RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
SDHD-213ENST00000532699 TM4SF1P30408 202 aa16.92■□□□□ 0.3
SDHD-213ENST00000532699 CCDC87Q9NVE4 849 aa16.92■□□□□ 0.3
SDHD-213ENST00000532699 POLRMTO00411 1230 aaKnown RBP16.9■□□□□ 0.3
SDHD-213ENST00000532699 KCNQ3O43525 872 aa16.9■□□□□ 0.3
SDHD-213ENST00000532699 TGFB2P61812 414 aa16.9■□□□□ 0.3
SDHD-213ENST00000532699 USPL1Q5W0Q7 1092 aa16.9■□□□□ 0.3
SDHD-213ENST00000532699 COL11A2P13942 1736 aaPredicted RBP16.9■□□□□ 0.3
SDHD-213ENST00000532699 COL15A1P39059 1388 aa16.89■□□□□ 0.3
SDHD-213ENST00000532699 CACNA1SQ13698 1873 aa16.89■□□□□ 0.29
SDHD-213ENST00000532699 ZNF496Q96IT1 587 aaPredicted RBP16.89■□□□□ 0.29
SDHD-213ENST00000532699 GNAT3A8MTJ3 354 aa16.88■□□□□ 0.29
SDHD-213ENST00000532699 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
SDHD-213ENST00000532699 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
SDHD-213ENST00000532699 PARP3Q9Y6F1 533 aa16.88■□□□□ 0.29
SDHD-213ENST00000532699 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
SDHD-213ENST00000532699 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
SDHD-213ENST00000532699 NARFQ9UHQ1 456 aa16.87■□□□□ 0.29
SDHD-213ENST00000532699 HEG1Q9ULI3 1381 aa16.87■□□□□ 0.29
SDHD-213ENST00000532699 GIGYF1O75420 1035 aaPredicted RBP16.86■□□□□ 0.29
SDHD-213ENST00000532699 EIF5P55010 431 aaKnown RBP16.86■□□□□ 0.29
SDHD-213ENST00000532699 NFIXQ14938 502 aa16.86■□□□□ 0.29
SDHD-213ENST00000532699 ZNF790Q6PG37 636 aa16.86■□□□□ 0.29
SDHD-213ENST00000532699 BCS1LQ9Y276 419 aa16.86■□□□□ 0.29
SDHD-213ENST00000532699 CARMIL3Q8ND23 1372 aa16.86■□□□□ 0.29
SDHD-213ENST00000532699 CHRNA5P30532 468 aa16.85■□□□□ 0.29
SDHD-213ENST00000532699 LAMB4A4D0S4 1761 aa16.84■□□□□ 0.29
SDHD-213ENST00000532699 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
SDHD-213ENST00000532699 ZNF526Q8TF50 670 aaPredicted RBP16.84■□□□□ 0.29
SDHD-213ENST00000532699 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.28
SDHD-213ENST00000532699 DICER1Q9UPY3 1922 aaKnown RBP16.82■□□□□ 0.28
SDHD-213ENST00000532699 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
SDHD-213ENST00000532699 ZPR1O75312 459 aa16.82■□□□□ 0.28
SDHD-213ENST00000532699 FCHSD2O94868 740 aa16.82■□□□□ 0.28
SDHD-213ENST00000532699 A1BGP04217 495 aa16.82■□□□□ 0.28
SDHD-213ENST00000532699 TEFQ10587 303 aa16.82■□□□□ 0.28
SDHD-213ENST00000532699 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
SDHD-213ENST00000532699 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
SDHD-213ENST00000532699 KIF3CO14782 793 aa16.81■□□□□ 0.28
SDHD-213ENST00000532699 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
SDHD-213ENST00000532699 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
SDHD-213ENST00000532699 DCTN1Q14203 1278 aa16.81■□□□□ 0.28
SDHD-213ENST00000532699 MCM10Q7L590 875 aa16.81■□□□□ 0.28
SDHD-213ENST00000532699 NUP98P52948 1817 aa16.8■□□□□ 0.28
SDHD-213ENST00000532699 SLX4Q8IY92 1834 aa16.8■□□□□ 0.28
SDHD-213ENST00000532699 TTC5Q8N0Z6 440 aa16.8■□□□□ 0.28
SDHD-213ENST00000532699 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
SDHD-213ENST00000532699 GPBP1L1Q9HC44 474 aaPredicted RBP16.8■□□□□ 0.28
SDHD-213ENST00000532699 USP16Q9Y5T5 823 aa16.8■□□□□ 0.28
SDHD-213ENST00000532699 TIAM2Q8IVF5 1701 aa16.79■□□□□ 0.28
SDHD-213ENST00000532699 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
SDHD-213ENST00000532699 PRELPP51888 382 aa16.79■□□□□ 0.28
SDHD-213ENST00000532699 TBC1D9BQ66K14 1250 aa16.79■□□□□ 0.28
SDHD-213ENST00000532699 ARHGAP27Q6ZUM4 889 aa16.79■□□□□ 0.28
SDHD-213ENST00000532699 PIM2Q9P1W9 311 aa16.79■□□□□ 0.28
SDHD-213ENST00000532699 BTBD11A6QL63 1104 aa16.78■□□□□ 0.28
SDHD-213ENST00000532699 STARD3NLO95772 234 aa16.78■□□□□ 0.28
SDHD-213ENST00000532699 SERPINB2P05120 415 aa16.78■□□□□ 0.28
SDHD-213ENST00000532699 PLEKHF1Q96S99 279 aa16.78■□□□□ 0.28
SDHD-213ENST00000532699 TBC1D2BQ9UPU7 963 aa16.78■□□□□ 0.28
SDHD-213ENST00000532699 CAMTA2O94983 1202 aa16.77■□□□□ 0.28
SDHD-213ENST00000532699 FMNL2Q96PY5 1086 aa16.77■□□□□ 0.28
SDHD-213ENST00000532699 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
SDHD-213ENST00000532699 DALRD3Q5D0E6 543 aaKnown RBP16.76■□□□□ 0.27
SDHD-213ENST00000532699 NUDCQ9Y266 331 aa16.76■□□□□ 0.27
SDHD-213ENST00000532699 PCNTO95613 3336 aa16.75■□□□□ 0.27
SDHD-213ENST00000532699 BICDL1Q6ZP65 573 aa16.75■□□□□ 0.27
SDHD-213ENST00000532699 CCDC24Q8N4L8 307 aa16.75■□□□□ 0.27
SDHD-213ENST00000532699 TNRC6CQ9HCJ0 1690 aaKnown RBP16.75■□□□□ 0.27
SDHD-213ENST00000532699 NBPF26B4DH59 902 aa16.74■□□□□ 0.27
SDHD-213ENST00000532699 C9orf131Q5VYM1 1079 aa16.74■□□□□ 0.27
SDHD-213ENST00000532699 NBPF10Q6P3W6 841 aaKnown RBP16.74■□□□□ 0.27
SDHD-213ENST00000532699 NBPF15Q8N660 670 aa16.74■□□□□ 0.27
SDHD-213ENST00000532699 TEX13AQ9BXU3 409 aaPredicted RBP16.74■□□□□ 0.27
SDHD-213ENST00000532699 MIS18AQ9NYP9 233 aa16.74■□□□□ 0.27
SDHD-213ENST00000532699 RASSF7Q02833 373 aa16.73■□□□□ 0.27
SDHD-213ENST00000532699 PRR5LQ6MZQ0 368 aa16.73■□□□□ 0.27
SDHD-213ENST00000532699 NMRK2Q9NPI5 230 aa16.73■□□□□ 0.27
SDHD-213ENST00000532699 A0A087WZG4 1122 aa16.72■□□□□ 0.27
SDHD-213ENST00000532699 HTATSF1O43719 755 aaKnown RBP16.72■□□□□ 0.27
SDHD-213ENST00000532699 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
SDHD-213ENST00000532699 C2CD5Q86YS7 1000 aa16.71■□□□□ 0.27
SDHD-213ENST00000532699 THUMPD2Q9BTF0 503 aaKnown RBP16.71■□□□□ 0.27
SDHD-213ENST00000532699 NFKBIEO00221 500 aa16.69■□□□□ 0.26
SDHD-213ENST00000532699 SNRPA1P09661 255 aaKnown RBP16.69■□□□□ 0.26
SDHD-213ENST00000532699 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
SDHD-213ENST00000532699 DZIP3Q86Y13 1208 aaKnown RBP16.69■□□□□ 0.26
SDHD-213ENST00000532699 RTF1Q92541 710 aaKnown RBP16.69■□□□□ 0.26
SDHD-213ENST00000532699 RNF181Q9P0P0 153 aa16.69■□□□□ 0.26
SDHD-213ENST00000532699 WDR90Q96KV7 1748 aa16.69■□□□□ 0.26
SDHD-213ENST00000532699 HSPA6P17066 643 aa16.68■□□□□ 0.26
SDHD-213ENST00000532699 NFE2L2Q16236 605 aa16.67■□□□□ 0.26
SDHD-213ENST00000532699 TTLL6Q8N841 843 aa16.67■□□□□ 0.26
SDHD-213ENST00000532699 BRIP1Q9BX63 1249 aa16.67■□□□□ 0.26
SDHD-213ENST00000532699 HLFQ16534 295 aa16.66■□□□□ 0.26
SDHD-213ENST00000532699 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
SDHD-213ENST00000532699 LAMB2P55268 1798 aa16.65■□□□□ 0.26
SDHD-213ENST00000532699 H0YIN7 160 aa16.65■□□□□ 0.26
SDHD-213ENST00000532699 EIF4A1P60842 406 aaKnown RBP16.65■□□□□ 0.26
SDHD-213ENST00000532699 SETDB2Q96T68 719 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms