RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 DCAF8L1A6NGE4 600 aa25.1■■□□□ 1.61
UBXN1-211ENST00000531056 STARD3NLO95772 234 aa25.1■■□□□ 1.61
UBXN1-211ENST00000531056 MMP10P09238 476 aa25.1■■□□□ 1.61
UBXN1-211ENST00000531056 WDR43Q15061 677 aaKnown RBP eCLIP25.1■■□□□ 1.61
UBXN1-211ENST00000531056 TAF7Q15545 349 aaPredicted RBP25.1■■□□□ 1.61
UBXN1-211ENST00000531056 CD2APQ9Y5K6 639 aa25.1■■□□□ 1.61
UBXN1-211ENST00000531056 LAMB4A4D0S4 1761 aa25.09■■□□□ 1.61
UBXN1-211ENST00000531056 THUMPD2Q9BTF0 503 aaKnown RBP25.08■■□□□ 1.61
UBXN1-211ENST00000531056 SCN7AQ01118 1682 aa25.07■■□□□ 1.6
UBXN1-211ENST00000531056 KIAA1551Q9HCM1 1747 aa25.07■■□□□ 1.6
UBXN1-211ENST00000531056 TMPOP42166 694 aaKnown RBP25.07■■□□□ 1.6
UBXN1-211ENST00000531056 CCDC146Q8IYE0 955 aa25.07■■□□□ 1.6
UBXN1-211ENST00000531056 ADAMTS8Q9UP79 889 aa25.07■■□□□ 1.6
UBXN1-211ENST00000531056 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
UBXN1-211ENST00000531056 RIPK4P57078 832 aa25.06■■□□□ 1.6
UBXN1-211ENST00000531056 FKBP8Q14318 412 aa25.06■■□□□ 1.6
UBXN1-211ENST00000531056 PRAMEF22A3QJZ6 481 aa25.05■■□□□ 1.6
UBXN1-211ENST00000531056 EIF5P55010 431 aaKnown RBP25.05■■□□□ 1.6
UBXN1-211ENST00000531056 PNISRQ8TF01 805 aaKnown RBP25.05■■□□□ 1.6
UBXN1-211ENST00000531056 RUNDC1Q96C34 613 aa25.05■■□□□ 1.6
UBXN1-211ENST00000531056 MIS18AQ9NYP9 233 aa25.05■■□□□ 1.6
UBXN1-211ENST00000531056 C10orf71Q711Q0 1435 aa25.04■■□□□ 1.6
UBXN1-211ENST00000531056 USPL1Q5W0Q7 1092 aa25.04■■□□□ 1.6
UBXN1-211ENST00000531056 NARFQ9UHQ1 456 aa25.04■■□□□ 1.6
UBXN1-211ENST00000531056 USP16Q9Y5T5 823 aa25.04■■□□□ 1.6
UBXN1-211ENST00000531056 ZPR1O75312 459 aa25.03■■□□□ 1.6
UBXN1-211ENST00000531056 SNRPA1P09661 255 aaKnown RBP25.03■■□□□ 1.6
UBXN1-211ENST00000531056 BCORQ6W2J9 1755 aa25.03■■□□□ 1.6
UBXN1-211ENST00000531056 A1BGP04217 495 aa25.02■■□□□ 1.6
UBXN1-211ENST00000531056 IL6STP40189 918 aaPredicted RBP25.01■■□□□ 1.59
UBXN1-211ENST00000531056 DDR1Q08345 913 aa25.01■■□□□ 1.59
UBXN1-211ENST00000531056 LMOD3Q0VAK6 560 aa25.01■■□□□ 1.59
UBXN1-211ENST00000531056 BCL2L12Q9HB09 334 aa25.01■■□□□ 1.59
UBXN1-211ENST00000531056 RRP7AQ9Y3A4 280 aaKnown RBP25.01■■□□□ 1.59
UBXN1-211ENST00000531056 PARP3Q9Y6F1 533 aa25.01■■□□□ 1.59
UBXN1-211ENST00000531056 NRXN2Q9P2S2 1712 aa25■■□□□ 1.59
UBXN1-211ENST00000531056 A0A087WZG4 1122 aa24.99■■□□□ 1.59
UBXN1-211ENST00000531056 PXDNLA1KZ92 1463 aa24.99■■□□□ 1.59
UBXN1-211ENST00000531056 TM4SF1P30408 202 aa24.99■■□□□ 1.59
UBXN1-211ENST00000531056 AFDNP55196 1824 aaKnown RBP24.99■■□□□ 1.59
UBXN1-211ENST00000531056 GPR162Q16538 588 aa24.99■■□□□ 1.59
UBXN1-211ENST00000531056 CCDC184Q52MB2 194 aa24.99■■□□□ 1.59
UBXN1-211ENST00000531056 N4BP2Q86UW6 1770 aaPredicted RBP24.99■■□□□ 1.59
UBXN1-211ENST00000531056 CHD4Q14839 1912 aa24.98■■□□□ 1.59
UBXN1-211ENST00000531056 EIF4A1P60842 406 aaKnown RBP24.98■■□□□ 1.59
UBXN1-211ENST00000531056 UTRNP46939 3433 aa24.98■■□□□ 1.59
UBXN1-211ENST00000531056 POLRMTO00411 1230 aaKnown RBP24.97■■□□□ 1.59
UBXN1-211ENST00000531056 YBX3P16989 372 aaKnown RBP eCLIP24.97■■□□□ 1.59
UBXN1-211ENST00000531056 TRIM35Q9UPQ4 493 aa24.97■■□□□ 1.59
UBXN1-211ENST00000531056 NEUROD2Q15784 382 aa24.96■■□□□ 1.59
UBXN1-211ENST00000531056 PELP1Q8IZL8 1130 aaKnown RBP24.96■■□□□ 1.59
UBXN1-211ENST00000531056 GIGYF1O75420 1035 aaPredicted RBP24.95■■□□□ 1.58
UBXN1-211ENST00000531056 PIP4K2AP48426 406 aaPredicted RBP24.95■■□□□ 1.58
UBXN1-211ENST00000531056 NFIXQ14938 502 aa24.95■■□□□ 1.58
UBXN1-211ENST00000531056 BABAM1Q9NWV8 329 aa24.95■■□□□ 1.58
UBXN1-211ENST00000531056 ZNF330Q9Y3S2 320 aaPredicted RBP24.95■■□□□ 1.58
UBXN1-211ENST00000531056 BRCA1P38398 1863 aaKnown RBP24.95■■□□□ 1.58
UBXN1-211ENST00000531056 ANP32CO43423 234 aa24.94■■□□□ 1.58
UBXN1-211ENST00000531056 TSPYL4Q9UJ04 414 aa24.94■■□□□ 1.58
UBXN1-211ENST00000531056 GOLGB1Q14789 3259 aaKnown RBP24.93■■□□□ 1.58
UBXN1-211ENST00000531056 NBPF26B4DH59 902 aa24.93■■□□□ 1.58
UBXN1-211ENST00000531056 YY1P25490 414 aa24.93■■□□□ 1.58
UBXN1-211ENST00000531056 NBPF10Q6P3W6 841 aaKnown RBP24.93■■□□□ 1.58
UBXN1-211ENST00000531056 NBPF15Q8N660 670 aa24.93■■□□□ 1.58
UBXN1-211ENST00000531056 TBC1D2BQ9UPU7 963 aa24.93■■□□□ 1.58
UBXN1-211ENST00000531056 CAMTA2O94983 1202 aa24.92■■□□□ 1.58
UBXN1-211ENST00000531056 TGFB2P61812 414 aa24.92■■□□□ 1.58
UBXN1-211ENST00000531056 DZIP3Q86Y13 1208 aaKnown RBP24.9■■□□□ 1.58
UBXN1-211ENST00000531056 APAF1O14727 1248 aa24.89■■□□□ 1.58
UBXN1-211ENST00000531056 TBC1D9BQ66K14 1250 aa24.89■■□□□ 1.58
UBXN1-211ENST00000531056 NPM2Q86SE8 214 aaKnown RBP24.89■■□□□ 1.58
UBXN1-211ENST00000531056 CHL1O00533 1208 aa24.88■■□□□ 1.57
UBXN1-211ENST00000531056 GRIN3BO60391 1043 aa24.88■■□□□ 1.57
UBXN1-211ENST00000531056 A0A0G2JLW4 131 aa24.87■■□□□ 1.57
UBXN1-211ENST00000531056 SERPINB2P05120 415 aa24.87■■□□□ 1.57
UBXN1-211ENST00000531056 DPEP1P16444 411 aa24.87■■□□□ 1.57
UBXN1-211ENST00000531056 DLEC1Q9Y238 1755 aa24.86■■□□□ 1.57
UBXN1-211ENST00000531056 BICDL1Q6ZP65 573 aa24.86■■□□□ 1.57
UBXN1-211ENST00000531056 WWC3Q9ULE0 1092 aa24.86■■□□□ 1.57
UBXN1-211ENST00000531056 ANKRD31Q8N7Z5 1873 aa24.85■■□□□ 1.57
UBXN1-211ENST00000531056 CARMIL3Q8ND23 1372 aa24.85■■□□□ 1.57
UBXN1-211ENST00000531056 KCNA3P22001 575 aa24.85■■□□□ 1.57
UBXN1-211ENST00000531056 MRS2Q9HD23 443 aa24.85■■□□□ 1.57
UBXN1-211ENST00000531056 ARFGEF1Q9Y6D6 1849 aa24.84■■□□□ 1.57
UBXN1-211ENST00000531056 ERBB4Q15303 1308 aa24.84■■□□□ 1.57
UBXN1-211ENST00000531056 RGL2O15211 777 aa24.83■■□□□ 1.57
UBXN1-211ENST00000531056 CLEC4GQ6UXB4 293 aa24.83■■□□□ 1.57
UBXN1-211ENST00000531056 LAS1LQ9Y4W2 734 aaKnown RBP24.82■■□□□ 1.56
UBXN1-211ENST00000531056 CFAP44Q96MT7 982 aa24.81■■□□□ 1.56
UBXN1-211ENST00000531056 NUP98P52948 1817 aa24.8■■□□□ 1.56
UBXN1-211ENST00000531056 ZNF853P0CG23 659 aa24.8■■□□□ 1.56
UBXN1-211ENST00000531056 CHRNA5P30532 468 aa24.8■■□□□ 1.56
UBXN1-211ENST00000531056 KRT24Q2M2I5 525 aa24.8■■□□□ 1.56
UBXN1-211ENST00000531056 ZNF652Q9Y2D9 606 aa24.8■■□□□ 1.56
UBXN1-211ENST00000531056 COL11A2P13942 1736 aaPredicted RBP24.79■■□□□ 1.56
UBXN1-211ENST00000531056 LRP10Q7Z4F1 713 aa24.79■■□□□ 1.56
UBXN1-211ENST00000531056 SETDB2Q96T68 719 aa24.79■■□□□ 1.56
UBXN1-211ENST00000531056 MYL6BP14649 208 aa24.78■■□□□ 1.56
UBXN1-211ENST00000531056 PDIA6Q15084 440 aa24.78■■□□□ 1.56
UBXN1-211ENST00000531056 PRR5LQ6MZQ0 368 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms