RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 SNPHO15079 494 aa13.14□□□□□ -0.31
PPFIA1-223ENST00000532793 SSFA2P28290 1259 aa13.14□□□□□ -0.31
PPFIA1-223ENST00000532793 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
PPFIA1-223ENST00000532793 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
PPFIA1-223ENST00000532793 IGSF1Q8N6C5 1336 aa13.13□□□□□ -0.31
PPFIA1-223ENST00000532793 GNPATO15228 680 aa13.13□□□□□ -0.31
PPFIA1-223ENST00000532793 AMOTQ4VCS5 1084 aa13.13□□□□□ -0.31
PPFIA1-223ENST00000532793 C1orf141Q5JVX7 400 aa13.13□□□□□ -0.31
PPFIA1-223ENST00000532793 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
PPFIA1-223ENST00000532793 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
PPFIA1-223ENST00000532793 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
PPFIA1-223ENST00000532793 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
PPFIA1-223ENST00000532793 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
PPFIA1-223ENST00000532793 CABP4P57796 275 aa13.11□□□□□ -0.31
PPFIA1-223ENST00000532793 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
PPFIA1-223ENST00000532793 VIRMAQ69YN4 1812 aaKnown RBP13.11□□□□□ -0.31
PPFIA1-223ENST00000532793 COL5A3P25940 1745 aaPredicted RBP13.1□□□□□ -0.31
PPFIA1-223ENST00000532793 GIGYF1O75420 1035 aaPredicted RBP13.1□□□□□ -0.31
PPFIA1-223ENST00000532793 ATG3Q9NT62 314 aa13.1□□□□□ -0.31
PPFIA1-223ENST00000532793 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
PPFIA1-223ENST00000532793 SCN11AQ9UI33 1791 aa13.09□□□□□ -0.31
PPFIA1-223ENST00000532793 YBX3P16989 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
PPFIA1-223ENST00000532793 MTHFSP49914 203 aa13.09□□□□□ -0.31
PPFIA1-223ENST00000532793 EMP3P54852 163 aa13.09□□□□□ -0.31
PPFIA1-223ENST00000532793 HS3ST6Q96QI5 342 aa13.09□□□□□ -0.31
PPFIA1-223ENST00000532793 SENP3-EIF4A1A0A087X0R7 540 aa13.08□□□□□ -0.32
PPFIA1-223ENST00000532793 ITPK1Q13572 414 aa13.08□□□□□ -0.32
PPFIA1-223ENST00000532793 TRAPPC3LQ5T215 181 aa13.08□□□□□ -0.32
PPFIA1-223ENST00000532793 SULT6B1Q6IMI4 303 aa13.08□□□□□ -0.32
PPFIA1-223ENST00000532793 C1QTNF8P60827 252 aa13.07□□□□□ -0.32
PPFIA1-223ENST00000532793 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
PPFIA1-223ENST00000532793 KDRP35968 1356 aa13.07□□□□□ -0.32
PPFIA1-223ENST00000532793 KDM6AO15550 1401 aaPredicted RBP13.06□□□□□ -0.32
PPFIA1-223ENST00000532793 C4AP0C0L4 1744 aa13.06□□□□□ -0.32
PPFIA1-223ENST00000532793 RFC4P35249 363 aa13.06□□□□□ -0.32
PPFIA1-223ENST00000532793 SMIM5Q71RC9 77 aa13.06□□□□□ -0.32
PPFIA1-223ENST00000532793 AMIGO3Q86WK7 504 aa13.06□□□□□ -0.32
PPFIA1-223ENST00000532793 OCEL1Q9H607 264 aa13.06□□□□□ -0.32
PPFIA1-223ENST00000532793 KIF13BQ9NQT8 1826 aa13.05□□□□□ -0.32
PPFIA1-223ENST00000532793 MMP10P09238 476 aa13.05□□□□□ -0.32
PPFIA1-223ENST00000532793 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
PPFIA1-223ENST00000532793 NLGN1Q8N2Q7 840 aa13.05□□□□□ -0.32
PPFIA1-223ENST00000532793 WWC3Q9ULE0 1092 aa13.05□□□□□ -0.32
PPFIA1-223ENST00000532793 CNTNAP4Q9C0A0 1308 aa13.05□□□□□ -0.32
PPFIA1-223ENST00000532793 CICQ96RK0 1608 aaPredicted RBP13.05□□□□□ -0.32
PPFIA1-223ENST00000532793 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
PPFIA1-223ENST00000532793 PTCD1O75127 700 aaKnown RBP13.04□□□□□ -0.32
PPFIA1-223ENST00000532793 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
PPFIA1-223ENST00000532793 KIF7Q2M1P5 1343 aa13.04□□□□□ -0.32
PPFIA1-223ENST00000532793 TJP1Q07157 1748 aa13.03□□□□□ -0.32
PPFIA1-223ENST00000532793 IL13P35225 146 aa13.03□□□□□ -0.32
PPFIA1-223ENST00000532793 AKAP4Q5JQC9 854 aa13.03□□□□□ -0.32
PPFIA1-223ENST00000532793 NFATC2IPQ8NCF5 419 aa13.03□□□□□ -0.32
PPFIA1-223ENST00000532793 GPBP1L1Q9HC44 474 aaPredicted RBP13.03□□□□□ -0.32
PPFIA1-223ENST00000532793 CCDC87Q9NVE4 849 aa13.03□□□□□ -0.32
PPFIA1-223ENST00000532793 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
PPFIA1-223ENST00000532793 MYH14Q7Z406 1995 aaKnown RBP13.03□□□□□ -0.32
PPFIA1-223ENST00000532793 ATP10DQ9P241 1426 aa13.03□□□□□ -0.32
PPFIA1-223ENST00000532793 FAM205CA6NFA0 338 aa13.02□□□□□ -0.33
PPFIA1-223ENST00000532793 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
PPFIA1-223ENST00000532793 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
PPFIA1-223ENST00000532793 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
PPFIA1-223ENST00000532793 CC2D1BQ5T0F9 858 aaKnown RBP13.01□□□□□ -0.33
PPFIA1-223ENST00000532793 DIAPH1O60610 1272 aaKnown RBP13□□□□□ -0.33
PPFIA1-223ENST00000532793 HMOX1P09601 288 aa13□□□□□ -0.33
PPFIA1-223ENST00000532793 CRKLP46109 303 aaKnown RBP13□□□□□ -0.33
PPFIA1-223ENST00000532793 TGFB2P61812 414 aa13□□□□□ -0.33
PPFIA1-223ENST00000532793 MIER1Q8N108 512 aa13□□□□□ -0.33
PPFIA1-223ENST00000532793 ZNF526Q8TF50 670 aaPredicted RBP13□□□□□ -0.33
PPFIA1-223ENST00000532793 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
PPFIA1-223ENST00000532793 CNGB1Q14028 1251 aaPredicted RBP12.99□□□□□ -0.33
PPFIA1-223ENST00000532793 BCS1LQ9Y276 419 aa12.99□□□□□ -0.33
PPFIA1-223ENST00000532793 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
PPFIA1-223ENST00000532793 PXDNLA1KZ92 1463 aa12.98□□□□□ -0.33
PPFIA1-223ENST00000532793 C10orf71Q711Q0 1435 aa12.98□□□□□ -0.33
PPFIA1-223ENST00000532793 BRCA1P38398 1863 aaKnown RBP12.98□□□□□ -0.33
PPFIA1-223ENST00000532793 GYS1P13807 737 aa12.98□□□□□ -0.33
PPFIA1-223ENST00000532793 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
PPFIA1-223ENST00000532793 ARFGEF1Q9Y6D6 1849 aa12.97□□□□□ -0.33
PPFIA1-223ENST00000532793 ZPR1O75312 459 aa12.97□□□□□ -0.33
PPFIA1-223ENST00000532793 NUBP1P53384 320 aa12.97□□□□□ -0.33
PPFIA1-223ENST00000532793 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
PPFIA1-223ENST00000532793 MRC1P22897 1456 aa12.97□□□□□ -0.33
PPFIA1-223ENST00000532793 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.33
PPFIA1-223ENST00000532793 A0A0G2JLW4 131 aa12.96□□□□□ -0.33
PPFIA1-223ENST00000532793 U2SURPO15042 1029 aaKnown RBP12.96□□□□□ -0.33
PPFIA1-223ENST00000532793 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.33
PPFIA1-223ENST00000532793 FCHSD2O94868 740 aa12.96□□□□□ -0.33
PPFIA1-223ENST00000532793 ADCY9O60503 1353 aa12.95□□□□□ -0.34
PPFIA1-223ENST00000532793 ARHGAP27Q6ZUM4 889 aa12.95□□□□□ -0.34
PPFIA1-223ENST00000532793 CFAP53Q96M91 514 aa12.95□□□□□ -0.34
PPFIA1-223ENST00000532793 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
PPFIA1-223ENST00000532793 ADAMTS7Q9UKP4 1686 aa12.94□□□□□ -0.34
PPFIA1-223ENST00000532793 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
PPFIA1-223ENST00000532793 DPEP1P16444 411 aa12.94□□□□□ -0.34
PPFIA1-223ENST00000532793 MTHFSDQ2M296 383 aaKnown RBP12.94□□□□□ -0.34
PPFIA1-223ENST00000532793 DNAJC10Q8IXB1 793 aa12.94□□□□□ -0.34
PPFIA1-223ENST00000532793 LGR6Q9HBX8 967 aa12.94□□□□□ -0.34
PPFIA1-223ENST00000532793 PIM2Q9P1W9 311 aa12.94□□□□□ -0.34
PPFIA1-223ENST00000532793 SRP68Q9UHB9 627 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms