RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 MARCH10Q8NA82 808 aaPredicted RBP17.01■□□□□ 0.31
CDC27-210ENST00000533415 UNC5CLQ8IV45 518 aa17■□□□□ 0.31
CDC27-210ENST00000533415 FMNL2Q96PY5 1086 aa17■□□□□ 0.31
CDC27-210ENST00000533415 NKX1-1Q15270 411 aaPredicted RBP17■□□□□ 0.31
CDC27-210ENST00000533415 CWF19L2Q2TBE0 894 aaKnown RBP17■□□□□ 0.31
CDC27-210ENST00000533415 RWDD1Q9H446 243 aaPredicted RBP17■□□□□ 0.31
CDC27-210ENST00000533415 USP21Q9UK80 565 aa17■□□□□ 0.31
CDC27-210ENST00000533415 MAP3K2Q9Y2U5 619 aa17■□□□□ 0.31
CDC27-210ENST00000533415 RBM19Q9Y4C8 960 aaKnown RBP17■□□□□ 0.31
CDC27-210ENST00000533415 KCNQ2O43526 872 aa16.99■□□□□ 0.31
CDC27-210ENST00000533415 XAGE3Q8WTP9 111 aa16.99■□□□□ 0.31
CDC27-210ENST00000533415 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
CDC27-210ENST00000533415 ADCY9O60503 1353 aa16.99■□□□□ 0.31
CDC27-210ENST00000533415 BCL9LQ86UU0 1499 aa16.99■□□□□ 0.31
CDC27-210ENST00000533415 KCNQ4P56696 695 aa16.99■□□□□ 0.31
CDC27-210ENST00000533415 SLIT2O94813 1529 aa16.99■□□□□ 0.31
CDC27-210ENST00000533415 NRAPQ86VF7 1730 aa16.99■□□□□ 0.31
CDC27-210ENST00000533415 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
CDC27-210ENST00000533415 COPS6Q7L5N1 327 aa16.98■□□□□ 0.31
CDC27-210ENST00000533415 ERVV-2B6SEH9 535 aa16.98■□□□□ 0.31
CDC27-210ENST00000533415 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
CDC27-210ENST00000533415 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
CDC27-210ENST00000533415 MRC1P22897 1456 aa16.97■□□□□ 0.31
CDC27-210ENST00000533415 NBPF26B4DH59 902 aa16.97■□□□□ 0.31
CDC27-210ENST00000533415 NBPF14Q5TI25 921 aa16.97■□□□□ 0.31
CDC27-210ENST00000533415 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
CDC27-210ENST00000533415 NBPF15Q8N660 670 aa16.97■□□□□ 0.31
CDC27-210ENST00000533415 ARXQ96QS3 562 aa16.97■□□□□ 0.31
CDC27-210ENST00000533415 NBPF7P0C2Y1 421 aaPredicted RBP16.96■□□□□ 0.31
CDC27-210ENST00000533415 DNAJC10Q8IXB1 793 aa16.96■□□□□ 0.31
CDC27-210ENST00000533415 SLC4A9Q96Q91 983 aa16.96■□□□□ 0.31
CDC27-210ENST00000533415 PDE4AP27815 886 aa16.96■□□□□ 0.31
CDC27-210ENST00000533415 DNAAF4Q8WXU2 420 aa16.96■□□□□ 0.31
CDC27-210ENST00000533415 LRRFIP2Q9Y608 721 aaKnown RBP16.96■□□□□ 0.31
CDC27-210ENST00000533415 HOXB7P09629 217 aa16.95■□□□□ 0.3
CDC27-210ENST00000533415 USP44Q9H0E7 712 aa16.95■□□□□ 0.3
CDC27-210ENST00000533415 DDX21Q9NR30 783 aaKnown RBP eCLIP16.95■□□□□ 0.3
CDC27-210ENST00000533415 RTL5Q5HYW3 569 aaPredicted RBP16.95■□□□□ 0.3
CDC27-210ENST00000533415 CEP85Q6P2H3 762 aa16.95■□□□□ 0.3
CDC27-210ENST00000533415 TTLL7Q6ZT98 887 aa16.95■□□□□ 0.3
CDC27-210ENST00000533415 ATP5J2-PTCD1G3V325 749 aa16.94■□□□□ 0.3
CDC27-210ENST00000533415 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
CDC27-210ENST00000533415 CCT4P50991 539 aaKnown RBP16.94■□□□□ 0.3
CDC27-210ENST00000533415 AFF2P51816 1311 aa16.94■□□□□ 0.3
CDC27-210ENST00000533415 HDAC1Q13547 482 aaPredicted RBP16.94■□□□□ 0.3
CDC27-210ENST00000533415 BEND3Q5T5X7 828 aa16.94■□□□□ 0.3
CDC27-210ENST00000533415 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
CDC27-210ENST00000533415 GLI3P10071 1580 aa16.94■□□□□ 0.3
CDC27-210ENST00000533415 PNMA6EA0A0J9YXQ4 647 aa16.93■□□□□ 0.3
CDC27-210ENST00000533415 SMIM5Q71RC9 77 aa16.93■□□□□ 0.3
CDC27-210ENST00000533415 RIC3Q7Z5B4 369 aa16.93■□□□□ 0.3
CDC27-210ENST00000533415 ATP10DQ9P241 1426 aa16.93■□□□□ 0.3
CDC27-210ENST00000533415 KCPQ6ZWJ8 1503 aa16.93■□□□□ 0.3
CDC27-210ENST00000533415 LRP10Q7Z4F1 713 aa16.93■□□□□ 0.3
CDC27-210ENST00000533415 SRCIN1Q9C0H9 1055 aa16.93■□□□□ 0.3
CDC27-210ENST00000533415 C16orf71Q8IYS4 520 aaPredicted RBP16.92■□□□□ 0.3
CDC27-210ENST00000533415 MYD88Q99836 296 aa16.92■□□□□ 0.3
CDC27-210ENST00000533415 ZBTB3Q9H5J0 574 aa16.92■□□□□ 0.3
CDC27-210ENST00000533415 TNS2Q63HR2 1409 aa16.92■□□□□ 0.3
CDC27-210ENST00000533415 NPM2Q86SE8 214 aaKnown RBP16.92■□□□□ 0.3
CDC27-210ENST00000533415 FNBP4Q8N3X1 1017 aaPredicted RBP16.91■□□□□ 0.3
CDC27-210ENST00000533415 HYPKQ9NX55 129 aa16.91■□□□□ 0.3
CDC27-210ENST00000533415 VPS72Q15906 364 aa16.91■□□□□ 0.3
CDC27-210ENST00000533415 KSR2Q6VAB6 950 aa16.91■□□□□ 0.3
CDC27-210ENST00000533415 EXOC6BQ9Y2D4 811 aa16.91■□□□□ 0.3
CDC27-210ENST00000533415 OTUD7AQ8TE49 926 aaPredicted RBP16.9■□□□□ 0.3
CDC27-210ENST00000533415 ITGB4P16144 1822 aa16.9■□□□□ 0.3
CDC27-210ENST00000533415 SOS1Q07889 1333 aaPredicted RBP16.9■□□□□ 0.3
CDC27-210ENST00000533415 IGKV5-2P06315 115 aa16.9■□□□□ 0.3
CDC27-210ENST00000533415 SMC5Q8IY18 1101 aa16.89■□□□□ 0.3
CDC27-210ENST00000533415 ANKRD44Q8N8A2 993 aa16.89■□□□□ 0.3
CDC27-210ENST00000533415 GNAI2P04899 355 aa16.89■□□□□ 0.29
CDC27-210ENST00000533415 UBTFL1P0CB47 393 aaPredicted RBP16.89■□□□□ 0.29
CDC27-210ENST00000533415 BCL9O00512 1426 aa16.89■□□□□ 0.29
CDC27-210ENST00000533415 SPATA31A6Q5VVP1 1343 aa16.89■□□□□ 0.29
CDC27-210ENST00000533415 THRAP3Q9Y2W1 955 aaKnown RBP16.88■□□□□ 0.29
CDC27-210ENST00000533415 DOT1LQ8TEK3 1739 aa16.88■□□□□ 0.29
CDC27-210ENST00000533415 AAMPQ13685 434 aa16.88■□□□□ 0.29
CDC27-210ENST00000533415 WNK3Q9BYP7 1800 aa16.88■□□□□ 0.29
CDC27-210ENST00000533415 BARGINQ6ZT62 677 aa16.87■□□□□ 0.29
CDC27-210ENST00000533415 ANKRD13DQ6ZTN6 518 aa16.87■□□□□ 0.29
CDC27-210ENST00000533415 TSHZ3Q63HK5 1081 aa16.87■□□□□ 0.29
CDC27-210ENST00000533415 C9orf78Q9NZ63 289 aaPredicted RBP16.87■□□□□ 0.29
CDC27-210ENST00000533415 CHD1LQ86WJ1 897 aa16.86■□□□□ 0.29
CDC27-210ENST00000533415 NUCB1Q02818 461 aa16.86■□□□□ 0.29
CDC27-210ENST00000533415 ZBTB1Q9Y2K1 713 aa16.86■□□□□ 0.29
CDC27-210ENST00000533415 NWD2Q9ULI1 1742 aa16.85■□□□□ 0.29
CDC27-210ENST00000533415 SEC24BO95487 1268 aa16.85■□□□□ 0.29
CDC27-210ENST00000533415 C8orf34Q49A92 452 aa16.85■□□□□ 0.29
CDC27-210ENST00000533415 PPP1R42Q7Z4L9 355 aa16.85■□□□□ 0.29
CDC27-210ENST00000533415 GJD4Q96KN9 370 aaPredicted RBP16.85■□□□□ 0.29
CDC27-210ENST00000533415 CACNA1FO60840 1977 aa16.85■□□□□ 0.29
CDC27-210ENST00000533415 SUCLG2Q96I99 432 aa16.84■□□□□ 0.29
CDC27-210ENST00000533415 BACH2Q9BYV9 841 aa16.84■□□□□ 0.29
CDC27-210ENST00000533415 DDX58O95786 925 aaKnown RBP16.84■□□□□ 0.29
CDC27-210ENST00000533415 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
CDC27-210ENST00000533415 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
CDC27-210ENST00000533415 PA2G4Q9UQ80 394 aaKnown RBP16.84■□□□□ 0.29
CDC27-210ENST00000533415 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
CDC27-210ENST00000533415 PLEKHG2Q9H7P9 1386 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms