RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 CT47B1P0C2W7 299 aaPredicted RBP18.45■□□□□ 0.54
COL16A1-217ENST00000532877 SMARCC1Q92922 1105 aaPredicted RBP18.45■□□□□ 0.54
COL16A1-217ENST00000532877 LY75O60449 1722 aa18.45■□□□□ 0.54
COL16A1-217ENST00000532877 SOS1Q07889 1333 aaPredicted RBP18.45■□□□□ 0.54
COL16A1-217ENST00000532877 ZNF831Q5JPB2 1677 aa18.44■□□□□ 0.54
COL16A1-217ENST00000532877 TJP1Q07157 1748 aa18.44■□□□□ 0.54
COL16A1-217ENST00000532877 VAMP4O75379 141 aa18.44■□□□□ 0.54
COL16A1-217ENST00000532877 GIGYF1O75420 1035 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-217ENST00000532877 HOXB7P09629 217 aa18.44■□□□□ 0.54
COL16A1-217ENST00000532877 SLC15A2Q16348 729 aa18.44■□□□□ 0.54
COL16A1-217ENST00000532877 ATF5Q9Y2D1 282 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-217ENST00000532877 QSER1Q2KHR3 1735 aa18.43■□□□□ 0.54
COL16A1-217ENST00000532877 TXNRD1Q16881 649 aa18.43■□□□□ 0.54
COL16A1-217ENST00000532877 RBM42Q9BTD8 480 aaKnown RBP18.43■□□□□ 0.54
COL16A1-217ENST00000532877 PRAMEF22A3QJZ6 481 aa18.42■□□□□ 0.54
COL16A1-217ENST00000532877 SNRPA1P09661 255 aaKnown RBP18.42■□□□□ 0.54
COL16A1-217ENST00000532877 MTFR1LQ9H019 292 aa18.42■□□□□ 0.54
COL16A1-217ENST00000532877 VSIG10Q8N0Z9 540 aa18.41■□□□□ 0.54
COL16A1-217ENST00000532877 SLC4A9Q96Q91 983 aa18.41■□□□□ 0.54
COL16A1-217ENST00000532877 RCAN3Q9UKA8 241 aa18.41■□□□□ 0.54
COL16A1-217ENST00000532877 LOC102724428A0A0B4J2F2 783 aa18.4■□□□□ 0.54
COL16A1-217ENST00000532877 SIK1P57059 783 aa18.4■□□□□ 0.54
COL16A1-217ENST00000532877 ZNF428Q96B54 188 aa18.4■□□□□ 0.54
COL16A1-217ENST00000532877 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
COL16A1-217ENST00000532877 RARSP54136 660 aaKnown RBP18.39■□□□□ 0.53
COL16A1-217ENST00000532877 HDGFL1Q5TGJ6 251 aa18.39■□□□□ 0.53
COL16A1-217ENST00000532877 EIF2S2P20042 333 aaKnown RBP18.37■□□□□ 0.53
COL16A1-217ENST00000532877 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
COL16A1-217ENST00000532877 ALDH1L2Q3SY69 923 aa18.37■□□□□ 0.53
COL16A1-217ENST00000532877 DNAJC10Q8IXB1 793 aa18.37■□□□□ 0.53
COL16A1-217ENST00000532877 SSH1Q8WYL5 1049 aa18.37■□□□□ 0.53
COL16A1-217ENST00000532877 NECTIN2Q92692 538 aa18.37■□□□□ 0.53
COL16A1-217ENST00000532877 BCL2L13Q9BXK5 485 aa18.37■□□□□ 0.53
COL16A1-217ENST00000532877 STK32BQ9NY57 414 aa18.37■□□□□ 0.53
COL16A1-217ENST00000532877 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
COL16A1-217ENST00000532877 TAF1LQ8IZX4 1826 aa18.37■□□□□ 0.53
COL16A1-217ENST00000532877 TUBGCP6Q96RT7 1819 aa18.37■□□□□ 0.53
COL16A1-217ENST00000532877 TCERG1O14776 1098 aaKnown RBP18.36■□□□□ 0.53
COL16A1-217ENST00000532877 CACNA1FO60840 1977 aa18.36■□□□□ 0.53
COL16A1-217ENST00000532877 ITPK1Q13572 414 aa18.36■□□□□ 0.53
COL16A1-217ENST00000532877 CCDC30Q5VVM6 783 aa18.36■□□□□ 0.53
COL16A1-217ENST00000532877 TEX13AQ9BXU3 409 aaPredicted RBP18.36■□□□□ 0.53
COL16A1-217ENST00000532877 SMC4Q9NTJ3 1288 aa18.36■□□□□ 0.53
COL16A1-217ENST00000532877 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
COL16A1-217ENST00000532877 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
COL16A1-217ENST00000532877 BCAR3O75815 825 aa18.34■□□□□ 0.53
COL16A1-217ENST00000532877 ARXQ96QS3 562 aa18.34■□□□□ 0.53
COL16A1-217ENST00000532877 STK31Q9BXU1 1019 aa18.34■□□□□ 0.53
COL16A1-217ENST00000532877 CHPF2Q9P2E5 772 aa18.34■□□□□ 0.53
COL16A1-217ENST00000532877 STARD3NLO95772 234 aa18.33■□□□□ 0.52
COL16A1-217ENST00000532877 CYP19A1P11511 503 aaPredicted RBP18.33■□□□□ 0.52
COL16A1-217ENST00000532877 KCNQ4P56696 695 aa18.33■□□□□ 0.52
COL16A1-217ENST00000532877 MRPL50Q8N5N7 158 aaKnown RBP18.33■□□□□ 0.52
COL16A1-217ENST00000532877 ERBB4Q15303 1308 aa18.32■□□□□ 0.52
COL16A1-217ENST00000532877 MYH14Q7Z406 1995 aaKnown RBP18.32■□□□□ 0.52
COL16A1-217ENST00000532877 PDIA6Q15084 440 aa18.32■□□□□ 0.52
COL16A1-217ENST00000532877 SLC27A3Q5K4L6 730 aa18.32■□□□□ 0.52
COL16A1-217ENST00000532877 LINC00116Q8NCU8 138 aa18.32■□□□□ 0.52
COL16A1-217ENST00000532877 DBF4Q9UBU7 674 aaPredicted RBP18.32■□□□□ 0.52
COL16A1-217ENST00000532877 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
COL16A1-217ENST00000532877 BRPF1P55201 1214 aaPredicted RBP18.31■□□□□ 0.52
COL16A1-217ENST00000532877 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
COL16A1-217ENST00000532877 DDX21Q9NR30 783 aaKnown RBP eCLIP18.31■□□□□ 0.52
COL16A1-217ENST00000532877 LRRC4BQ9NT99 713 aa18.31■□□□□ 0.52
COL16A1-217ENST00000532877 C4BP0C0L5 1744 aa18.31■□□□□ 0.52
COL16A1-217ENST00000532877 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
COL16A1-217ENST00000532877 ANXA1P04083 346 aa18.3■□□□□ 0.52
COL16A1-217ENST00000532877 A1BGP04217 495 aa18.3■□□□□ 0.52
COL16A1-217ENST00000532877 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
COL16A1-217ENST00000532877 NBPF26B4DH59 902 aa18.29■□□□□ 0.52
COL16A1-217ENST00000532877 CRKLP46109 303 aaKnown RBP18.29■□□□□ 0.52
COL16A1-217ENST00000532877 ZNF827Q17R98 1081 aa18.29■□□□□ 0.52
COL16A1-217ENST00000532877 NBPF10Q6P3W6 841 aaKnown RBP18.29■□□□□ 0.52
COL16A1-217ENST00000532877 NBPF15Q8N660 670 aa18.29■□□□□ 0.52
COL16A1-217ENST00000532877 ZBTB1Q9Y2K1 713 aa18.29■□□□□ 0.52
COL16A1-217ENST00000532877 CNTNAP4Q9C0A0 1308 aa18.28■□□□□ 0.52
COL16A1-217ENST00000532877 MYL6BP14649 208 aa18.28■□□□□ 0.52
COL16A1-217ENST00000532877 INTS5Q6P9B9 1019 aaKnown RBP18.28■□□□□ 0.52
COL16A1-217ENST00000532877 G2E3Q7L622 706 aa18.28■□□□□ 0.52
COL16A1-217ENST00000532877 LRP10Q7Z4F1 713 aa18.28■□□□□ 0.52
COL16A1-217ENST00000532877 CCDC87Q9NVE4 849 aa18.28■□□□□ 0.52
COL16A1-217ENST00000532877 HYPKQ9NX55 129 aa18.28■□□□□ 0.52
COL16A1-217ENST00000532877 SUPT16HQ9Y5B9 1047 aaKnown RBP18.28■□□□□ 0.52
COL16A1-217ENST00000532877 RNF123Q5XPI4 1314 aa18.27■□□□□ 0.52
COL16A1-217ENST00000532877 RRP1P56182 461 aaKnown RBP18.27■□□□□ 0.52
COL16A1-217ENST00000532877 NOB1Q9ULX3 412 aaKnown RBP18.27■□□□□ 0.52
COL16A1-217ENST00000532877 CANXP27824 592 aaKnown RBP18.26■□□□□ 0.51
COL16A1-217ENST00000532877 FLIIQ13045 1269 aa18.26■□□□□ 0.51
COL16A1-217ENST00000532877 FRAT1Q92837 279 aaPredicted RBP18.26■□□□□ 0.51
COL16A1-217ENST00000532877 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
COL16A1-217ENST00000532877 RC3H1Q5TC82 1133 aaKnown RBP18.25■□□□□ 0.51
COL16A1-217ENST00000532877 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
COL16A1-217ENST00000532877 PTPRCP08575 1304 aa18.24■□□□□ 0.51
COL16A1-217ENST00000532877 UBR3Q6ZT12 1888 aa18.24■□□□□ 0.51
COL16A1-217ENST00000532877 PLIN1O60240 522 aa18.24■□□□□ 0.51
COL16A1-217ENST00000532877 ZKSCAN2Q63HK3 967 aa18.24■□□□□ 0.51
COL16A1-217ENST00000532877 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.24■□□□□ 0.51
COL16A1-217ENST00000532877 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
COL16A1-217ENST00000532877 SLC16A10Q8TF71 515 aa18.23■□□□□ 0.51
COL16A1-217ENST00000532877 XAGE3Q8WTP9 111 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms