RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 GYS1P13807 737 aa20.27■□□□□ 0.84
CPSF1-210ENST00000532935 TMPOP42166 694 aaKnown RBP20.27■□□□□ 0.84
CPSF1-210ENST00000532935 RIPK4P57078 832 aa20.27■□□□□ 0.84
CPSF1-210ENST00000532935 RUNDC1Q96C34 613 aa20.27■□□□□ 0.84
CPSF1-210ENST00000532935 THUMPD2Q9BTF0 503 aaKnown RBP20.27■□□□□ 0.84
CPSF1-210ENST00000532935 USP42Q9H9J4 1324 aaKnown RBP20.27■□□□□ 0.83
CPSF1-210ENST00000532935 LAMB4A4D0S4 1761 aa20.26■□□□□ 0.83
CPSF1-210ENST00000532935 COL15A1P39059 1388 aa20.26■□□□□ 0.83
CPSF1-210ENST00000532935 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
CPSF1-210ENST00000532935 NLGN1Q8N2Q7 840 aa20.26■□□□□ 0.83
CPSF1-210ENST00000532935 SRP68Q9UHB9 627 aaKnown RBP20.26■□□□□ 0.83
CPSF1-210ENST00000532935 MMP10P09238 476 aa20.25■□□□□ 0.83
CPSF1-210ENST00000532935 CANXP27824 592 aaKnown RBP20.25■□□□□ 0.83
CPSF1-210ENST00000532935 PNISRQ8TF01 805 aaKnown RBP20.25■□□□□ 0.83
CPSF1-210ENST00000532935 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
CPSF1-210ENST00000532935 KIF13BQ9NQT8 1826 aa20.25■□□□□ 0.83
CPSF1-210ENST00000532935 ANP32CO43423 234 aa20.24■□□□□ 0.83
CPSF1-210ENST00000532935 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
CPSF1-210ENST00000532935 NLGN2Q8NFZ4 835 aa20.24■□□□□ 0.83
CPSF1-210ENST00000532935 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
CPSF1-210ENST00000532935 CD2APQ9Y5K6 639 aa20.23■□□□□ 0.83
CPSF1-210ENST00000532935 PRAMEF22A3QJZ6 481 aa20.22■□□□□ 0.83
CPSF1-210ENST00000532935 ZPR1O75312 459 aa20.22■□□□□ 0.83
CPSF1-210ENST00000532935 SNRPA1P09661 255 aaKnown RBP20.22■□□□□ 0.83
CPSF1-210ENST00000532935 FKBP8Q14318 412 aa20.22■□□□□ 0.83
CPSF1-210ENST00000532935 NEUROD2Q15784 382 aa20.22■□□□□ 0.83
CPSF1-210ENST00000532935 CCDC184Q52MB2 194 aa20.22■□□□□ 0.83
CPSF1-210ENST00000532935 USP16Q9Y5T5 823 aa20.22■□□□□ 0.83
CPSF1-210ENST00000532935 A1BGP04217 495 aa20.21■□□□□ 0.83
CPSF1-210ENST00000532935 EIF5P55010 431 aaKnown RBP20.21■□□□□ 0.83
CPSF1-210ENST00000532935 USPL1Q5W0Q7 1092 aa20.21■□□□□ 0.83
CPSF1-210ENST00000532935 NARFQ9UHQ1 456 aa20.21■□□□□ 0.83
CPSF1-210ENST00000532935 SCN7AQ01118 1682 aa20.21■□□□□ 0.83
CPSF1-210ENST00000532935 AFDNP55196 1824 aaKnown RBP20.19■□□□□ 0.82
CPSF1-210ENST00000532935 A0A087WZG4 1122 aa20.19■□□□□ 0.82
CPSF1-210ENST00000532935 IL6STP40189 918 aaPredicted RBP20.19■□□□□ 0.82
CPSF1-210ENST00000532935 CHD4Q14839 1912 aa20.19■□□□□ 0.82
CPSF1-210ENST00000532935 BCORQ6W2J9 1755 aa20.18■□□□□ 0.82
CPSF1-210ENST00000532935 EIF4A1P60842 406 aaKnown RBP20.18■□□□□ 0.82
CPSF1-210ENST00000532935 TRIM35Q9UPQ4 493 aa20.18■□□□□ 0.82
CPSF1-210ENST00000532935 ZNF330Q9Y3S2 320 aaPredicted RBP20.18■□□□□ 0.82
CPSF1-210ENST00000532935 PARP3Q9Y6F1 533 aa20.18■□□□□ 0.82
CPSF1-210ENST00000532935 KIAA1551Q9HCM1 1747 aa20.18■□□□□ 0.82
CPSF1-210ENST00000532935 N4BP2Q86UW6 1770 aaPredicted RBP20.18■□□□□ 0.82
CPSF1-210ENST00000532935 TSPYL4Q9UJ04 414 aa20.17■□□□□ 0.82
CPSF1-210ENST00000532935 TM4SF1P30408 202 aa20.16■□□□□ 0.82
CPSF1-210ENST00000532935 DDR1Q08345 913 aa20.16■□□□□ 0.82
CPSF1-210ENST00000532935 GPR162Q16538 588 aa20.16■□□□□ 0.82
CPSF1-210ENST00000532935 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
CPSF1-210ENST00000532935 BABAM1Q9NWV8 329 aa20.16■□□□□ 0.82
CPSF1-210ENST00000532935 C10orf71Q711Q0 1435 aa20.16■□□□□ 0.82
CPSF1-210ENST00000532935 GIGYF1O75420 1035 aaPredicted RBP20.15■□□□□ 0.82
CPSF1-210ENST00000532935 PIP4K2AP48426 406 aaPredicted RBP20.15■□□□□ 0.82
CPSF1-210ENST00000532935 NPM2Q86SE8 214 aaKnown RBP20.15■□□□□ 0.82
CPSF1-210ENST00000532935 MRS2Q9HD23 443 aa20.15■□□□□ 0.82
CPSF1-210ENST00000532935 NRXN2Q9P2S2 1712 aa20.15■□□□□ 0.82
CPSF1-210ENST00000532935 APAF1O14727 1248 aa20.14■□□□□ 0.81
CPSF1-210ENST00000532935 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.81
CPSF1-210ENST00000532935 TBC1D2BQ9UPU7 963 aa20.14■□□□□ 0.81
CPSF1-210ENST00000532935 NBPF26B4DH59 902 aa20.13■□□□□ 0.81
CPSF1-210ENST00000532935 POLRMTO00411 1230 aaKnown RBP20.13■□□□□ 0.81
CPSF1-210ENST00000532935 NFIXQ14938 502 aa20.13■□□□□ 0.81
CPSF1-210ENST00000532935 NBPF10Q6P3W6 841 aaKnown RBP20.13■□□□□ 0.81
CPSF1-210ENST00000532935 NBPF15Q8N660 670 aa20.13■□□□□ 0.81
CPSF1-210ENST00000532935 BRCA1P38398 1863 aaKnown RBP20.13■□□□□ 0.81
CPSF1-210ENST00000532935 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
CPSF1-210ENST00000532935 DZIP3Q86Y13 1208 aaKnown RBP20.11■□□□□ 0.81
CPSF1-210ENST00000532935 CHL1O00533 1208 aa20.1■□□□□ 0.81
CPSF1-210ENST00000532935 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
CPSF1-210ENST00000532935 YBX3P16989 372 aaKnown RBP eCLIP20.1■□□□□ 0.812e-11■□□□□ 9
CPSF1-210ENST00000532935 TGFB2P61812 414 aa20.1■□□□□ 0.81
CPSF1-210ENST00000532935 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
CPSF1-210ENST00000532935 TBC1D9BQ66K14 1250 aa20.08■□□□□ 0.81
CPSF1-210ENST00000532935 BICDL1Q6ZP65 573 aa20.08■□□□□ 0.81
CPSF1-210ENST00000532935 NUP98P52948 1817 aa20.08■□□□□ 0.8
CPSF1-210ENST00000532935 SERPINB2P05120 415 aa20.07■□□□□ 0.8
CPSF1-210ENST00000532935 YY1P25490 414 aa20.07■□□□□ 0.8
CPSF1-210ENST00000532935 A0A0G2JLW4 131 aa20.06■□□□□ 0.8
CPSF1-210ENST00000532935 GRIN3BO60391 1043 aa20.06■□□□□ 0.8
CPSF1-210ENST00000532935 ANKRD31Q8N7Z5 1873 aa20.06■□□□□ 0.8
CPSF1-210ENST00000532935 CFAP44Q96MT7 982 aa20.06■□□□□ 0.8
CPSF1-210ENST00000532935 WWC3Q9ULE0 1092 aa20.06■□□□□ 0.8
CPSF1-210ENST00000532935 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
CPSF1-210ENST00000532935 ERBB4Q15303 1308 aa20.05■□□□□ 0.8
CPSF1-210ENST00000532935 DPEP1P16444 411 aa20.05■□□□□ 0.8
CPSF1-210ENST00000532935 CARMIL3Q8ND23 1372 aa20.05■□□□□ 0.8
CPSF1-210ENST00000532935 ARFGEF1Q9Y6D6 1849 aa20.04■□□□□ 0.8
CPSF1-210ENST00000532935 MYL6BP14649 208 aa20.04■□□□□ 0.8
CPSF1-210ENST00000532935 EIF2S2P20042 333 aaKnown RBP20.04■□□□□ 0.8
CPSF1-210ENST00000532935 CALD1Q05682 793 aaKnown RBP20.04■□□□□ 0.8
CPSF1-210ENST00000532935 CLEC4GQ6UXB4 293 aa20.04■□□□□ 0.8
CPSF1-210ENST00000532935 NGEFQ8N5V2 710 aa20.04■□□□□ 0.8
CPSF1-210ENST00000532935 ZNF652Q9Y2D9 606 aa20.04■□□□□ 0.8
CPSF1-210ENST00000532935 RGL2O15211 777 aa20.03■□□□□ 0.8
CPSF1-210ENST00000532935 ZNF853P0CG23 659 aa20.03■□□□□ 0.8
CPSF1-210ENST00000532935 KRT24Q2M2I5 525 aa20.03■□□□□ 0.8
CPSF1-210ENST00000532935 SETDB2Q96T68 719 aa20.03■□□□□ 0.8
CPSF1-210ENST00000532935 IFT57Q9NWB7 429 aa20.03■□□□□ 0.8
CPSF1-210ENST00000532935 KCNA3P22001 575 aa20.02■□□□□ 0.8
CPSF1-210ENST00000532935 MBIPQ9NS73 344 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms