RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 MTMR7Q9Y216 660 aa18.01■□□□□ 0.47
PCDHA4-203ENST00000530339 URI1O94763 535 aaPredicted RBP18.01■□□□□ 0.47
PCDHA4-203ENST00000530339 MYL6BP14649 208 aa18.01■□□□□ 0.47
PCDHA4-203ENST00000530339 PUS7Q96PZ0 661 aaKnown RBP18.01■□□□□ 0.47
PCDHA4-203ENST00000530339 DUOX2Q9NRD8 1548 aa18.01■□□□□ 0.47
PCDHA4-203ENST00000530339 FKBP4Q02790 459 aaKnown RBP eCLIP18.01■□□□□ 0.47
PCDHA4-203ENST00000530339 HYPKQ9NX55 129 aa18.01■□□□□ 0.47
PCDHA4-203ENST00000530339 GSDMDP57764 484 aa18■□□□□ 0.47
PCDHA4-203ENST00000530339 CAVIN2O95810 425 aa18■□□□□ 0.47
PCDHA4-203ENST00000530339 PHAXQ9H814 394 aaKnown RBP18■□□□□ 0.47
PCDHA4-203ENST00000530339 BMP2KQ9NSY1 1161 aaPredicted RBP18■□□□□ 0.47
PCDHA4-203ENST00000530339 CCDC196A0A1B0GTZ2 297 aa18■□□□□ 0.47
PCDHA4-203ENST00000530339 ZNF287Q9HBT7 754 aa18■□□□□ 0.47
PCDHA4-203ENST00000530339 GPATCH8Q9UKJ3 1502 aaKnown RBP18■□□□□ 0.47
PCDHA4-203ENST00000530339 ASXL1Q8IXJ9 1541 aa18■□□□□ 0.47
PCDHA4-203ENST00000530339 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
PCDHA4-203ENST00000530339 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
PCDHA4-203ENST00000530339 IGHMBP2P38935 993 aaKnown RBP17.99■□□□□ 0.47
PCDHA4-203ENST00000530339 PIP4K2BP78356 416 aa17.99■□□□□ 0.47
PCDHA4-203ENST00000530339 RAPGEF6Q8TEU7 1601 aa17.99■□□□□ 0.47
PCDHA4-203ENST00000530339 TDO2P48775 406 aa17.99■□□□□ 0.47
PCDHA4-203ENST00000530339 ADGRF5Q8IZF2 1346 aa17.99■□□□□ 0.47
PCDHA4-203ENST00000530339 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
PCDHA4-203ENST00000530339 SLC26A8Q96RN1 970 aa17.99■□□□□ 0.47
PCDHA4-203ENST00000530339 STK11IPQ8N1F8 1099 aa17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 DENND4BO75064 1496 aaPredicted RBP17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 NOS1P29475 1434 aa17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 NUP133Q8WUM0 1156 aa17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 PARD3Q8TEW0 1356 aa17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 TOP1P11387 765 aaKnown RBP17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 CCDC148Q8NFR7 591 aa17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 DBF4Q9UBU7 674 aaPredicted RBP17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 ZKSCAN5Q9Y2L8 839 aa17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 DNAAF4Q8WXU2 420 aa17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 CRACR2AQ9BSW2 395 aa17.98■□□□□ 0.47
PCDHA4-203ENST00000530339 FAM177BA6PVY3 158 aa17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 HCLS1P14317 486 aaPredicted RBP17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 ZNF165P49910 485 aa17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 FAM193AP78312 1265 aa17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 HS1BP3Q53T59 392 aa17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 FANCAO15360 1455 aa17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 F6X3S4 739 aa17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 WDHD1O75717 1129 aaPredicted RBP17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 TMX3Q96JJ7 454 aa17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 PAXBP1Q9Y5B6 917 aa17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 LRRFIP2Q9Y608 721 aaKnown RBP17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 GJB2P29033 226 aa17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 AIDAQ96BJ3 306 aa17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 TRMT1Q9NXH9 659 aaKnown RBP17.97■□□□□ 0.47
PCDHA4-203ENST00000530339 KIF5CO60282 957 aa17.96■□□□□ 0.47
PCDHA4-203ENST00000530339 TCOF1Q13428 1488 aaKnown RBP17.96■□□□□ 0.47
PCDHA4-203ENST00000530339 GOLGA6L7A0A1B0GV03 622 aa17.96■□□□□ 0.47
PCDHA4-203ENST00000530339 ZFYVE27Q5T4F4 411 aa17.96■□□□□ 0.47
PCDHA4-203ENST00000530339 DDX54Q8TDD1 881 aaKnown RBP17.96■□□□□ 0.47
PCDHA4-203ENST00000530339 EVI5LQ96CN4 794 aa17.96■□□□□ 0.47
PCDHA4-203ENST00000530339 CASQ1P31415 396 aa17.96■□□□□ 0.47
PCDHA4-203ENST00000530339 BOLA2Q9H3K6 86 aa17.96■□□□□ 0.47
PCDHA4-203ENST00000530339 ZNF652Q9Y2D9 606 aa17.95■□□□□ 0.46
PCDHA4-203ENST00000530339 NOLC1Q14978 699 aaKnown RBP eCLIP17.95■□□□□ 0.46
PCDHA4-203ENST00000530339 STX1AQ16623 288 aa17.95■□□□□ 0.46
PCDHA4-203ENST00000530339 KIAA1328Q86T90 577 aa17.95■□□□□ 0.46
PCDHA4-203ENST00000530339 PIK3R4Q99570 1358 aa17.95■□□□□ 0.46
PCDHA4-203ENST00000530339 SMC5Q8IY18 1101 aa17.95■□□□□ 0.46
PCDHA4-203ENST00000530339 C8orf76Q96K31 380 aa17.95■□□□□ 0.46
PCDHA4-203ENST00000530339 ZHX1Q9UKY1 873 aaPredicted RBP17.95■□□□□ 0.46
PCDHA4-203ENST00000530339 MAP9Q49MG5 647 aa17.94■□□□□ 0.46
PCDHA4-203ENST00000530339 EIF5P55010 431 aaKnown RBP17.94■□□□□ 0.46
PCDHA4-203ENST00000530339 KIF4BQ2VIQ3 1234 aa17.94■□□□□ 0.46
PCDHA4-203ENST00000530339 JAKMIP3Q5VZ66 844 aa17.94■□□□□ 0.46
PCDHA4-203ENST00000530339 TANGO6Q9C0B7 1094 aa17.94■□□□□ 0.46
PCDHA4-203ENST00000530339 RAB3GAP1Q15042 981 aa17.94■□□□□ 0.46
PCDHA4-203ENST00000530339 KDM5BQ9UGL1 1544 aa17.94■□□□□ 0.46
PCDHA4-203ENST00000530339 TMEM132AQ24JP5 1023 aa17.94■□□□□ 0.46
PCDHA4-203ENST00000530339 HMG20BQ9P0W2 317 aa17.94■□□□□ 0.46
PCDHA4-203ENST00000530339 CENPHQ9H3R5 247 aa17.93■□□□□ 0.46
PCDHA4-203ENST00000530339 TFIP11Q9UBB9 837 aaKnown RBP17.93■□□□□ 0.46
PCDHA4-203ENST00000530339 NME9Q86XW9 330 aa17.93■□□□□ 0.46
PCDHA4-203ENST00000530339 FSIP1Q8NA03 581 aa17.93■□□□□ 0.46
PCDHA4-203ENST00000530339 IFIT1P09914 478 aaKnown RBP17.93■□□□□ 0.46
PCDHA4-203ENST00000530339 BMS1Q14692 1282 aaKnown RBP17.93■□□□□ 0.46
PCDHA4-203ENST00000530339 LRP2BPQ9P2M1 347 aa17.93■□□□□ 0.46
PCDHA4-203ENST00000530339 ZSCAN22P10073 491 aaPredicted RBP17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 SDSP20132 328 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 MCM3P25205 808 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 EMILIN1Q9Y6C2 1016 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 SPDYE4A6NLX3 237 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 METTL24Q5JXM2 366 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 WAPLQ7Z5K2 1190 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 RNF41Q9H4P4 317 aaPredicted RBP17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 ECHDC1Q9NTX5 307 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 ARHGEF12Q9NZN5 1544 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 FLIIQ13045 1269 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 SNW1Q13573 536 aaKnown RBP17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 CEP135Q66GS9 1140 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 RAI14Q9P0K7 980 aa17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 POLR3GO15318 223 aaPredicted RBP17.92■□□□□ 0.46
PCDHA4-203ENST00000530339 ANAPC15P60006 121 aa17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 LARP6Q9BRS8 491 aaKnown RBP17.91■□□□□ 0.46
PCDHA4-203ENST00000530339 PHF8Q9UPP1 1060 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms