BCAR3O75815 825 aa15.28■□□□□ 0.04
COMMD9-208ENST00000533643 MYL6BP14649 208 aa15.28■□□□□ 0.04
COMMD9-208ENST00000533643 ZNF827Q17R98 1081 aa15.28■□□□□ 0.04
COMMD9-208ENST00000533643 AKT1S1Q96B36 256 aa15.28■□□□□ 0.04
COMMD9-208ENST00000533643 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
COMMD9-208ENST00000533643 HYPKQ9NX55 129 aa15.28■□□□□ 0.04
COMMD9-208ENST00000533643 TAF1LQ8IZX4 1826 aa15.28■□□□□ 0.04
COMMD9-208ENST00000533643 C4BP0C0L5 1744 aa15.28■□□□□ 0.04
COMMD9-208ENST00000533643 GNPATO15228 680 aa15.27■□□□□ 0.04
COMMD9-208ENST00000533643 RPS6KA4O75676 772 aa15.27■□□□□ 0.04
COMMD9-208ENST00000533643 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
COMMD9-208ENST00000533643 SMIM5Q71RC9 77 aa15.27■□□□□ 0.04
COMMD9-208ENST00000533643 G2E3Q7L622 706 aa15.27■□□□□ 0.04
COMMD9-208ENST00000533643 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.04
COMMD9-208ENST00000533643 AK7Q96M32 723 aa15.27■□□□□ 0.04
COMMD9-208ENST00000533643 RREB1Q92766 1687 aa15.27■□□□□ 0.03
COMMD9-208ENST00000533643 MYH14Q7Z406 1995 aaKnown RBP15.27■□□□□ 0.03
COMMD9-208ENST00000533643 IL6STP40189 918 aaPredicted RBP15.26■□□□□ 0.03
COMMD9-208ENST00000533643 BRPF1P55201 1214 aaPredicted RBP15.26■□□□□ 0.03
COMMD9-208ENST00000533643 PHAXQ9H814 394 aaKnown RBP15.26■□□□□ 0.03
COMMD9-208ENST00000533643 ANO8Q9HCE9 1232 aaPredicted RBP15.26■□□□□ 0.03
COMMD9-208ENST00000533643 XAGE3Q8WTP9 111 aa15.25■□□□□ 0.03
COMMD9-208ENST00000533643 RTCBQ9Y3I0 505 aaKnown RBP15.25■□□□□ 0.03
COMMD9-208ENST00000533643 NUP188Q5SRE5 1749 aa15.24■□□□□ 0.03
COMMD9-208ENST00000533643 CENPBP07199 599 aaPredicted RBP15.24■□□□□ 0.03
COMMD9-208ENST00000533643 TTLL7Q6ZT98 887 aa15.24■□□□□ 0.03
COMMD9-208ENST00000533643 COPS6Q7L5N1 327 aa15.24■□□□□ 0.03
COMMD9-208ENST00000533643 TFCP2L1Q9NZI6 479 aa15.24■□□□□ 0.03
COMMD9-208ENST00000533643 ZNF330Q9Y3S2 320 aaPredicted RBP15.24■□□□□ 0.03
COMMD9-208ENST00000533643 AIMP1Q12904 312 aaKnown RBP15.23■□□□□ 0.03
COMMD9-208ENST00000533643 FLIIQ13045 1269 aa15.23■□□□□ 0.03
COMMD9-208ENST00000533643 SLC15A2Q16348 729 aa15.23■□□□□ 0.03
COMMD9-208ENST00000533643 STK32BQ9NY57 414 aa15.23■□□□□ 0.03
COMMD9-208ENST00000533643 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
COMMD9-208ENST00000533643 COL15A1P39059 1388 aa15.23■□□□□ 0.03
COMMD9-208ENST00000533643 SSFA2P28290 1259 aa15.22■□□□□ 0.03
COMMD9-208ENST00000533643 TRAPPC3LQ5T215 181 aa15.22■□□□□ 0.03
COMMD9-208ENST00000533643 ARHGEF1Q92888 912 aaKnown RBP15.22■□□□□ 0.03
COMMD9-208ENST00000533643 A0A087WZG4 1122 aa15.21■□□□□ 0.03
COMMD9-208ENST00000533643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.21■□□□□ 0.03
COMMD9-208ENST00000533643 PHF14O94880 888 aa15.21■□□□□ 0.03
COMMD9-208ENST00000533643 ADRA2BP18089 450 aa15.21■□□□□ 0.03
COMMD9-208ENST00000533643 NPM2Q86SE8 214 aaKnown RBP15.21■□□□□ 0.03
COMMD9-208ENST00000533643 ARXQ96QS3 562 aa15.21■□□□□ 0.03
COMMD9-208ENST00000533643 TBC1D2BQ9UPU7 963 aa15.21■□□□□ 0.03
COMMD9-208ENST00000533643 KIF16BQ96L93 1317 aa15.2■□□□□ 0.02
COMMD9-208ENST00000533643 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
COMMD9-208ENST00000533643 ANKRD13DQ6ZTN6 518 aa15.2■□□□□ 0.02
COMMD9-208ENST00000533643 DZIP3Q86Y13 1208 aaKnown RBP15.2■□□□□ 0.02
COMMD9-208ENST00000533643 ARHGAP45Q92619 1136 aa15.2■□□□□ 0.02
COMMD9-208ENST00000533643 FRAT1Q92837 279 aaPredicted RBP15.2■□□□□ 0.02
COMMD9-208ENST00000533643 UBR3Q6ZT12 1888 aa15.2■□□□□ 0.02
COMMD9-208ENST00000533643 PTPRCP08575 1304 aa15.19■□□□□ 0.02
COMMD9-208ENST00000533643 PNPLA7Q6ZV29 1317 aa15.19■□□□□ 0.02
COMMD9-208ENST00000533643 IPO8O15397 1037 aaKnown RBP15.19■□□□□ 0.02
COMMD9-208ENST00000533643 PLIN1O60240 522 aa15.19■□□□□ 0.02
COMMD9-208ENST00000533643 CAMTA2O94983 1202 aa15.19■□□□□ 0.02
COMMD9-208ENST00000533643 DDX58O95786 925 aaKnown RBP15.19■□□□□ 0.02
COMMD9-208ENST00000533643 KIF6Q6ZMV9 814 aa15.19■□□□□ 0.02
COMMD9-208ENST00000533643 COL23A1Q86Y22 540 aaPredicted RBP15.19■□□□□ 0.02
COMMD9-208ENST00000533643 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
COMMD9-208ENST00000533643 MAP3K15Q6ZN16 1313 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms