RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 CCDC50Q8IVM0 306 aa14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 FSD1Q9BTV5 496 aa14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 MPHOSPH9Q99550 1183 aa14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 PFDN4Q9NQP4 134 aa14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 TPX2Q9ULW0 747 aaKnown RBP14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 CCDC69A6NI79 296 aa14.58□□□□□ -0.07
PDE4DIP-227ENST00000529945 ACTN2P35609 894 aa14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 KLHL10Q6JEL2 608 aa14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 ANKRD1Q15327 319 aa14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 VCXQ9H320 206 aa14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 PIBF1Q8WXW3 757 aa14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 SELENOSQ9BQE4 189 aa14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 ZBTB41Q5SVQ8 909 aa14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 SEC62Q99442 399 aaKnown RBP14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 TRIM7Q9C029 511 aa14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 MTUS1Q9ULD2 1270 aa14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 NOL7Q9UMY1 257 aaKnown RBP14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 GCKP35557 465 aa14.58□□□□□ -0.08
PDE4DIP-227ENST00000529945 NOP2P46087 812 aaKnown RBP14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 KIAA0753Q2KHM9 967 aa14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 TSNAXIP1Q2TAA8 658 aa14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 USH1CQ9Y6N9 552 aa14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 TBC1D2BQ9UPU7 963 aa14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 HMGB1P1B2RPK0 211 aaPredicted RBP14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 TDRD12Q587J7 1177 aaKnown RBP14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 VIMP08670 466 aaKnown RBP14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 SNW1Q13573 536 aaKnown RBP14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 CCDC57Q2TAC2 916 aa14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 ZSWIM4Q9H7M6 989 aa14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 RB1CC1Q8TDY2 1594 aa14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 NEDD9Q14511 834 aa14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 LARP1BQ659C4 914 aaKnown RBP14.57□□□□□ -0.08
PDE4DIP-227ENST00000529945 KANK4Q5T7N3 995 aaPredicted RBP14.56□□□□□ -0.08
PDE4DIP-227ENST00000529945 TSG101Q99816 390 aa14.56□□□□□ -0.08
PDE4DIP-227ENST00000529945 SAMD15Q9P1V8 674 aa14.56□□□□□ -0.08
PDE4DIP-227ENST00000529945 TACC3Q9Y6A5 838 aa14.56□□□□□ -0.08
PDE4DIP-227ENST00000529945 AIMP1Q12904 312 aaKnown RBP14.56□□□□□ -0.08
PDE4DIP-227ENST00000529945 POLD1P28340 1107 aa14.56□□□□□ -0.08
PDE4DIP-227ENST00000529945 FMNL3Q8IVF7 1028 aa14.56□□□□□ -0.08
PDE4DIP-227ENST00000529945 PAXBP1Q9Y5B6 917 aa14.56□□□□□ -0.08
PDE4DIP-227ENST00000529945 TEFQ10587 303 aa14.56□□□□□ -0.08
PDE4DIP-227ENST00000529945 MAFGO15525 162 aa14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 ZNF76P36508 570 aa14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 RAP1GDS1P52306 607 aa14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 HIP1O00291 1037 aa14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 PSMD6Q15008 389 aa14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 VPS18Q9P253 973 aa14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 CCDC171Q6TFL3 1326 aa14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 FKBP5Q13451 457 aaPredicted RBP14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 IFT74Q96LB3 600 aa14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 LRRC23Q53EV4 343 aaPredicted RBP14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 SNX16P57768 344 aa14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 GBP5Q96PP8 586 aa14.55□□□□□ -0.08
PDE4DIP-227ENST00000529945 KRBA2Q6ZNG9 492 aa14.54□□□□□ -0.08
PDE4DIP-227ENST00000529945 L3MBTL2Q969R5 705 aa14.54□□□□□ -0.08
PDE4DIP-227ENST00000529945 FGFR1OPO95684 399 aaKnown RBP14.54□□□□□ -0.08
PDE4DIP-227ENST00000529945 RASAL2Q9UJF2 1139 aa14.54□□□□□ -0.08
PDE4DIP-227ENST00000529945 LRRC45Q96CN5 670 aa14.54□□□□□ -0.08
PDE4DIP-227ENST00000529945 CCDC129Q6ZRS4 1044 aa14.54□□□□□ -0.08
PDE4DIP-227ENST00000529945 PHLDB2Q86SQ0 1253 aa14.54□□□□□ -0.08
PDE4DIP-227ENST00000529945 BAG1Q99933 345 aaPredicted RBP14.54□□□□□ -0.08
PDE4DIP-227ENST00000529945 SF3B2Q13435 895 aaKnown RBP14.54□□□□□ -0.08
PDE4DIP-227ENST00000529945 KLHL34Q8N239 644 aa14.54□□□□□ -0.08
PDE4DIP-227ENST00000529945 TXNDC9O14530 226 aa14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 MAP2K2P36507 400 aa14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 YEATS4O95619 227 aa14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 SYTL4Q96C24 671 aaPredicted RBP14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 CYP46A1Q9Y6A2 500 aa14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 ATP6V1E1P36543 226 aa14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 RPAINQ86UA6 219 aa14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 GKAP1Q5VSY0 366 aaPredicted RBP14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 VPS52Q8N1B4 723 aa14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 FRMD4BQ9Y2L6 1034 aa14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 INTS8Q75QN2 995 aaKnown RBP14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.53□□□□□ -0.08
PDE4DIP-227ENST00000529945 PEX19P40855 299 aa14.52□□□□□ -0.08
PDE4DIP-227ENST00000529945 SPECC1L-ADORA2AF8WAN1 911 aa14.52□□□□□ -0.08
PDE4DIP-227ENST00000529945 MRPL46Q9H2W6 279 aaKnown RBP14.52□□□□□ -0.08
PDE4DIP-227ENST00000529945 EVA1CP58658 441 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 UBA5Q9GZZ9 404 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 CEP131Q9UPN4 1083 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 CDKL5O76039 1030 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 TMEM87AQ8NBN3 555 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 SLMAPQ14BN4 828 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 GEN1Q17RS7 908 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 NGDNQ8NEJ9 315 aaKnown RBP14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 TRIM4Q9C037 500 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 MYH10P35580 1976 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 SKOR1P84550 965 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 RBBP5Q15291 538 aaKnown RBP14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 CCDC38Q502W7 563 aa14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 ARHGEF2Q92974 986 aaKnown RBP14.52□□□□□ -0.09
PDE4DIP-227ENST00000529945 MRFAP1L1Q96HT8 127 aa14.51□□□□□ -0.09
PDE4DIP-227ENST00000529945 TERF1P54274 439 aa14.51□□□□□ -0.09
PDE4DIP-227ENST00000529945 ANKRD24Q8TF21 1146 aa14.51□□□□□ -0.09
PDE4DIP-227ENST00000529945 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
PDE4DIP-227ENST00000529945 CCDC12Q8WUD4 166 aaPredicted RBP14.51□□□□□ -0.09
PDE4DIP-227ENST00000529945 USP6NLQ92738 828 aa14.51□□□□□ -0.09
PDE4DIP-227ENST00000529945 ZBTB9Q96C00 473 aa14.51□□□□□ -0.09
PDE4DIP-227ENST00000529945 NUCKS1Q9H1E3 243 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms