RNA–Protein interactions for RNA: ENST00000530396.1

NCAPD3-208, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 1,521 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-208ENST00000530396 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 COG6Q9Y2V7 657 aa12.47□□□□□ -0.41
NCAPD3-208ENST00000530396 ITGB4P16144 1822 aa12.46□□□□□ -0.41
NCAPD3-208ENST00000530396 C4BP0C0L5 1744 aa12.46□□□□□ -0.42
NCAPD3-208ENST00000530396 RWDD1Q9H446 243 aaPredicted RBP12.46□□□□□ -0.42
NCAPD3-208ENST00000530396 CD2APQ9Y5K6 639 aa12.46□□□□□ -0.42
NCAPD3-208ENST00000530396 BRPF1P55201 1214 aaPredicted RBP12.45□□□□□ -0.42
NCAPD3-208ENST00000530396 MVPQ14764 893 aaKnown RBP12.45□□□□□ -0.42
NCAPD3-208ENST00000530396 EMILIN1Q9Y6C2 1016 aa12.45□□□□□ -0.42
NCAPD3-208ENST00000530396 DLG5Q8TDM6 1919 aa12.45□□□□□ -0.42
NCAPD3-208ENST00000530396 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
NCAPD3-208ENST00000530396 NKX1-1Q15270 411 aaPredicted RBP12.44□□□□□ -0.42
NCAPD3-208ENST00000530396 AK7Q96M32 723 aa12.44□□□□□ -0.42
NCAPD3-208ENST00000530396 U2SURPO15042 1029 aaKnown RBP12.43□□□□□ -0.42
NCAPD3-208ENST00000530396 ALDH1L2Q3SY69 923 aa12.43□□□□□ -0.42
NCAPD3-208ENST00000530396 SKAP1Q86WV1 359 aa12.43□□□□□ -0.42
NCAPD3-208ENST00000530396 DZIP1LQ8IYY4 767 aaKnown RBP12.43□□□□□ -0.42
NCAPD3-208ENST00000530396 FRAT1Q92837 279 aaPredicted RBP12.43□□□□□ -0.42
NCAPD3-208ENST00000530396 SPG7Q9UQ90 795 aa12.43□□□□□ -0.42
NCAPD3-208ENST00000530396 UBR3Q6ZT12 1888 aa12.43□□□□□ -0.42
NCAPD3-208ENST00000530396 RLBP1P12271 317 aa12.42□□□□□ -0.42
NCAPD3-208ENST00000530396 DEKP35659 375 aaKnown RBP12.42□□□□□ -0.42
NCAPD3-208ENST00000530396 RGS3P49796 1198 aa12.42□□□□□ -0.42
NCAPD3-208ENST00000530396 PIGBQ92521 554 aa12.42□□□□□ -0.42
NCAPD3-208ENST00000530396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.429e-7■□□□□ 10
NCAPD3-208ENST00000530396 KIF16BQ96L93 1317 aa12.42□□□□□ -0.42
NCAPD3-208ENST00000530396 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
NCAPD3-208ENST00000530396 NEFMP07197 916 aa12.42□□□□□ -0.42
NCAPD3-208ENST00000530396 HDAC1Q13547 482 aaPredicted RBP12.42□□□□□ -0.42
NCAPD3-208ENST00000530396 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
NCAPD3-208ENST00000530396 PCDHB15Q9Y5E8 787 aa12.42□□□□□ -0.42
NCAPD3-208ENST00000530396 SSFA2P28290 1259 aa12.41□□□□□ -0.42
NCAPD3-208ENST00000530396 RIPK4P57078 832 aa12.41□□□□□ -0.42
NCAPD3-208ENST00000530396 EXOSC9Q06265 439 aaKnown RBP12.41□□□□□ -0.42
NCAPD3-208ENST00000530396 POLKQ9UBT6 870 aa12.41□□□□□ -0.42
NCAPD3-208ENST00000530396 DDX19BQ9UMR2 479 aa12.41□□□□□ -0.42
NCAPD3-208ENST00000530396 PLEKHG2Q9H7P9 1386 aa12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 ATP10DQ9P241 1426 aa12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 LOC102724428A0A0B4J2F2 783 aa12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 SIK1P57059 783 aa12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 NBR1Q14596 966 aa12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 ATF7IPQ6VMQ6 1270 aa12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 AMIGO3Q86WK7 504 aa12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 EYA1Q99502 592 aa12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 CHMP4BQ9H444 224 aaKnown RBP12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 TMOD3Q9NYL9 352 aa12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 DAXXQ9UER7 740 aaPredicted RBP12.4□□□□□ -0.42
NCAPD3-208ENST00000530396 PHF14O94880 888 aa12.39□□□□□ -0.43
NCAPD3-208ENST00000530396 NFE2L2Q16236 605 aa12.39□□□□□ -0.43
NCAPD3-208ENST00000530396 FTSJ3Q8IY81 847 aaKnown RBP12.39□□□□□ -0.43
NCAPD3-208ENST00000530396 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
NCAPD3-208ENST00000530396 ADCY9O60503 1353 aa12.39□□□□□ -0.43
NCAPD3-208ENST00000530396 PHKG2P15735 406 aa12.38□□□□□ -0.43
NCAPD3-208ENST00000530396 LMOD3Q0VAK6 560 aa12.38□□□□□ -0.43
NCAPD3-208ENST00000530396 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
NCAPD3-208ENST00000530396 LINC00116Q8NCU8 138 aa12.38□□□□□ -0.43
NCAPD3-208ENST00000530396 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
NCAPD3-208ENST00000530396 ARHGAP45Q92619 1136 aa12.38□□□□□ -0.43
NCAPD3-208ENST00000530396 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
NCAPD3-208ENST00000530396 TSR2Q969E8 191 aaKnown RBP12.37□□□□□ -0.43
NCAPD3-208ENST00000530396 IGSF1Q8N6C5 1336 aa12.37□□□□□ -0.43
NCAPD3-208ENST00000530396 TRIM27P14373 513 aa12.37□□□□□ -0.43
NCAPD3-208ENST00000530396 IL13P35225 146 aa12.37□□□□□ -0.43
NCAPD3-208ENST00000530396 ITPK1Q13572 414 aa12.37□□□□□ -0.43
NCAPD3-208ENST00000530396 CEP350Q5VT06 3117 aa12.37□□□□□ -0.43
NCAPD3-208ENST00000530396 SMIM5Q71RC9 77 aa12.37□□□□□ -0.43
NCAPD3-208ENST00000530396 GPBP1L1Q9HC44 474 aaPredicted RBP12.37□□□□□ -0.43
NCAPD3-208ENST00000530396 ASAP1Q9ULH1 1129 aa12.37□□□□□ -0.43
NCAPD3-208ENST00000530396 GNPATO15228 680 aa12.36□□□□□ -0.43
NCAPD3-208ENST00000530396 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
NCAPD3-208ENST00000530396 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
NCAPD3-208ENST00000530396 GNAI1P63096 354 aa12.36□□□□□ -0.43
NCAPD3-208ENST00000530396 SMC5Q8IY18 1101 aa12.36□□□□□ -0.43
NCAPD3-208ENST00000530396 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
NCAPD3-208ENST00000530396 ZNF853P0CG23 659 aa12.35□□□□□ -0.43
NCAPD3-208ENST00000530396 EIF4A2Q14240 407 aaKnown RBP12.35□□□□□ -0.43
NCAPD3-208ENST00000530396 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
NCAPD3-208ENST00000530396 ATG3Q9NT62 314 aa12.35□□□□□ -0.43
NCAPD3-208ENST00000530396 TNNQ9UQP3 1299 aa12.35□□□□□ -0.43
NCAPD3-208ENST00000530396 ZNF831Q5JPB2 1677 aa12.35□□□□□ -0.43
NCAPD3-208ENST00000530396 KDRP35968 1356 aa12.34□□□□□ -0.43
NCAPD3-208ENST00000530396 BECN1Q14457 450 aa12.34□□□□□ -0.43
NCAPD3-208ENST00000530396 UPF2Q9HAU5 1272 aaKnown RBP12.34□□□□□ -0.43
NCAPD3-208ENST00000530396 ZBTB40Q9NUA8 1239 aa12.34□□□□□ -0.43
NCAPD3-208ENST00000530396 CICQ96RK0 1608 aaPredicted RBP12.34□□□□□ -0.43
NCAPD3-208ENST00000530396 ERVV-2B6SEH9 535 aa12.33□□□□□ -0.44
NCAPD3-208ENST00000530396 HSP90AB1P08238 724 aaKnown RBP12.33□□□□□ -0.44
NCAPD3-208ENST00000530396 NOB1Q9ULX3 412 aaKnown RBP12.33□□□□□ -0.44
NCAPD3-208ENST00000530396 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
NCAPD3-208ENST00000530396 CACNA1FO60840 1977 aa12.33□□□□□ -0.44
NCAPD3-208ENST00000530396 MMP10P09238 476 aa12.32□□□□□ -0.44
NCAPD3-208ENST00000530396 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
NCAPD3-208ENST00000530396 RTCBQ9Y3I0 505 aaKnown RBP12.32□□□□□ -0.44
NCAPD3-208ENST00000530396 LAS1LQ9Y4W2 734 aaKnown RBP12.32□□□□□ -0.44
NCAPD3-208ENST00000530396 TRAPPC3LQ5T215 181 aa12.32□□□□□ -0.44
NCAPD3-208ENST00000530396 RC3H1Q5TC82 1133 aaKnown RBP12.32□□□□□ -0.44
NCAPD3-208ENST00000530396 TBC1D32Q96NH3 1257 aa12.32□□□□□ -0.44
NCAPD3-208ENST00000530396 BCL11AQ9H165 835 aa12.32□□□□□ -0.44
NCAPD3-208ENST00000530396 WWC3Q9ULE0 1092 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms