RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 SMIM5Q71RC9 77 aa16.13■□□□□ 0.17
SF3B2-213ENST00000533421 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
SF3B2-213ENST00000533421 MRS2Q9HD23 443 aa16.13■□□□□ 0.17
SF3B2-213ENST00000533421 DLG5Q8TDM6 1919 aa16.13■□□□□ 0.17
SF3B2-213ENST00000533421 C4AP0C0L4 1744 aa16.13■□□□□ 0.17
SF3B2-213ENST00000533421 USP42Q9H9J4 1324 aaKnown RBP16.13■□□□□ 0.17
SF3B2-213ENST00000533421 A0A087WZG4 1122 aa16.12■□□□□ 0.17
SF3B2-213ENST00000533421 GYS1P13807 737 aa16.12■□□□□ 0.17
SF3B2-213ENST00000533421 NLGN2Q8NFZ4 835 aa16.12■□□□□ 0.17
SF3B2-213ENST00000533421 ADAMTS8Q9UP79 889 aa16.12■□□□□ 0.17
SF3B2-213ENST00000533421 SOS1Q07889 1333 aaPredicted RBP16.12■□□□□ 0.17
SF3B2-213ENST00000533421 COL15A1P39059 1388 aa16.12■□□□□ 0.17
SF3B2-213ENST00000533421 LMOD3Q0VAK6 560 aa16.11■□□□□ 0.17
SF3B2-213ENST00000533421 NFE2L2Q16236 605 aa16.11■□□□□ 0.17
SF3B2-213ENST00000533421 MCM10Q7L590 875 aa16.11■□□□□ 0.17
SF3B2-213ENST00000533421 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
SF3B2-213ENST00000533421 CHD4Q14839 1912 aa16.1■□□□□ 0.17
SF3B2-213ENST00000533421 TAF7Q15545 349 aaPredicted RBP16.1■□□□□ 0.17
SF3B2-213ENST00000533421 PLEKHF1Q96S99 279 aa16.1■□□□□ 0.17
SF3B2-213ENST00000533421 NARFQ9UHQ1 456 aa16.09■□□□□ 0.17
SF3B2-213ENST00000533421 ZBTB1Q9Y2K1 713 aa16.09■□□□□ 0.17
SF3B2-213ENST00000533421 RRP7AQ9Y3A4 280 aaKnown RBP16.09■□□□□ 0.17
SF3B2-213ENST00000533421 SNRPA1P09661 255 aaKnown RBP16.08■□□□□ 0.16
SF3B2-213ENST00000533421 CANXP27824 592 aaKnown RBP16.08■□□□□ 0.16
SF3B2-213ENST00000533421 TGFB2P61812 414 aa16.08■□□□□ 0.16
SF3B2-213ENST00000533421 DCTN1Q14203 1278 aa16.08■□□□□ 0.16
SF3B2-213ENST00000533421 MIER1Q8N108 512 aa16.08■□□□□ 0.16
SF3B2-213ENST00000533421 IL6STP40189 918 aaPredicted RBP16.07■□□□□ 0.16
SF3B2-213ENST00000533421 SRP68Q9UHB9 627 aaKnown RBP16.07■□□□□ 0.16
SF3B2-213ENST00000533421 USPL1Q5W0Q7 1092 aa16.06■□□□□ 0.16
SF3B2-213ENST00000533421 KIF13BQ9NQT8 1826 aa16.05■□□□□ 0.16
SF3B2-213ENST00000533421 C10orf71Q711Q0 1435 aa16.05■□□□□ 0.16
SF3B2-213ENST00000533421 EIF5P55010 431 aaKnown RBP16.05■□□□□ 0.16
SF3B2-213ENST00000533421 FKBP8Q14318 412 aa16.05■□□□□ 0.16
SF3B2-213ENST00000533421 NEUROD2Q15784 382 aa16.05■□□□□ 0.16
SF3B2-213ENST00000533421 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
SF3B2-213ENST00000533421 ZNF330Q9Y3S2 320 aaPredicted RBP16.05■□□□□ 0.16
SF3B2-213ENST00000533421 RIPK4P57078 832 aa16.04■□□□□ 0.16
SF3B2-213ENST00000533421 THUMPD2Q9BTF0 503 aaKnown RBP16.04■□□□□ 0.16
SF3B2-213ENST00000533421 RUNDC1Q96C34 613 aa16.03■□□□□ 0.16
SF3B2-213ENST00000533421 KCNQ3O43525 872 aa16.02■□□□□ 0.16
SF3B2-213ENST00000533421 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.166e-11■□□□□ 9.7
SF3B2-213ENST00000533421 TM4SF1P30408 202 aa16.02■□□□□ 0.16
SF3B2-213ENST00000533421 BABAM1Q9NWV8 329 aa16.02■□□□□ 0.16
SF3B2-213ENST00000533421 POLRMTO00411 1230 aaKnown RBP16.01■□□□□ 0.15
SF3B2-213ENST00000533421 TMPOP42166 694 aaKnown RBP16.01■□□□□ 0.15
SF3B2-213ENST00000533421 ZNF652Q9Y2D9 606 aa16.01■□□□□ 0.15
SF3B2-213ENST00000533421 PXDNLA1KZ92 1463 aa16.01■□□□□ 0.15
SF3B2-213ENST00000533421 SCN7AQ01118 1682 aa16■□□□□ 0.15
SF3B2-213ENST00000533421 APAF1O14727 1248 aa16■□□□□ 0.15
SF3B2-213ENST00000533421 A1BGP04217 495 aa16■□□□□ 0.15
SF3B2-213ENST00000533421 USP16Q9Y5T5 823 aa16■□□□□ 0.15
SF3B2-213ENST00000533421 LAMB4A4D0S4 1761 aa16■□□□□ 0.15
SF3B2-213ENST00000533421 KDM3BQ7LBC6 1761 aa16■□□□□ 0.15
SF3B2-213ENST00000533421 RGL2O15211 777 aa15.99■□□□□ 0.15
SF3B2-213ENST00000533421 NPHP1O15259 732 aa15.99■□□□□ 0.15
SF3B2-213ENST00000533421 DDR1Q08345 913 aa15.99■□□□□ 0.15
SF3B2-213ENST00000533421 NFIXQ14938 502 aa15.99■□□□□ 0.15
SF3B2-213ENST00000533421 DZIP3Q86Y13 1208 aaKnown RBP15.99■□□□□ 0.15
SF3B2-213ENST00000533421 TSPYL4Q9UJ04 414 aa15.99■□□□□ 0.15
SF3B2-213ENST00000533421 GOLGB1Q14789 3259 aaKnown RBP15.98■□□□□ 0.15
SF3B2-213ENST00000533421 A0A0G2JLW4 131 aa15.98■□□□□ 0.15
SF3B2-213ENST00000533421 SERPINB2P05120 415 aa15.98■□□□□ 0.15
SF3B2-213ENST00000533421 CLEC4GQ6UXB4 293 aa15.98■□□□□ 0.15
SF3B2-213ENST00000533421 MIS18AQ9NYP9 233 aa15.98■□□□□ 0.15
SF3B2-213ENST00000533421 PIM2Q9P1W9 311 aa15.98■□□□□ 0.15
SF3B2-213ENST00000533421 PDZRN3Q9UPQ7 1066 aa15.98■□□□□ 0.15
SF3B2-213ENST00000533421 TBC1D2BQ9UPU7 963 aa15.98■□□□□ 0.15
SF3B2-213ENST00000533421 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
SF3B2-213ENST00000533421 CARMIL3Q8ND23 1372 aa15.98■□□□□ 0.15
SF3B2-213ENST00000533421 DPEP1P16444 411 aa15.97■□□□□ 0.15
SF3B2-213ENST00000533421 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
SF3B2-213ENST00000533421 ZNF784Q8NCA9 323 aaPredicted RBP15.97■□□□□ 0.15
SF3B2-213ENST00000533421 SETDB2Q96T68 719 aa15.97■□□□□ 0.15
SF3B2-213ENST00000533421 BCS1LQ9Y276 419 aa15.97■□□□□ 0.15
SF3B2-213ENST00000533421 N4BP2Q86UW6 1770 aaPredicted RBP15.97■□□□□ 0.15
SF3B2-213ENST00000533421 GIGYF1O75420 1035 aaPredicted RBP15.96■□□□□ 0.15
SF3B2-213ENST00000533421 CALD1Q05682 793 aaKnown RBP15.96■□□□□ 0.15
SF3B2-213ENST00000533421 BICDL1Q6ZP65 573 aa15.96■□□□□ 0.15
SF3B2-213ENST00000533421 BCL2L12Q9HB09 334 aa15.96■□□□□ 0.15
SF3B2-213ENST00000533421 NRXN2Q9P2S2 1712 aa15.96■□□□□ 0.15
SF3B2-213ENST00000533421 ERBB4Q15303 1308 aa15.95■□□□□ 0.14
SF3B2-213ENST00000533421 KIAA1551Q9HCM1 1747 aa15.95■□□□□ 0.14
SF3B2-213ENST00000533421 CAMTA2O94983 1202 aa15.95■□□□□ 0.14
SF3B2-213ENST00000533421 DALRD3Q5D0E6 543 aaKnown RBP15.95■□□□□ 0.14
SF3B2-213ENST00000533421 TRIM35Q9UPQ4 493 aa15.95■□□□□ 0.14
SF3B2-213ENST00000533421 AFDNP55196 1824 aaKnown RBP15.95■□□□□ 0.14
SF3B2-213ENST00000533421 BCORQ6W2J9 1755 aa15.95■□□□□ 0.14
SF3B2-213ENST00000533421 PRAMEF22A3QJZ6 481 aa15.94■□□□□ 0.14
SF3B2-213ENST00000533421 PDE6BP35913 854 aa15.94■□□□□ 0.14
SF3B2-213ENST00000533421 ST5P78524 1137 aa15.94■□□□□ 0.14
SF3B2-213ENST00000533421 TBC1D9BQ66K14 1250 aa15.94■□□□□ 0.14
SF3B2-213ENST00000533421 WWC3Q9ULE0 1092 aa15.94■□□□□ 0.14
SF3B2-213ENST00000533421 H0YIN7 160 aa15.93■□□□□ 0.14
SF3B2-213ENST00000533421 CCER2I3L3R5 266 aa15.93■□□□□ 0.14
SF3B2-213ENST00000533421 KIF6Q6ZMV9 814 aa15.93■□□□□ 0.14
SF3B2-213ENST00000533421 CNBD1Q8NA66 436 aa15.93■□□□□ 0.14
SF3B2-213ENST00000533421 BRCA1P38398 1863 aaKnown RBP15.93■□□□□ 0.14
SF3B2-213ENST00000533421 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
SF3B2-213ENST00000533421 ARFGEF1Q9Y6D6 1849 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms