RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 YBX3P16989 372 aaKnown RBP eCLIP30.36■■■□□ 2.453e-10■■□□□ 12.8
PPP1CA-207ENST00000532279 COL15A1P39059 1388 aa30.36■■■□□ 2.45
PPP1CA-207ENST00000532279 ZPR1O75312 459 aa30.35■■■□□ 2.45
PPP1CA-207ENST00000532279 FKBP8Q14318 412 aa30.35■■■□□ 2.45
PPP1CA-207ENST00000532279 PNNQ9H307 717 aaKnown RBP30.35■■■□□ 2.45
PPP1CA-207ENST00000532279 PARP3Q9Y6F1 533 aa30.35■■■□□ 2.45
PPP1CA-207ENST00000532279 MAPK8IP3Q9UPT6 1336 aa30.35■■■□□ 2.45
PPP1CA-207ENST00000532279 KIF13BQ9NQT8 1826 aa30.35■■■□□ 2.45
PPP1CA-207ENST00000532279 WWC3Q9ULE0 1092 aa30.34■■■□□ 2.45
PPP1CA-207ENST00000532279 USPL1Q5W0Q7 1092 aa30.33■■■□□ 2.45
PPP1CA-207ENST00000532279 TEX13AQ9BXU3 409 aaPredicted RBP30.33■■■□□ 2.45
PPP1CA-207ENST00000532279 NFE2L2Q16236 605 aa30.32■■■□□ 2.44
PPP1CA-207ENST00000532279 N4BP2Q86UW6 1770 aaPredicted RBP30.31■■■□□ 2.44
PPP1CA-207ENST00000532279 NARFQ9UHQ1 456 aa30.29■■■□□ 2.44
PPP1CA-207ENST00000532279 ZNF330Q9Y3S2 320 aaPredicted RBP30.29■■■□□ 2.44
PPP1CA-207ENST00000532279 C10orf71Q711Q0 1435 aa30.29■■■□□ 2.44
PPP1CA-207ENST00000532279 KIAA1551Q9HCM1 1747 aa30.28■■■□□ 2.44
PPP1CA-207ENST00000532279 TAF7Q15545 349 aaPredicted RBP30.28■■■□□ 2.44
PPP1CA-207ENST00000532279 UTRNP46939 3433 aa30.27■■■□□ 2.44
PPP1CA-207ENST00000532279 GRIN3BO60391 1043 aa30.27■■■□□ 2.44
PPP1CA-207ENST00000532279 DDR1Q08345 913 aa30.27■■■□□ 2.44
PPP1CA-207ENST00000532279 THUMPD2Q9BTF0 503 aaKnown RBP30.27■■■□□ 2.44
PPP1CA-207ENST00000532279 PRKRIP1Q9H875 184 aaPredicted RBP30.27■■■□□ 2.44
PPP1CA-207ENST00000532279 MIS18AQ9NYP9 233 aa30.27■■■□□ 2.44
PPP1CA-207ENST00000532279 PRAMEF22A3QJZ6 481 aa30.26■■■□□ 2.43
PPP1CA-207ENST00000532279 A1BGP04217 495 aa30.26■■■□□ 2.43
PPP1CA-207ENST00000532279 EIF5P55010 431 aaKnown RBP30.26■■■□□ 2.43
PPP1CA-207ENST00000532279 PXDNLA1KZ92 1463 aa30.25■■■□□ 2.43
PPP1CA-207ENST00000532279 USP16Q9Y5T5 823 aa30.25■■■□□ 2.43
PPP1CA-207ENST00000532279 KDM3BQ7LBC6 1761 aa30.24■■■□□ 2.43
PPP1CA-207ENST00000532279 A0A087WZG4 1122 aa30.23■■■□□ 2.43
PPP1CA-207ENST00000532279 SNRPA1P09661 255 aaKnown RBP30.23■■■□□ 2.43
PPP1CA-207ENST00000532279 TM4SF1P30408 202 aa30.23■■■□□ 2.43
PPP1CA-207ENST00000532279 BCL2L12Q9HB09 334 aa30.23■■■□□ 2.43
PPP1CA-207ENST00000532279 AFDNP55196 1824 aaKnown RBP30.23■■■□□ 2.43
PPP1CA-207ENST00000532279 GOLGB1Q14789 3259 aaKnown RBP30.22■■■□□ 2.43
PPP1CA-207ENST00000532279 POLRMTO00411 1230 aaKnown RBP30.22■■■□□ 2.43
PPP1CA-207ENST00000532279 TGFB2P61812 414 aa30.22■■■□□ 2.43
PPP1CA-207ENST00000532279 WDR43Q15061 677 aaKnown RBP eCLIP30.22■■■□□ 2.43
PPP1CA-207ENST00000532279 CCDC146Q8IYE0 955 aa30.22■■■□□ 2.43
PPP1CA-207ENST00000532279 SCN7AQ01118 1682 aa30.21■■■□□ 2.43
PPP1CA-207ENST00000532279 A0A0G2JLW4 131 aa30.21■■■□□ 2.43
PPP1CA-207ENST00000532279 IL6STP40189 918 aaPredicted RBP30.21■■■□□ 2.43
PPP1CA-207ENST00000532279 PIP4K2AP48426 406 aaPredicted RBP30.21■■■□□ 2.43
PPP1CA-207ENST00000532279 RIPK4P57078 832 aa30.21■■■□□ 2.43
PPP1CA-207ENST00000532279 NFIXQ14938 502 aa30.21■■■□□ 2.43
PPP1CA-207ENST00000532279 NPM2Q86SE8 214 aaKnown RBP30.21■■■□□ 2.43
PPP1CA-207ENST00000532279 TBC1D2BQ9UPU7 963 aa30.2■■■□□ 2.43
PPP1CA-207ENST00000532279 PNISRQ8TF01 805 aaKnown RBP30.19■■■□□ 2.42
PPP1CA-207ENST00000532279 LAMB4A4D0S4 1761 aa30.18■■■□□ 2.42
PPP1CA-207ENST00000532279 DPEP1P16444 411 aa30.18■■■□□ 2.42
PPP1CA-207ENST00000532279 BRCA1P38398 1863 aaKnown RBP30.17■■■□□ 2.42
PPP1CA-207ENST00000532279 TMPOP42166 694 aaKnown RBP30.17■■■□□ 2.42
PPP1CA-207ENST00000532279 BICDL1Q6ZP65 573 aa30.17■■■□□ 2.42
PPP1CA-207ENST00000532279 ZNF784Q8NCA9 323 aaPredicted RBP30.17■■■□□ 2.42
PPP1CA-207ENST00000532279 RRP7AQ9Y3A4 280 aaKnown RBP30.17■■■□□ 2.42
PPP1CA-207ENST00000532279 ADAMTS8Q9UP79 889 aa30.15■■■□□ 2.42
PPP1CA-207ENST00000532279 NRXN2Q9P2S2 1712 aa30.15■■■□□ 2.42
PPP1CA-207ENST00000532279 BCORQ6W2J9 1755 aa30.15■■■□□ 2.42
PPP1CA-207ENST00000532279 NEUROD2Q15784 382 aa30.14■■■□□ 2.42
PPP1CA-207ENST00000532279 BCS1LQ9Y276 419 aa30.14■■■□□ 2.42
PPP1CA-207ENST00000532279 TBC1D9BQ66K14 1250 aa30.13■■■□□ 2.41
PPP1CA-207ENST00000532279 RUNDC1Q96C34 613 aa30.13■■■□□ 2.41
PPP1CA-207ENST00000532279 SERPINB2P05120 415 aa30.12■■■□□ 2.41
PPP1CA-207ENST00000532279 LMOD3Q0VAK6 560 aa30.12■■■□□ 2.41
PPP1CA-207ENST00000532279 DZIP3Q86Y13 1208 aaKnown RBP30.12■■■□□ 2.41
PPP1CA-207ENST00000532279 ZNF316A6NFI3 1004 aaPredicted RBP30.11■■■□□ 2.41
PPP1CA-207ENST00000532279 EIF4A1P60842 406 aaKnown RBP30.11■■■□□ 2.41
PPP1CA-207ENST00000532279 CAMTA2O94983 1202 aa30.1■■■□□ 2.41
PPP1CA-207ENST00000532279 TSPYL4Q9UJ04 414 aa30.1■■■□□ 2.41
PPP1CA-207ENST00000532279 NBPF26B4DH59 902 aa30.09■■■□□ 2.41
PPP1CA-207ENST00000532279 GIGYF1O75420 1035 aaPredicted RBP30.09■■■□□ 2.41
PPP1CA-207ENST00000532279 KCNA3P22001 575 aa30.09■■■□□ 2.41
PPP1CA-207ENST00000532279 CHRNA5P30532 468 aa30.09■■■□□ 2.41
PPP1CA-207ENST00000532279 NBPF10Q6P3W6 841 aaKnown RBP30.09■■■□□ 2.41
PPP1CA-207ENST00000532279 NBPF15Q8N660 670 aa30.09■■■□□ 2.41
PPP1CA-207ENST00000532279 ARFGEF1Q9Y6D6 1849 aa30.07■■■□□ 2.4
PPP1CA-207ENST00000532279 PIM2Q9P1W9 311 aa30.06■■■□□ 2.4
PPP1CA-207ENST00000532279 CARMIL3Q8ND23 1372 aa30.04■■■□□ 2.4
PPP1CA-207ENST00000532279 SETDB2Q96T68 719 aa30.03■■■□□ 2.4
PPP1CA-207ENST00000532279 ANKRD31Q8N7Z5 1873 aa30.02■■■□□ 2.4
PPP1CA-207ENST00000532279 DALRD3Q5D0E6 543 aaKnown RBP30.02■■■□□ 2.4
PPP1CA-207ENST00000532279 NGEFQ8N5V2 710 aa30.02■■■□□ 2.4
PPP1CA-207ENST00000532279 TRIM35Q9UPQ4 493 aa30.02■■■□□ 2.4
PPP1CA-207ENST00000532279 DLEC1Q9Y238 1755 aa30.02■■■□□ 2.4
PPP1CA-207ENST00000532279 ARHGAP27Q6ZUM4 889 aa30.01■■■□□ 2.39
PPP1CA-207ENST00000532279 CCDC24Q8N4L8 307 aa30.01■■■□□ 2.39
PPP1CA-207ENST00000532279 ZNF652Q9Y2D9 606 aa30.01■■■□□ 2.39
PPP1CA-207ENST00000532279 NPHP1O15259 732 aa30■■■□□ 2.39
PPP1CA-207ENST00000532279 BABAM1Q9NWV8 329 aa30■■■□□ 2.39
PPP1CA-207ENST00000532279 LAS1LQ9Y4W2 734 aaKnown RBP30■■■□□ 2.39
PPP1CA-207ENST00000532279 PRR5LQ6MZQ0 368 aa29.99■■■□□ 2.39
PPP1CA-207ENST00000532279 MYL6BP14649 208 aa29.98■■■□□ 2.39
PPP1CA-207ENST00000532279 CCDC184Q52MB2 194 aa29.98■■■□□ 2.39
PPP1CA-207ENST00000532279 CLEC4GQ6UXB4 293 aa29.98■■■□□ 2.39
PPP1CA-207ENST00000532279 C2CD5Q86YS7 1000 aa29.98■■■□□ 2.39
PPP1CA-207ENST00000532279 ATP10DQ9P241 1426 aa29.97■■■□□ 2.39
PPP1CA-207ENST00000532279 CNBD1Q8NA66 436 aa29.97■■■□□ 2.39
PPP1CA-207ENST00000532279 EIF2S2P20042 333 aaKnown RBP29.96■■■□□ 2.39
PPP1CA-207ENST00000532279 NUP98P52948 1817 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms