RNA–Protein interactions for RNA: ENST00000531333.5

CASP4-209, Transcript of caspase 4, humanhuman

TSL 4

Gene CASP4, Length 667 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-209ENST00000531333 PIK3R2O00459 728 aa11.52□□□□□ -0.57
CASP4-209ENST00000531333 GDF10P55107 478 aa11.52□□□□□ -0.57
CASP4-209ENST00000531333 CD163Q86VB7 1156 aa11.52□□□□□ -0.57
CASP4-209ENST00000531333 KLF15Q9UIH9 416 aa11.52□□□□□ -0.57
CASP4-209ENST00000531333 NIFKQ9BYG3 293 aaKnown RBP11.51□□□□□ -0.57
CASP4-209ENST00000531333 ATXN7O15265 892 aaPredicted RBP11.5□□□□□ -0.57
CASP4-209ENST00000531333 SMTNP53814 917 aa11.5□□□□□ -0.57
CASP4-209ENST00000531333 FAM182BQ5T319 152 aa11.5□□□□□ -0.57
CASP4-209ENST00000531333 TNP2Q05952 138 aa11.49□□□□□ -0.57
CASP4-209ENST00000531333 Q8N3U1 123 aa11.49□□□□□ -0.57
CASP4-209ENST00000531333 MAPTP10636 758 aaKnown RBP11.48□□□□□ -0.57
CASP4-209ENST00000531333 CHRNA4P43681 627 aa11.48□□□□□ -0.57
CASP4-209ENST00000531333 CHSY3Q70JA7 882 aa11.48□□□□□ -0.57
CASP4-209ENST00000531333 AIDAQ96BJ3 306 aa11.48□□□□□ -0.57
CASP4-209ENST00000531333 NOP53Q9NZM5 478 aaKnown RBP11.48□□□□□ -0.57
CASP4-209ENST00000531333 A0A1W2PNR3 127 aa11.47□□□□□ -0.57
CASP4-209ENST00000531333 ADH6P28332 368 aa11.47□□□□□ -0.57
CASP4-209ENST00000531333 VAC14Q08AM6 782 aa11.47□□□□□ -0.57
CASP4-209ENST00000531333 FCHSD1Q86WN1 690 aa11.47□□□□□ -0.57
CASP4-209ENST00000531333 PRM3Q9NNZ6 103 aa11.47□□□□□ -0.57
CASP4-209ENST00000531333 AVENQ9NQS1 362 aaPredicted RBP11.47□□□□□ -0.57
CASP4-209ENST00000531333 IQSEC3Q9UPP2 1182 aaPredicted RBP11.47□□□□□ -0.57
CASP4-209ENST00000531333 DCDC2BA2VCK2 349 aa11.46□□□□□ -0.57
CASP4-209ENST00000531333 CD33P20138 364 aa11.46□□□□□ -0.57
CASP4-209ENST00000531333 MAP7D1Q3KQU3 841 aa11.46□□□□□ -0.57
CASP4-209ENST00000531333 SLC4A9Q96Q91 983 aa11.46□□□□□ -0.57
CASP4-209ENST00000531333 TMEM229AB2RXF0 380 aa11.45□□□□□ -0.58
CASP4-209ENST00000531333 MTFR1Q15390 333 aa11.45□□□□□ -0.58
CASP4-209ENST00000531333 PLPP7Q8NBV4 271 aa11.45□□□□□ -0.58
CASP4-209ENST00000531333 ITGB7P26010 798 aa11.44□□□□□ -0.58
CASP4-209ENST00000531333 ARSJQ5FYB0 599 aaPredicted RBP11.44□□□□□ -0.58
CASP4-209ENST00000531333 USP3Q9Y6I4 520 aa11.44□□□□□ -0.58
CASP4-209ENST00000531333 CDK2AP1O14519 115 aa11.43□□□□□ -0.58
CASP4-209ENST00000531333 NBPF1Q3BBV0 1214 aa11.43□□□□□ -0.58
CASP4-209ENST00000531333 ZIC5Q96T25 663 aa11.43□□□□□ -0.58
CASP4-209ENST00000531333 ZDHHC3Q9NYG2 299 aa11.43□□□□□ -0.58
CASP4-209ENST00000531333 SERTAD1Q9UHV2 236 aa11.43□□□□□ -0.58
CASP4-209ENST00000531333 A6NJY4 79 aa11.42□□□□□ -0.58
CASP4-209ENST00000531333 KHNYNO15037 678 aaKnown RBP11.42□□□□□ -0.58
CASP4-209ENST00000531333 FAM157BP0CG42 384 aa11.42□□□□□ -0.58
CASP4-209ENST00000531333 ZNF468Q5VIY5 522 aaPredicted RBP11.41□□□□□ -0.58
CASP4-209ENST00000531333 TRIM11Q96F44 468 aa11.41□□□□□ -0.58
CASP4-209ENST00000531333 PCBP4P57723 403 aaKnown RBP11.4□□□□□ -0.58
CASP4-209ENST00000531333 GDPD2Q9HCC8 539 aa11.4□□□□□ -0.58
CASP4-209ENST00000531333 TATP17735 454 aaPredicted RBP11.39□□□□□ -0.59
CASP4-209ENST00000531333 SAMD5Q5TGI4 173 aa11.39□□□□□ -0.59
CASP4-209ENST00000531333 KRTAP4-8Q9BYQ9 185 aa11.39□□□□□ -0.59
CASP4-209ENST00000531333 STRN4Q9NRL3 753 aa11.39□□□□□ -0.59
CASP4-209ENST00000531333 PCDHGA11Q9Y5H2 935 aa11.39□□□□□ -0.59
CASP4-209ENST00000531333 EFSO43281 561 aa11.38□□□□□ -0.59
CASP4-209ENST00000531333 WASHC4Q2M389 1173 aa11.37□□□□□ -0.59
CASP4-209ENST00000531333 MDFIQ99750 246 aa11.37□□□□□ -0.59
CASP4-209ENST00000531333 PLVAPQ9BX97 442 aa11.37□□□□□ -0.59
CASP4-209ENST00000531333 CABP1Q9NZU7 370 aa11.37□□□□□ -0.59
CASP4-209ENST00000531333 ABL2P42684 1182 aa11.36□□□□□ -0.59
CASP4-209ENST00000531333 LAMC2Q13753 1193 aa11.36□□□□□ -0.59
CASP4-209ENST00000531333 DOC2BQ14184 412 aa11.36□□□□□ -0.59
CASP4-209ENST00000531333 MARK1Q9P0L2 795 aa11.36□□□□□ -0.59
CASP4-209ENST00000531333 PRR12Q9ULL5 1215 aa11.36□□□□□ -0.59
CASP4-209ENST00000531333 SEMA3FQ13275 785 aa11.35□□□□□ -0.59
CASP4-209ENST00000531333 PARP3Q9Y6F1 533 aa11.35□□□□□ -0.59
CASP4-209ENST00000531333 SPATA31C1P0DKV0 1188 aa11.34□□□□□ -0.59
CASP4-209ENST00000531333 SOX11P35716 441 aa11.34□□□□□ -0.59
CASP4-209ENST00000531333 SEMA6BQ9H3T3 888 aa11.34□□□□□ -0.59
CASP4-209ENST00000531333 GJA3Q9Y6H8 435 aa11.34□□□□□ -0.59
CASP4-209ENST00000531333 ELOA3CA0A087WX78 387 aaPredicted RBP11.33□□□□□ -0.6
CASP4-209ENST00000531333 ELOA3DA6NLF2 546 aaPredicted RBP11.33□□□□□ -0.6
CASP4-209ENST00000531333 PIK3CDO00329 1044 aa11.33□□□□□ -0.6
CASP4-209ENST00000531333 TXLNAP40222 546 aa11.33□□□□□ -0.6
CASP4-209ENST00000531333 ELOA3BQ3SY89 546 aa11.33□□□□□ -0.6
CASP4-209ENST00000531333 ELOA3Q8NG57 546 aa11.33□□□□□ -0.6
CASP4-209ENST00000531333 ZDHHC1Q8WTX9 485 aa11.33□□□□□ -0.6
CASP4-209ENST00000531333 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
CASP4-209ENST00000531333 SCHIP1Q9P0W5 487 aaPredicted RBP11.32□□□□□ -0.6
CASP4-209ENST00000531333 GATA4P43694 442 aa11.31□□□□□ -0.6
CASP4-209ENST00000531333 BACH1O14867 736 aa11.3□□□□□ -0.6
CASP4-209ENST00000531333 C7orf43Q8WVR3 580 aa11.3□□□□□ -0.6
CASP4-209ENST00000531333 TEAD4Q15561 434 aa11.29□□□□□ -0.6
CASP4-209ENST00000531333 SYT9Q86SS6 491 aa11.29□□□□□ -0.6
CASP4-209ENST00000531333 L3MBTL2Q969R5 705 aa11.29□□□□□ -0.6
CASP4-209ENST00000531333 EML1O00423 815 aa11.28□□□□□ -0.6
CASP4-209ENST00000531333 SIN3BO75182 1162 aa11.28□□□□□ -0.6
CASP4-209ENST00000531333 EPHA4P54764 986 aa11.28□□□□□ -0.6
CASP4-209ENST00000531333 COL9A3Q14050 684 aaPredicted RBP11.28□□□□□ -0.6
CASP4-209ENST00000531333 ZNF358Q9NW07 568 aa11.28□□□□□ -0.6
CASP4-209ENST00000531333 ADARB2-AS1A8MUL3 147 aa11.27□□□□□ -0.61
CASP4-209ENST00000531333 ALAS2P22557 587 aa11.27□□□□□ -0.61
CASP4-209ENST00000531333 RSPO4Q2I0M5 234 aaPredicted RBP11.27□□□□□ -0.61
CASP4-209ENST00000531333 EML3Q32P44 896 aa11.27□□□□□ -0.61
CASP4-209ENST00000531333 LRRC69Q6ZNQ3 347 aa11.27□□□□□ -0.61
CASP4-209ENST00000531333 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
CASP4-209ENST00000531333 NOS2P35228 1153 aa11.26□□□□□ -0.61
CASP4-209ENST00000531333 GTF2IP78347 998 aa11.26□□□□□ -0.61
CASP4-209ENST00000531333 NOD1Q9Y239 953 aa11.26□□□□□ -0.61
CASP4-209ENST00000531333 LZTS3O60299 673 aaPredicted RBP11.25□□□□□ -0.61
CASP4-209ENST00000531333 NKAPLQ5M9Q1 402 aa11.25□□□□□ -0.61
CASP4-209ENST00000531333 SPDYE3A6NKU9 549 aa11.24□□□□□ -0.61
CASP4-209ENST00000531333 SKIP12755 728 aa11.24□□□□□ -0.61
CASP4-209ENST00000531333 MCM6Q14566 821 aa11.24□□□□□ -0.61
CASP4-209ENST00000531333 ZMYM1Q5SVZ6 1142 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms