RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 SLC9A9Q8IVB4 645 aa9.68□□□□□ -0.86
USP47-209ENST00000530041 MBIPQ9NS73 344 aa9.68□□□□□ -0.86
USP47-209ENST00000530041 SFI1A8K8P3 1242 aa9.67□□□□□ -0.86
USP47-209ENST00000530041 UBAP2LQ14157 1087 aaKnown RBP9.67□□□□□ -0.86
USP47-209ENST00000530041 TEAD4Q15561 434 aa9.67□□□□□ -0.86
USP47-209ENST00000530041 CFHR5Q9BXR6 569 aa9.67□□□□□ -0.86
USP47-209ENST00000530041 VRTNQ9H8Y1 702 aa9.67□□□□□ -0.86
USP47-209ENST00000530041 ZDHHC3Q9NYG2 299 aa9.67□□□□□ -0.86
USP47-209ENST00000530041 ADAMTS2O95450 1211 aa9.66□□□□□ -0.86
USP47-209ENST00000530041 PTK7Q13308 1070 aa9.66□□□□□ -0.86
USP47-209ENST00000530041 PARP3Q9Y6F1 533 aa9.66□□□□□ -0.86
USP47-209ENST00000530041 FAM196BA6NMK8 535 aa9.65□□□□□ -0.86
USP47-209ENST00000530041 TATP17735 454 aaPredicted RBP9.65□□□□□ -0.86
USP47-209ENST00000530041 NOS2P35228 1153 aa9.65□□□□□ -0.86
USP47-209ENST00000530041 SEC13P55735 322 aa9.65□□□□□ -0.86
USP47-209ENST00000530041 CRTC2Q53ET0 693 aaPredicted RBP9.65□□□□□ -0.86
USP47-209ENST00000530041 TBCELQ5QJ74 424 aa9.65□□□□□ -0.86
USP47-209ENST00000530041 ZDHHC1Q8WTX9 485 aa9.65□□□□□ -0.86
USP47-209ENST00000530041 L3MBTL2Q969R5 705 aa9.65□□□□□ -0.86
USP47-209ENST00000530041 PHF24Q9UPV7 400 aa9.65□□□□□ -0.86
USP47-209ENST00000530041 NLRP8Q86W28 1048 aa9.64□□□□□ -0.87
USP47-209ENST00000530041 TSEN2Q8NCE0 465 aaKnown RBP9.64□□□□□ -0.87
USP47-209ENST00000530041 TSPAN10Q9H1Z9 355 aaPredicted RBP9.64□□□□□ -0.87
USP47-209ENST00000530041 IGF1RP08069 1367 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L15C9J2P7 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L10C9JJH3 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L13C9JLJ4 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L12C9JPN9 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L11C9JVI0 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L21D6R901 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L18D6R9N7 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L22D6RA61 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L17D6RBQ6 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L19D6RCP7 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L20D6RJB6 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 MX2P20592 715 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 USP17L24Q0WX57 530 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 ARSJQ5FYB0 599 aaPredicted RBP9.63□□□□□ -0.87
USP47-209ENST00000530041 ZNF385CQ66K41 422 aaPredicted RBP9.63□□□□□ -0.87
USP47-209ENST00000530041 FIGNL1Q6PIW4 674 aa9.63□□□□□ -0.87
USP47-209ENST00000530041 ATXN7L1Q9ULK2 861 aaPredicted RBP9.63□□□□□ -0.87
USP47-209ENST00000530041 A0A1W2PNR3 127 aa9.62□□□□□ -0.87
USP47-209ENST00000530041 SERTM1A2A2V5 107 aa9.62□□□□□ -0.87
USP47-209ENST00000530041 TXLNAP40222 546 aa9.62□□□□□ -0.87
USP47-209ENST00000530041 PSMA6P60900 246 aaKnown RBP9.62□□□□□ -0.87
USP47-209ENST00000530041 SVOPQ8N4V2 548 aa9.62□□□□□ -0.87
USP47-209ENST00000530041 WHAMMQ8TF30 809 aa9.62□□□□□ -0.87
USP47-209ENST00000530041 ZIC5Q96T25 663 aa9.62□□□□□ -0.87
USP47-209ENST00000530041 NDFIP2Q9NV92 336 aa9.62□□□□□ -0.87
USP47-209ENST00000530041 ZNF232Q9UNY5 417 aa9.62□□□□□ -0.87
USP47-209ENST00000530041 NSFL1CQ9UNZ2 370 aaKnown RBP9.62□□□□□ -0.87
USP47-209ENST00000530041 DPYDQ12882 1025 aa9.61□□□□□ -0.87
USP47-209ENST00000530041 ANKMY2Q8IV38 441 aa9.61□□□□□ -0.87
USP47-209ENST00000530041 ZCCHC2Q9C0B9 1178 aaKnown RBP9.61□□□□□ -0.87
USP47-209ENST00000530041 CHMP3Q9Y3E7 222 aa9.61□□□□□ -0.87
USP47-209ENST00000530041 EML1O00423 815 aa9.6□□□□□ -0.87
USP47-209ENST00000530041 BNIP3LO60238 219 aa9.6□□□□□ -0.87
USP47-209ENST00000530041 POTEAQ6S8J7 498 aa9.6□□□□□ -0.87
USP47-209ENST00000530041 ABHD17AQ96GS6 310 aa9.6□□□□□ -0.87
USP47-209ENST00000530041 PCDHGC4Q9Y5F7 938 aa9.6□□□□□ -0.87
USP47-209ENST00000530041 C21orf2O43822 256 aa9.59□□□□□ -0.87
USP47-209ENST00000530041 RFX1P22670 979 aa9.59□□□□□ -0.87
USP47-209ENST00000530041 HIRAP54198 1017 aaPredicted RBP9.59□□□□□ -0.87
USP47-209ENST00000530041 SH3PXD2AQ5TCZ1 1133 aa9.59□□□□□ -0.87
USP47-209ENST00000530041 LYPD4Q6UWN0 246 aa9.59□□□□□ -0.87
USP47-209ENST00000530041 BICDL1Q6ZP65 573 aa9.59□□□□□ -0.87
USP47-209ENST00000530041 GAS2L2Q8NHY3 880 aa9.59□□□□□ -0.87
USP47-209ENST00000530041 ARXQ96QS3 562 aa9.59□□□□□ -0.87
USP47-209ENST00000530041 GPC6Q9Y625 555 aaPredicted RBP9.59□□□□□ -0.87
USP47-209ENST00000530041 ATXN7O15265 892 aaPredicted RBP9.58□□□□□ -0.88
USP47-209ENST00000530041 MAP2K3P46734 347 aa9.58□□□□□ -0.88
USP47-209ENST00000530041 STAG2Q8N3U4 1231 aa9.58□□□□□ -0.88
USP47-209ENST00000530041 HINFPQ9BQA5 517 aa9.58□□□□□ -0.88
USP47-209ENST00000530041 GJA3Q9Y6H8 435 aa9.58□□□□□ -0.88
USP47-209ENST00000530041 ATAD2Q6PL18 1390 aa9.58□□□□□ -0.88
USP47-209ENST00000530041 PPP1R12BO60237 982 aaPredicted RBP9.57□□□□□ -0.88
USP47-209ENST00000530041 ARHGEF15O94989 841 aa9.57□□□□□ -0.88
USP47-209ENST00000530041 CELA2BP08218 269 aaPredicted RBP9.57□□□□□ -0.88
USP47-209ENST00000530041 FGFR3P22607 806 aa9.57□□□□□ -0.88
USP47-209ENST00000530041 CDCA8Q53HL2 280 aa9.57□□□□□ -0.88
USP47-209ENST00000530041 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
USP47-209ENST00000530041 C7orf43Q8WVR3 580 aa9.57□□□□□ -0.88
USP47-209ENST00000530041 SCG3Q8WXD2 468 aaKnown RBP9.57□□□□□ -0.88
USP47-209ENST00000530041 MAP3K10Q02779 954 aa9.56□□□□□ -0.88
USP47-209ENST00000530041 SAMD5Q5TGI4 173 aa9.56□□□□□ -0.88
USP47-209ENST00000530041 ACDQ96AP0 544 aa9.56□□□□□ -0.88
USP47-209ENST00000530041 ADAMTS8Q9UP79 889 aa9.56□□□□□ -0.88
USP47-209ENST00000530041 TNP2Q05952 138 aa9.55□□□□□ -0.88
USP47-209ENST00000530041 FAM200AQ8TCP9 573 aa9.55□□□□□ -0.88
USP47-209ENST00000530041 C2orf49Q9BVC5 232 aaPredicted RBP9.55□□□□□ -0.88
USP47-209ENST00000530041 HCN4Q9Y3Q4 1203 aa9.55□□□□□ -0.88
USP47-209ENST00000530041 DCDC2BA2VCK2 349 aa9.54□□□□□ -0.88
USP47-209ENST00000530041 FAM157BP0CG42 384 aa9.54□□□□□ -0.88
USP47-209ENST00000530041 MAPTP10636 758 aaKnown RBP9.54□□□□□ -0.88
USP47-209ENST00000530041 BCRP11274 1271 aa9.54□□□□□ -0.88
USP47-209ENST00000530041 BMP4P12644 408 aa9.54□□□□□ -0.88
USP47-209ENST00000530041 CTBSQ01459 385 aa9.54□□□□□ -0.88
USP47-209ENST00000530041 RHPN1Q8TCX5 695 aa9.54□□□□□ -0.88
USP47-209ENST00000530041 KLRG1Q96E93 195 aa9.54□□□□□ -0.88
USP47-209ENST00000530041 CCDC97Q96F63 343 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms