RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 PRKRIP1Q9H875 184 aaPredicted RBP14.5□□□□□ -0.09
CAPN1-221ENST00000531068 SNRPA1P09661 255 aaKnown RBP14.49□□□□□ -0.09
CAPN1-221ENST00000531068 EIF5P55010 431 aaKnown RBP14.49□□□□□ -0.09
CAPN1-221ENST00000531068 ZNF831Q5JPB2 1677 aa14.49□□□□□ -0.09
CAPN1-221ENST00000531068 KCNQ3O43525 872 aa14.48□□□□□ -0.09
CAPN1-221ENST00000531068 YBX3P16989 372 aaKnown RBP eCLIP14.48□□□□□ -0.093e-6■□□□□ 8.1
CAPN1-221ENST00000531068 TM4SF1P30408 202 aa14.48□□□□□ -0.09
CAPN1-221ENST00000531068 IL6STP40189 918 aaPredicted RBP14.48□□□□□ -0.09
CAPN1-221ENST00000531068 CCER2I3L3R5 266 aa14.47□□□□□ -0.09
CAPN1-221ENST00000531068 WDR43Q15061 677 aaKnown RBP eCLIP14.47□□□□□ -0.09
CAPN1-221ENST00000531068 TAF1LQ8IZX4 1826 aa14.47□□□□□ -0.09
CAPN1-221ENST00000531068 COL15A1P39059 1388 aa14.47□□□□□ -0.09
CAPN1-221ENST00000531068 KCPQ6ZWJ8 1503 aa14.46□□□□□ -0.09
CAPN1-221ENST00000531068 ANP32CO43423 234 aa14.46□□□□□ -0.09
CAPN1-221ENST00000531068 LMOD3Q0VAK6 560 aa14.46□□□□□ -0.09
CAPN1-221ENST00000531068 ZNF330Q9Y3S2 320 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-221ENST00000531068 USP16Q9Y5T5 823 aa14.46□□□□□ -0.09
CAPN1-221ENST00000531068 COL24A1Q17RW2 1714 aa14.46□□□□□ -0.1
CAPN1-221ENST00000531068 A0A0G2JLW4 131 aa14.45□□□□□ -0.1
CAPN1-221ENST00000531068 POLRMTO00411 1230 aaKnown RBP14.45□□□□□ -0.1
CAPN1-221ENST00000531068 A1BGP04217 495 aa14.45□□□□□ -0.1
CAPN1-221ENST00000531068 RIPK4P57078 832 aa14.45□□□□□ -0.1
CAPN1-221ENST00000531068 TUBGCP6Q96RT7 1819 aa14.45□□□□□ -0.1
CAPN1-221ENST00000531068 SCN11AQ9UI33 1791 aa14.45□□□□□ -0.1
CAPN1-221ENST00000531068 DDR1Q08345 913 aa14.44□□□□□ -0.1
CAPN1-221ENST00000531068 NFIXQ14938 502 aa14.44□□□□□ -0.1
CAPN1-221ENST00000531068 MIS18AQ9NYP9 233 aa14.44□□□□□ -0.1
CAPN1-221ENST00000531068 ADAMTS7Q9UKP4 1686 aa14.44□□□□□ -0.1
CAPN1-221ENST00000531068 UBR3Q6ZT12 1888 aa14.44□□□□□ -0.1
CAPN1-221ENST00000531068 DPEP1P16444 411 aa14.43□□□□□ -0.1
CAPN1-221ENST00000531068 TMPOP42166 694 aaKnown RBP14.43□□□□□ -0.1
CAPN1-221ENST00000531068 ZNF784Q8NCA9 323 aaPredicted RBP14.43□□□□□ -0.1
CAPN1-221ENST00000531068 RUNDC1Q96C34 613 aa14.43□□□□□ -0.1
CAPN1-221ENST00000531068 BCL2L12Q9HB09 334 aa14.43□□□□□ -0.1
CAPN1-221ENST00000531068 BABAM1Q9NWV8 329 aa14.43□□□□□ -0.1
CAPN1-221ENST00000531068 TBC1D2BQ9UPU7 963 aa14.43□□□□□ -0.1
CAPN1-221ENST00000531068 SERPINB2P05120 415 aa14.42□□□□□ -0.1
CAPN1-221ENST00000531068 PIM2Q9P1W9 311 aa14.42□□□□□ -0.1
CAPN1-221ENST00000531068 EIF4A1P60842 406 aaKnown RBP14.41□□□□□ -0.1
CAPN1-221ENST00000531068 CLEC4GQ6UXB4 293 aa14.41□□□□□ -0.1
CAPN1-221ENST00000531068 DZIP3Q86Y13 1208 aaKnown RBP14.41□□□□□ -0.1
CAPN1-221ENST00000531068 THUMPD2Q9BTF0 503 aaKnown RBP14.41□□□□□ -0.1
CAPN1-221ENST00000531068 WWC3Q9ULE0 1092 aa14.41□□□□□ -0.1
CAPN1-221ENST00000531068 ADAMTS8Q9UP79 889 aa14.41□□□□□ -0.1
CAPN1-221ENST00000531068 BCS1LQ9Y276 419 aa14.41□□□□□ -0.1
CAPN1-221ENST00000531068 C10orf71Q711Q0 1435 aa14.41□□□□□ -0.1
CAPN1-221ENST00000531068 PRAMEF22A3QJZ6 481 aa14.4□□□□□ -0.1
CAPN1-221ENST00000531068 GIGYF1O75420 1035 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-221ENST00000531068 BICDL1Q6ZP65 573 aa14.4□□□□□ -0.1
CAPN1-221ENST00000531068 SETDB2Q96T68 719 aa14.4□□□□□ -0.1
CAPN1-221ENST00000531068 ZNF652Q9Y2D9 606 aa14.4□□□□□ -0.1
CAPN1-221ENST00000531068 RGL2O15211 777 aa14.39□□□□□ -0.11
CAPN1-221ENST00000531068 CAMTA2O94983 1202 aa14.39□□□□□ -0.11
CAPN1-221ENST00000531068 KCNA3P22001 575 aa14.39□□□□□ -0.11
CAPN1-221ENST00000531068 CCDC184Q52MB2 194 aa14.39□□□□□ -0.11
CAPN1-221ENST00000531068 DALRD3Q5D0E6 543 aaKnown RBP14.39□□□□□ -0.11
CAPN1-221ENST00000531068 TBC1D9BQ66K14 1250 aa14.39□□□□□ -0.11
CAPN1-221ENST00000531068 CCDC146Q8IYE0 955 aa14.39□□□□□ -0.11
CAPN1-221ENST00000531068 TSPYL4Q9UJ04 414 aa14.39□□□□□ -0.11
CAPN1-221ENST00000531068 PDZRN3Q9UPQ7 1066 aa14.39□□□□□ -0.11
CAPN1-221ENST00000531068 CICQ96RK0 1608 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-221ENST00000531068 COL5A3P25940 1745 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-221ENST00000531068 NEUROD2Q15784 382 aa14.38□□□□□ -0.11
CAPN1-221ENST00000531068 ARHGAP27Q6ZUM4 889 aa14.38□□□□□ -0.11
CAPN1-221ENST00000531068 PXDNLA1KZ92 1463 aa14.38□□□□□ -0.11
CAPN1-221ENST00000531068 NBPF26B4DH59 902 aa14.37□□□□□ -0.11
CAPN1-221ENST00000531068 NPHP1O15259 732 aa14.37□□□□□ -0.11
CAPN1-221ENST00000531068 PIP4K2AP48426 406 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-221ENST00000531068 NBPF10Q6P3W6 841 aaKnown RBP14.37□□□□□ -0.11
CAPN1-221ENST00000531068 NBPF15Q8N660 670 aa14.37□□□□□ -0.11
CAPN1-221ENST00000531068 RRP7AQ9Y3A4 280 aaKnown RBP14.37□□□□□ -0.11
CAPN1-221ENST00000531068 TJP1Q07157 1748 aa14.37□□□□□ -0.11
CAPN1-221ENST00000531068 H0YIN7 160 aa14.36□□□□□ -0.11
CAPN1-221ENST00000531068 CHRNA5P30532 468 aa14.36□□□□□ -0.11
CAPN1-221ENST00000531068 PDE6BP35913 854 aa14.36□□□□□ -0.11
CAPN1-221ENST00000531068 BRIP1Q9BX63 1249 aa14.36□□□□□ -0.11
CAPN1-221ENST00000531068 MYH14Q7Z406 1995 aaKnown RBP14.36□□□□□ -0.11
CAPN1-221ENST00000531068 CARMIL3Q8ND23 1372 aa14.35□□□□□ -0.11
CAPN1-221ENST00000531068 C2CD5Q86YS7 1000 aa14.35□□□□□ -0.11
CAPN1-221ENST00000531068 ERBB4Q15303 1308 aa14.35□□□□□ -0.11
CAPN1-221ENST00000531068 ERVV-1B6SEH8 477 aa14.34□□□□□ -0.11
CAPN1-221ENST00000531068 CHL1O00533 1208 aa14.34□□□□□ -0.11
CAPN1-221ENST00000531068 ST5P78524 1137 aa14.34□□□□□ -0.11
CAPN1-221ENST00000531068 TPTE2Q6XPS3 522 aa14.34□□□□□ -0.11
CAPN1-221ENST00000531068 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
CAPN1-221ENST00000531068 CNBD1Q8NA66 436 aa14.34□□□□□ -0.11
CAPN1-221ENST00000531068 TRIM35Q9UPQ4 493 aa14.34□□□□□ -0.11
CAPN1-221ENST00000531068 C4AP0C0L4 1744 aa14.33□□□□□ -0.12
CAPN1-221ENST00000531068 CALD1Q05682 793 aaKnown RBP14.33□□□□□ -0.12
CAPN1-221ENST00000531068 PRR5LQ6MZQ0 368 aa14.33□□□□□ -0.12
CAPN1-221ENST00000531068 KIF6Q6ZMV9 814 aa14.33□□□□□ -0.12
CAPN1-221ENST00000531068 NBPF5PQ86XG9 351 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-221ENST00000531068 TTLL6Q8N841 843 aa14.33□□□□□ -0.12
CAPN1-221ENST00000531068 LAS1LQ9Y4W2 734 aaKnown RBP14.33□□□□□ -0.12
CAPN1-221ENST00000531068 UTRNP46939 3433 aa14.33□□□□□ -0.12
CAPN1-221ENST00000531068 MYL6BP14649 208 aa14.32□□□□□ -0.12
CAPN1-221ENST00000531068 NIP7Q9Y221 180 aaKnown RBP eCLIP14.32□□□□□ -0.12
CAPN1-221ENST00000531068 UBR2Q8IWV8 1755 aa14.32□□□□□ -0.12
CAPN1-221ENST00000531068 EIF2S2P20042 333 aaKnown RBP14.31□□□□□ -0.12
CAPN1-221ENST00000531068 GTF2E1P29083 439 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms