RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 SOS1Q07889 1333 aaPredicted RBP22.5■■□□□ 1.19
CCS-205ENST00000530384 ANP32CO43423 234 aa22.49■■□□□ 1.19
CCS-205ENST00000530384 TMPOP42166 694 aaKnown RBP22.49■■□□□ 1.19
CCS-205ENST00000530384 CCDC146Q8IYE0 955 aa22.49■■□□□ 1.19
CCS-205ENST00000530384 ZBTB1Q9Y2K1 713 aa22.49■■□□□ 1.19
CCS-205ENST00000530384 GYS1P13807 737 aa22.48■■□□□ 1.19
CCS-205ENST00000530384 USP42Q9H9J4 1324 aaKnown RBP22.47■■□□□ 1.19
CCS-205ENST00000530384 COL15A1P39059 1388 aa22.47■■□□□ 1.19
CCS-205ENST00000530384 KDM3BQ7LBC6 1761 aa22.46■■□□□ 1.19
CCS-205ENST00000530384 SNRPA1P09661 255 aaKnown RBP22.46■■□□□ 1.19
CCS-205ENST00000530384 CANXP27824 592 aaKnown RBP22.46■■□□□ 1.19
CCS-205ENST00000530384 THUMPD2Q9BTF0 503 aaKnown RBP22.46■■□□□ 1.19
CCS-205ENST00000530384 CD2APQ9Y5K6 639 aa22.46■■□□□ 1.19
CCS-205ENST00000530384 ZPR1O75312 459 aa22.45■■□□□ 1.18
CCS-205ENST00000530384 MMP10P09238 476 aa22.45■■□□□ 1.18
CCS-205ENST00000530384 MIS18AQ9NYP9 233 aa22.44■■□□□ 1.18
CCS-205ENST00000530384 SRP68Q9UHB9 627 aaKnown RBP22.44■■□□□ 1.18
CCS-205ENST00000530384 A0A087WZG4 1122 aa22.43■■□□□ 1.18
CCS-205ENST00000530384 NARFQ9UHQ1 456 aa22.43■■□□□ 1.18
CCS-205ENST00000530384 RRP7AQ9Y3A4 280 aaKnown RBP22.43■■□□□ 1.18
CCS-205ENST00000530384 IL6STP40189 918 aaPredicted RBP22.42■■□□□ 1.18
CCS-205ENST00000530384 EIF5P55010 431 aaKnown RBP22.42■■□□□ 1.18
CCS-205ENST00000530384 NEUROD2Q15784 382 aa22.42■■□□□ 1.18
CCS-205ENST00000530384 USP16Q9Y5T5 823 aa22.42■■□□□ 1.18
CCS-205ENST00000530384 NPM2Q86SE8 214 aaKnown RBP22.41■■□□□ 1.18
CCS-205ENST00000530384 NLGN2Q8NFZ4 835 aa22.41■■□□□ 1.18
CCS-205ENST00000530384 BABAM1Q9NWV8 329 aa22.41■■□□□ 1.18
CCS-205ENST00000530384 PARP3Q9Y6F1 533 aa22.41■■□□□ 1.18
CCS-205ENST00000530384 A1BGP04217 495 aa22.4■■□□□ 1.18
CCS-205ENST00000530384 FKBP8Q14318 412 aa22.4■■□□□ 1.18
CCS-205ENST00000530384 USPL1Q5W0Q7 1092 aa22.4■■□□□ 1.18
CCS-205ENST00000530384 PRAMEF22A3QJZ6 481 aa22.39■■□□□ 1.17
CCS-205ENST00000530384 EIF4A1P60842 406 aaKnown RBP22.39■■□□□ 1.17
CCS-205ENST00000530384 CCDC184Q52MB2 194 aa22.39■■□□□ 1.17
CCS-205ENST00000530384 LAMB4A4D0S4 1761 aa22.39■■□□□ 1.17
CCS-205ENST00000530384 TSPYL4Q9UJ04 414 aa22.38■■□□□ 1.17
CCS-205ENST00000530384 ZNF330Q9Y3S2 320 aaPredicted RBP22.38■■□□□ 1.17
CCS-205ENST00000530384 KIF13BQ9NQT8 1826 aa22.37■■□□□ 1.17
CCS-205ENST00000530384 MRS2Q9HD23 443 aa22.37■■□□□ 1.17
CCS-205ENST00000530384 TRIM35Q9UPQ4 493 aa22.37■■□□□ 1.17
CCS-205ENST00000530384 GIGYF1O75420 1035 aaPredicted RBP22.36■■□□□ 1.17
CCS-205ENST00000530384 GPR162Q16538 588 aa22.36■■□□□ 1.17
CCS-205ENST00000530384 APAF1O14727 1248 aa22.35■■□□□ 1.17
CCS-205ENST00000530384 TM4SF1P30408 202 aa22.35■■□□□ 1.17
CCS-205ENST00000530384 C10orf71Q711Q0 1435 aa22.34■■□□□ 1.17
CCS-205ENST00000530384 SCN7AQ01118 1682 aa22.34■■□□□ 1.17
CCS-205ENST00000530384 BCL2L12Q9HB09 334 aa22.34■■□□□ 1.17
CCS-205ENST00000530384 DDR1Q08345 913 aa22.33■■□□□ 1.17
CCS-205ENST00000530384 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.17
CCS-205ENST00000530384 TBC1D2BQ9UPU7 963 aa22.33■■□□□ 1.17
CCS-205ENST00000530384 POLRMTO00411 1230 aaKnown RBP22.32■■□□□ 1.16
CCS-205ENST00000530384 NFIXQ14938 502 aa22.32■■□□□ 1.16
CCS-205ENST00000530384 DZIP3Q86Y13 1208 aaKnown RBP22.32■■□□□ 1.16
CCS-205ENST00000530384 CHL1O00533 1208 aa22.31■■□□□ 1.16
CCS-205ENST00000530384 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
CCS-205ENST00000530384 TGFB2P61812 414 aa22.31■■□□□ 1.16
CCS-205ENST00000530384 BCORQ6W2J9 1755 aa22.3■■□□□ 1.16
CCS-205ENST00000530384 NBPF26B4DH59 902 aa22.3■■□□□ 1.16
CCS-205ENST00000530384 NBPF10Q6P3W6 841 aaKnown RBP22.3■■□□□ 1.16
CCS-205ENST00000530384 NBPF15Q8N660 670 aa22.3■■□□□ 1.16
CCS-205ENST00000530384 CHD4Q14839 1912 aa22.29■■□□□ 1.16
CCS-205ENST00000530384 AFDNP55196 1824 aaKnown RBP22.29■■□□□ 1.16
CCS-205ENST00000530384 CAMTA2O94983 1202 aa22.29■■□□□ 1.16
CCS-205ENST00000530384 CALD1Q05682 793 aaKnown RBP22.29■■□□□ 1.16
CCS-205ENST00000530384 LAS1LQ9Y4W2 734 aaKnown RBP22.29■■□□□ 1.16
CCS-205ENST00000530384 NRXN2Q9P2S2 1712 aa22.28■■□□□ 1.16
CCS-205ENST00000530384 GRIN3BO60391 1043 aa22.28■■□□□ 1.16
CCS-205ENST00000530384 CFAP44Q96MT7 982 aa22.28■■□□□ 1.16
CCS-205ENST00000530384 KIAA1551Q9HCM1 1747 aa22.28■■□□□ 1.16
CCS-205ENST00000530384 ERBB4Q15303 1308 aa22.28■■□□□ 1.16
CCS-205ENST00000530384 PXDNLA1KZ92 1463 aa22.28■■□□□ 1.16
CCS-205ENST00000530384 SERPINB2P05120 415 aa22.27■■□□□ 1.16
CCS-205ENST00000530384 YBX3P16989 372 aaKnown RBP eCLIP22.27■■□□□ 1.16
CCS-205ENST00000530384 CLEC4GQ6UXB4 293 aa22.27■■□□□ 1.16
CCS-205ENST00000530384 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.16
CCS-205ENST00000530384 RGL2O15211 777 aa22.26■■□□□ 1.15
CCS-205ENST00000530384 TBC1D9BQ66K14 1250 aa22.26■■□□□ 1.15
CCS-205ENST00000530384 BICDL1Q6ZP65 573 aa22.26■■□□□ 1.15
CCS-205ENST00000530384 ZNF652Q9Y2D9 606 aa22.26■■□□□ 1.15
CCS-205ENST00000530384 YY1P25490 414 aa22.25■■□□□ 1.15
CCS-205ENST00000530384 CARMIL3Q8ND23 1372 aa22.25■■□□□ 1.15
CCS-205ENST00000530384 IFT57Q9NWB7 429 aa22.24■■□□□ 1.15
CCS-205ENST00000530384 A0A0G2JLW4 131 aa22.23■■□□□ 1.15
CCS-205ENST00000530384 DPEP1P16444 411 aa22.23■■□□□ 1.15
CCS-205ENST00000530384 EIF2S2P20042 333 aaKnown RBP22.23■■□□□ 1.15
CCS-205ENST00000530384 GNAI1P63096 354 aa22.23■■□□□ 1.15
CCS-205ENST00000530384 SETDB2Q96T68 719 aa22.23■■□□□ 1.15
CCS-205ENST00000530384 ZNF853P0CG23 659 aa22.22■■□□□ 1.15
CCS-205ENST00000530384 MYL6BP14649 208 aa22.22■■□□□ 1.15
CCS-205ENST00000530384 CCDC27Q2M243 656 aa22.22■■□□□ 1.15
CCS-205ENST00000530384 NCBP3Q53F19 620 aaKnown RBP22.22■■□□□ 1.15
CCS-205ENST00000530384 MBIPQ9NS73 344 aa22.22■■□□□ 1.15
CCS-205ENST00000530384 BRCA1P38398 1863 aaKnown RBP22.22■■□□□ 1.15
CCS-205ENST00000530384 HOXB7P09629 217 aa22.21■■□□□ 1.15
CCS-205ENST00000530384 NGEFQ8N5V2 710 aa22.21■■□□□ 1.15
CCS-205ENST00000530384 ERVV-1B6SEH8 477 aa22.2■■□□□ 1.14
CCS-205ENST00000530384 KIF6Q6ZMV9 814 aa22.2■■□□□ 1.14
CCS-205ENST00000530384 WWC3Q9ULE0 1092 aa22.2■■□□□ 1.14
CCS-205ENST00000530384 UTRNP46939 3433 aa22.19■■□□□ 1.14
CCS-205ENST00000530384 KRT24Q2M2I5 525 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms