RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 FLIIQ13045 1269 aa17.75■□□□□ 0.43
LTBP3-221ENST00000532932 DLG5Q8TDM6 1919 aa17.75■□□□□ 0.43
LTBP3-221ENST00000532932 HSPA4P34932 840 aa17.75■□□□□ 0.43
LTBP3-221ENST00000532932 CWC27Q6UX04 472 aaKnown RBP17.75■□□□□ 0.43
LTBP3-221ENST00000532932 RPAP1Q9BWH6 1393 aaPredicted RBP17.75■□□□□ 0.43
LTBP3-221ENST00000532932 ATP7BP35670 1465 aa17.75■□□□□ 0.43
LTBP3-221ENST00000532932 RIOK3O14730 519 aaKnown RBP17.75■□□□□ 0.43
LTBP3-221ENST00000532932 F13A1P00488 732 aa17.75■□□□□ 0.43
LTBP3-221ENST00000532932 SALL3Q9BXA9 1300 aa17.74■□□□□ 0.43
LTBP3-221ENST00000532932 AP5Z1O43299 807 aa17.74■□□□□ 0.43
LTBP3-221ENST00000532932 ZSCAN20P17040 1043 aaPredicted RBP17.74■□□□□ 0.43
LTBP3-221ENST00000532932 DMTNQ08495 405 aa17.74■□□□□ 0.43
LTBP3-221ENST00000532932 RASEFQ8IZ41 740 aa17.74■□□□□ 0.43
LTBP3-221ENST00000532932 SNX14Q9Y5W7 946 aa17.74■□□□□ 0.43
LTBP3-221ENST00000532932 AATKQ6ZMQ8 1374 aa17.74■□□□□ 0.43
LTBP3-221ENST00000532932 DRC7Q8IY82 874 aa17.74■□□□□ 0.43
LTBP3-221ENST00000532932 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.74■□□□□ 0.43
LTBP3-221ENST00000532932 MTHFSDQ2M296 383 aaKnown RBP17.74■□□□□ 0.43
LTBP3-221ENST00000532932 LIMCH1Q9UPQ0 1083 aa17.74■□□□□ 0.43
LTBP3-221ENST00000532932 UBTFL1P0CB47 393 aaPredicted RBP17.73■□□□□ 0.43
LTBP3-221ENST00000532932 CASTP20810 708 aaKnown RBP17.73■□□□□ 0.43
LTBP3-221ENST00000532932 CAMK4Q16566 473 aa17.73■□□□□ 0.43
LTBP3-221ENST00000532932 RUFY3Q7L099 469 aa17.73■□□□□ 0.43
LTBP3-221ENST00000532932 ALKQ9UM73 1620 aa17.73■□□□□ 0.43
LTBP3-221ENST00000532932 TCHHQ07283 1943 aa17.73■□□□□ 0.43
LTBP3-221ENST00000532932 ATP6V1DQ9Y5K8 247 aa17.73■□□□□ 0.43
LTBP3-221ENST00000532932 DIP2CQ9Y2E4 1556 aa17.72■□□□□ 0.43
LTBP3-221ENST00000532932 MYO5BQ9ULV0 1848 aa17.72■□□□□ 0.43
LTBP3-221ENST00000532932 DIAPH3Q9NSV4 1193 aa17.72■□□□□ 0.43
LTBP3-221ENST00000532932 LARGE1O95461 756 aa17.72■□□□□ 0.43
LTBP3-221ENST00000532932 U2AF2P26368 475 aaKnown RBP eCLIP17.72■□□□□ 0.43
LTBP3-221ENST00000532932 GJB2P29033 226 aa17.72■□□□□ 0.43
LTBP3-221ENST00000532932 FERMT3Q86UX7 667 aa17.72■□□□□ 0.43
LTBP3-221ENST00000532932 KCNF1Q9H3M0 494 aa17.72■□□□□ 0.43
LTBP3-221ENST00000532932 CPS1P31327 1500 aa17.71■□□□□ 0.43
LTBP3-221ENST00000532932 SPTLC3Q9NUV7 552 aa17.71■□□□□ 0.43
LTBP3-221ENST00000532932 TMEM87AQ8NBN3 555 aa17.71■□□□□ 0.43
LTBP3-221ENST00000532932 KIAA1524Q8TCG1 905 aa17.71■□□□□ 0.43
LTBP3-221ENST00000532932 STAP2Q9UGK3 403 aa17.71■□□□□ 0.43
LTBP3-221ENST00000532932 GOLGA6L6A8MZA4 724 aa17.7■□□□□ 0.42
LTBP3-221ENST00000532932 PTGS1P23219 599 aa17.7■□□□□ 0.42
LTBP3-221ENST00000532932 OS9Q13438 667 aaPredicted RBP17.7■□□□□ 0.42
LTBP3-221ENST00000532932 DIP2BQ9P265 1576 aa17.7■□□□□ 0.42
LTBP3-221ENST00000532932 GTF2F1P35269 517 aaKnown RBP eCLIP17.7■□□□□ 0.421e-6■■■■□ 21.6
LTBP3-221ENST00000532932 FAM173BQ6P4H8 233 aa17.7■□□□□ 0.42
LTBP3-221ENST00000532932 NECAB1Q8N987 351 aa17.7■□□□□ 0.42
LTBP3-221ENST00000532932 CLTCQ00610 1675 aaKnown RBP17.69■□□□□ 0.42
LTBP3-221ENST00000532932 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
LTBP3-221ENST00000532932 JAKMIP1Q96N16 626 aaKnown RBP17.69■□□□□ 0.42
LTBP3-221ENST00000532932 RAD50Q92878 1312 aa17.69■□□□□ 0.42
LTBP3-221ENST00000532932 SGSM2O43147 1006 aa17.69■□□□□ 0.42
LTBP3-221ENST00000532932 CCDC192P0DO97 292 aa17.69■□□□□ 0.42
LTBP3-221ENST00000532932 PPP1R42Q7Z4L9 355 aa17.69■□□□□ 0.42
LTBP3-221ENST00000532932 CKAP2LQ8IYA6 745 aa17.69■□□□□ 0.42
LTBP3-221ENST00000532932 SSH2Q76I76 1423 aa17.69■□□□□ 0.42
LTBP3-221ENST00000532932 MAP3K19Q56UN5 1328 aa17.68■□□□□ 0.42
LTBP3-221ENST00000532932 KCNJ4P48050 445 aa17.68■□□□□ 0.42
LTBP3-221ENST00000532932 PRPF40BQ6NWY9 871 aaKnown RBP17.68■□□□□ 0.42
LTBP3-221ENST00000532932 LUZP1Q86V48 1076 aa17.68■□□□□ 0.42
LTBP3-221ENST00000532932 CNTROBQ8N137 903 aa17.68■□□□□ 0.42
LTBP3-221ENST00000532932 C16orf45Q96MC5 204 aaPredicted RBP17.68■□□□□ 0.42
LTBP3-221ENST00000532932 SRGAP3O43295 1099 aa17.67■□□□□ 0.42
LTBP3-221ENST00000532932 PDRG1Q9NUG6 133 aa17.67■□□□□ 0.42
LTBP3-221ENST00000532932 RHPN1Q8TCX5 695 aa17.67■□□□□ 0.42
LTBP3-221ENST00000532932 TTC14Q96N46 770 aa17.67■□□□□ 0.42
LTBP3-221ENST00000532932 USP44Q9H0E7 712 aa17.67■□□□□ 0.42
LTBP3-221ENST00000532932 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.67■□□□□ 0.42
LTBP3-221ENST00000532932 CRB1P82279 1406 aa17.67■□□□□ 0.42
LTBP3-221ENST00000532932 UTP14CQ5TAP6 766 aaKnown RBP17.67■□□□□ 0.42
LTBP3-221ENST00000532932 LSG1Q9H089 658 aaKnown RBP17.67■□□□□ 0.42
LTBP3-221ENST00000532932 MTMR6Q9Y217 621 aa17.67■□□□□ 0.42
LTBP3-221ENST00000532932 GOLGA6L4A6NEF3 574 aa17.66■□□□□ 0.42
LTBP3-221ENST00000532932 EIF2S2P20042 333 aaKnown RBP17.66■□□□□ 0.42
LTBP3-221ENST00000532932 CCDC186Q7Z3E2 898 aa17.66■□□□□ 0.42
LTBP3-221ENST00000532932 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
LTBP3-221ENST00000532932 LRMPQ12912 555 aa17.66■□□□□ 0.42
LTBP3-221ENST00000532932 FUCA2Q9BTY2 467 aa17.66■□□□□ 0.42
LTBP3-221ENST00000532932 SOS1Q07889 1333 aaPredicted RBP17.66■□□□□ 0.42
LTBP3-221ENST00000532932 ADCK5Q3MIX3 580 aa17.65■□□□□ 0.42
LTBP3-221ENST00000532932 TMEM131LA2VDJ0 1609 aa17.65■□□□□ 0.42
LTBP3-221ENST00000532932 ZNF592Q92610 1267 aa17.65■□□□□ 0.42
LTBP3-221ENST00000532932 TRIM5Q9C035 493 aa17.65■□□□□ 0.42
LTBP3-221ENST00000532932 PHAXQ9H814 394 aaKnown RBP17.65■□□□□ 0.42
LTBP3-221ENST00000532932 TFIP11Q9UBB9 837 aaKnown RBP17.65■□□□□ 0.42
LTBP3-221ENST00000532932 PRR36Q9H6K5 1346 aa17.65■□□□□ 0.42
LTBP3-221ENST00000532932 TPM3P06753 285 aa17.64■□□□□ 0.41
LTBP3-221ENST00000532932 LARP1BQ659C4 914 aaKnown RBP17.64■□□□□ 0.41
LTBP3-221ENST00000532932 NUP62CLQ9H1M0 184 aa17.64■□□□□ 0.41
LTBP3-221ENST00000532932 LIG1P18858 919 aa17.64■□□□□ 0.41
LTBP3-221ENST00000532932 AMPHP49418 695 aa17.64■□□□□ 0.41
LTBP3-221ENST00000532932 MAP3K11Q16584 847 aa17.64■□□□□ 0.41
LTBP3-221ENST00000532932 PI4K2BQ8TCG2 481 aa17.64■□□□□ 0.41
LTBP3-221ENST00000532932 TCEANC2Q96MN5 208 aa17.64■□□□□ 0.41
LTBP3-221ENST00000532932 PTH1RQ03431 593 aa17.64■□□□□ 0.41
LTBP3-221ENST00000532932 NRBP1Q9UHY1 535 aa17.64■□□□□ 0.41
LTBP3-221ENST00000532932 LTV1Q96GA3 475 aaPredicted RBP17.63■□□□□ 0.41
LTBP3-221ENST00000532932 GTPBP4Q9BZE4 634 aaKnown RBP17.63■□□□□ 0.41
LTBP3-221ENST00000532932 HYPKQ9NX55 129 aa17.63■□□□□ 0.41
LTBP3-221ENST00000532932 CYP46A1Q9Y6A2 500 aa17.63■□□□□ 0.41
LTBP3-221ENST00000532932 ACEP12821 1306 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms