RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 RHBDD1Q8TEB9 315 aa10.64□□□□□ -0.71
VPS26B-205ENST00000530402 ZFP42Q96MM3 310 aa10.64□□□□□ -0.71
VPS26B-205ENST00000530402 GZF1Q9H116 711 aaPredicted RBP10.63□□□□□ -0.71
VPS26B-205ENST00000530402 PARP3Q9Y6F1 533 aa10.63□□□□□ -0.71
VPS26B-205ENST00000530402 FIGNL2A6NMB9 653 aa10.62□□□□□ -0.71
VPS26B-205ENST00000530402 ABL1P00519 1130 aa10.62□□□□□ -0.71
VPS26B-205ENST00000530402 NOS2P35228 1153 aa10.62□□□□□ -0.71
VPS26B-205ENST00000530402 NAA30Q147X3 362 aaPredicted RBP10.62□□□□□ -0.71
VPS26B-205ENST00000530402 LYSMD3Q7Z3D4 306 aa10.62□□□□□ -0.71
VPS26B-205ENST00000530402 RNF217Q8TC41 542 aa10.62□□□□□ -0.71
VPS26B-205ENST00000530402 C2orf49Q9BVC5 232 aaPredicted RBP10.62□□□□□ -0.71
VPS26B-205ENST00000530402 AAASQ9NRG9 546 aa10.62□□□□□ -0.71
VPS26B-205ENST00000530402 GNEQ9Y223 722 aaKnown RBP10.62□□□□□ -0.71
VPS26B-205ENST00000530402 PHKA2P46019 1235 aa10.61□□□□□ -0.71
VPS26B-205ENST00000530402 PLA2G4AP47712 749 aa10.61□□□□□ -0.71
VPS26B-205ENST00000530402 TEAD4Q15561 434 aa10.61□□□□□ -0.71
VPS26B-205ENST00000530402 TXNDC2Q86VQ3 553 aa10.61□□□□□ -0.71
VPS26B-205ENST00000530402 L3MBTL2Q969R5 705 aa10.61□□□□□ -0.71
VPS26B-205ENST00000530402 NGLY1Q96IV0 654 aa10.61□□□□□ -0.71
VPS26B-205ENST00000530402 PODXL2Q9NZ53 605 aa10.61□□□□□ -0.71
VPS26B-205ENST00000530402 SERPINB4P48594 390 aa10.6□□□□□ -0.71
VPS26B-205ENST00000530402 POU4F2Q12837 409 aa10.6□□□□□ -0.71
VPS26B-205ENST00000530402 CAPN12Q6ZSI9 719 aa10.6□□□□□ -0.71
VPS26B-205ENST00000530402 STAG2Q8N3U4 1231 aa10.6□□□□□ -0.71
VPS26B-205ENST00000530402 AIDAQ96BJ3 306 aa10.6□□□□□ -0.71
VPS26B-205ENST00000530402 ATP13A2Q9NQ11 1180 aa10.6□□□□□ -0.71
VPS26B-205ENST00000530402 SEPT3Q9UH03 358 aa10.6□□□□□ -0.71
VPS26B-205ENST00000530402 HCN4Q9Y3Q4 1203 aa10.6□□□□□ -0.71
VPS26B-205ENST00000530402 C4orf17Q53FE4 359 aa10.59□□□□□ -0.71
VPS26B-205ENST00000530402 ZDHHC1Q8WTX9 485 aa10.59□□□□□ -0.71
VPS26B-205ENST00000530402 COL26A1Q96A83 441 aa10.59□□□□□ -0.71
VPS26B-205ENST00000530402 SOS2Q07890 1332 aaPredicted RBP10.58□□□□□ -0.71
VPS26B-205ENST00000530402 SH3PXD2AQ5TCZ1 1133 aa10.58□□□□□ -0.72
VPS26B-205ENST00000530402 GTF3C2Q8WUA4 911 aaPredicted RBP10.58□□□□□ -0.72
VPS26B-205ENST00000530402 SPATA31C2B4DYI2 1134 aa10.57□□□□□ -0.72
VPS26B-205ENST00000530402 EML1O00423 815 aa10.57□□□□□ -0.72
VPS26B-205ENST00000530402 MAN1A2O60476 641 aa10.57□□□□□ -0.72
VPS26B-205ENST00000530402 RHOQP17081 205 aa10.57□□□□□ -0.72
VPS26B-205ENST00000530402 NBPF1Q3BBV0 1214 aa10.57□□□□□ -0.72
VPS26B-205ENST00000530402 NBPF10Q6P3W6 841 aaKnown RBP10.57□□□□□ -0.72
VPS26B-205ENST00000530402 DACH1Q9UI36 760 aa10.57□□□□□ -0.72
VPS26B-205ENST00000530402 ZNF211Q13398 564 aaPredicted RBP10.56□□□□□ -0.72
VPS26B-205ENST00000530402 C16orf46Q6P387 395 aa10.56□□□□□ -0.72
VPS26B-205ENST00000530402 Q6ZNB5 142 aa10.56□□□□□ -0.72
VPS26B-205ENST00000530402 ANO2Q9NQ90 1003 aa10.56□□□□□ -0.72
VPS26B-205ENST00000530402 ALDH16A1Q8IZ83 802 aa10.55□□□□□ -0.72
VPS26B-205ENST00000530402 ZNF295-AS1Q8N0V1 137 aa10.55□□□□□ -0.72
VPS26B-205ENST00000530402 PHACTR1Q9C0D0 580 aa10.55□□□□□ -0.72
VPS26B-205ENST00000530402 TIMMDC1Q9NPL8 285 aa10.55□□□□□ -0.72
VPS26B-205ENST00000530402 TATP17735 454 aaPredicted RBP10.54□□□□□ -0.72
VPS26B-205ENST00000530402 HIRAP54198 1017 aaPredicted RBP10.54□□□□□ -0.72
VPS26B-205ENST00000530402 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.54□□□□□ -0.72
VPS26B-205ENST00000530402 DNMT3LQ9UJW3 386 aa10.54□□□□□ -0.72
VPS26B-205ENST00000530402 H3BRB1 525 aa10.53□□□□□ -0.72
VPS26B-205ENST00000530402 TXLNAP40222 546 aa10.53□□□□□ -0.72
VPS26B-205ENST00000530402 WDR44Q5JSH3 913 aa10.53□□□□□ -0.72
VPS26B-205ENST00000530402 GLYCTKQ8IVS8 523 aa10.53□□□□□ -0.72
VPS26B-205ENST00000530402 SAP130Q9H0E3 1048 aa10.53□□□□□ -0.72
VPS26B-205ENST00000530402 TUT1Q9H6E5 874 aaKnown RBP10.53□□□□□ -0.72
VPS26B-205ENST00000530402 SENP2Q9HC62 589 aa10.53□□□□□ -0.72
VPS26B-205ENST00000530402 BIN2Q9UBW5 565 aaPredicted RBP10.53□□□□□ -0.72
VPS26B-205ENST00000530402 DNMT3AQ9Y6K1 912 aaPredicted RBP10.53□□□□□ -0.72
VPS26B-205ENST00000530402 MTMR3Q13615 1198 aa10.52□□□□□ -0.73
VPS26B-205ENST00000530402 TMCO4Q5TGY1 634 aa10.52□□□□□ -0.73
VPS26B-205ENST00000530402 POTEAQ6S8J7 498 aa10.52□□□□□ -0.73
VPS26B-205ENST00000530402 BICDL1Q6ZP65 573 aa10.52□□□□□ -0.73
VPS26B-205ENST00000530402 RHPN1Q8TCX5 695 aa10.52□□□□□ -0.73
VPS26B-205ENST00000530402 QTRT2Q9H974 415 aaKnown RBP10.52□□□□□ -0.73
VPS26B-205ENST00000530402 EGFL7Q9UHF1 273 aa10.52□□□□□ -0.73
VPS26B-205ENST00000530402 SOWAHDA6NJG2 315 aa10.51□□□□□ -0.73
VPS26B-205ENST00000530402 FKBP4Q02790 459 aaKnown RBP eCLIP10.51□□□□□ -0.73
VPS26B-205ENST00000530402 COX20Q5RI15 118 aa10.51□□□□□ -0.73
VPS26B-205ENST00000530402 HELQQ8TDG4 1101 aa10.51□□□□□ -0.73
VPS26B-205ENST00000530402 KIFC2Q96AC6 838 aa10.51□□□□□ -0.73
VPS26B-205ENST00000530402 A0A1B0GTH6 734 aa10.5□□□□□ -0.73
VPS26B-205ENST00000530402 SOBPA7XYQ1 873 aa10.5□□□□□ -0.73
VPS26B-205ENST00000530402 SF3B2Q13435 895 aaKnown RBP10.5□□□□□ -0.73
VPS26B-205ENST00000530402 RTN1Q16799 776 aa10.5□□□□□ -0.73
VPS26B-205ENST00000530402 ARSJQ5FYB0 599 aaPredicted RBP10.5□□□□□ -0.73
VPS26B-205ENST00000530402 C1orf53Q5VUE5 145 aa10.5□□□□□ -0.73
VPS26B-205ENST00000530402 SND1Q7KZF4 910 aaKnown RBP eCLIP10.5□□□□□ -0.73
VPS26B-205ENST00000530402 NEUROD4Q9HD90 331 aa10.5□□□□□ -0.73
VPS26B-205ENST00000530402 ZDHHC3Q9NYG2 299 aa10.5□□□□□ -0.73
VPS26B-205ENST00000530402 ICMTO60725 284 aa10.49□□□□□ -0.73
VPS26B-205ENST00000530402 DGKZQ13574 1117 aa10.49□□□□□ -0.73
VPS26B-205ENST00000530402 GAS2L1Q99501 681 aaPredicted RBP10.49□□□□□ -0.73
VPS26B-205ENST00000530402 MYO19Q96H55 970 aa10.48□□□□□ -0.73
VPS26B-205ENST00000530402 GPAMQ9HCL2 828 aa10.48□□□□□ -0.73
VPS26B-205ENST00000530402 GMPR2Q9P2T1 348 aaKnown RBP10.48□□□□□ -0.73
VPS26B-205ENST00000530402 LRFN2Q9ULH4 789 aa10.48□□□□□ -0.73
VPS26B-205ENST00000530402 MSX1P28360 303 aa10.47□□□□□ -0.73
VPS26B-205ENST00000530402 AAMPQ13685 434 aa10.47□□□□□ -0.73
VPS26B-205ENST00000530402 C11orf91Q3C1V1 193 aa10.47□□□□□ -0.73
VPS26B-205ENST00000530402 PGBD3Q8N328 593 aa10.47□□□□□ -0.73
VPS26B-205ENST00000530402 KLK14Q9P0G3 267 aa10.47□□□□□ -0.73
VPS26B-205ENST00000530402 STIM2Q9P246 746 aa10.47□□□□□ -0.73
VPS26B-205ENST00000530402 CCDC9Q9Y3X0 531 aaKnown RBP10.47□□□□□ -0.73
VPS26B-205ENST00000530402 FAM13AO94988 1023 aa10.46□□□□□ -0.73
VPS26B-205ENST00000530402 BRD2P25440 801 aaKnown RBP10.46□□□□□ -0.73
VPS26B-205ENST00000530402 TRIM47Q96LD4 638 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms